data_PN5 # _chem_comp.id PN5 _chem_comp.name "(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl 2,2-dimethylpropanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type ? _chem_comp.formula "C16 H30 N2 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-05-19 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.485 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PN5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2VU2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PN5 CP2 CP2 C 0 1 N N N 24.382 -16.547 12.802 7.934 -1.230 0.673 CP2 PN5 1 PN5 CP3 CP3 C 0 1 N N N 24.513 -15.969 14.208 6.916 -0.496 -0.201 CP3 PN5 2 PN5 NP4 NP4 N 0 1 N N N 25.405 -16.867 14.939 5.636 -0.411 0.506 NP4 PN5 3 PN5 CP5 CP5 C 0 1 N N N 25.072 -17.674 15.937 4.583 0.198 -0.076 CP5 PN5 4 PN5 OP5 OP5 O 0 1 N N N 23.929 -17.755 16.369 4.696 0.675 -1.185 OP5 PN5 5 PN5 CP6 CP6 C 0 1 N N N 26.199 -18.511 16.507 3.267 0.285 0.652 CP6 PN5 6 PN5 CP7 CP7 C 0 1 N N N 26.760 -17.884 17.775 2.248 1.019 -0.223 CP7 PN5 7 PN5 NP8 NP8 N 0 1 N N N 26.278 -18.662 18.906 0.968 1.104 0.485 NP8 PN5 8 PN5 CP9 CP9 C 0 1 N N N 26.945 -19.008 20.007 -0.084 1.713 -0.097 CP9 PN5 9 PN5 OP9 OP9 O 0 1 N N N 28.119 -18.720 20.202 0.052 2.271 -1.165 OP9 PN5 10 PN5 CPA CPA C 0 1 N N R 26.143 -19.815 20.996 -1.431 1.700 0.580 CPA PN5 11 PN5 OPA OPA O 0 1 N N N 24.808 -19.293 21.021 -1.284 1.235 1.923 OPA PN5 12 PN5 CPB CPB C 0 1 N N N 26.689 -19.784 22.425 -2.375 0.768 -0.182 CPB PN5 13 PN5 CPE CPE C 0 1 N N N 26.876 -18.338 22.859 -2.650 1.346 -1.572 CPE PN5 14 PN5 CPD CPD C 0 1 N N N 25.704 -20.469 23.369 -1.729 -0.611 -0.322 CPD PN5 15 PN5 CPC CPC C 0 1 N N N 28.008 -20.562 22.495 -3.693 0.639 0.585 CPC PN5 16 PN5 OA6 OA6 O 0 1 N N N 29.101 -19.692 22.794 -4.589 -0.245 -0.138 OA6 PN5 17 PN5 CT1 CT1 C 0 1 N N N 29.464 -19.386 24.171 -5.797 -0.466 0.405 CT1 PN5 18 PN5 OT1 OT1 O 0 1 N N N 28.688 -19.680 25.074 -6.094 0.061 1.451 OT1 PN5 19 PN5 CT2 CT2 C 0 1 N N N 30.772 -18.702 24.462 -6.781 -1.373 -0.289 CT2 PN5 20 PN5 CT5 CT5 C 0 1 N N N 31.789 -19.767 24.862 -6.176 -2.771 -0.427 CT5 PN5 21 PN5 CT3 CT3 C 0 1 N N N 30.564 -17.714 25.606 -8.068 -1.453 0.534 CT3 PN5 22 PN5 CT4 CT4 C 0 1 N N N 31.214 -17.962 23.203 -7.097 -0.814 -1.677 CT4 PN5 23 PN5 SP1 SP1 S 0 1 N N N 22.840 -17.479 12.637 9.519 -1.335 -0.203 SP1 PN5 24 PN5 HP21 1HP2 H 0 0 N N N 24.384 -15.723 12.073 8.071 -0.684 1.607 HP21 PN5 25 PN5 HP22 2HP2 H 0 0 N N N 25.228 -17.225 12.617 7.571 -2.234 0.890 HP22 PN5 26 PN5 HP31 1HP3 H 0 0 N N N 24.934 -14.953 14.170 7.279 0.508 -0.417 HP31 PN5 27 PN5 HP32 2HP3 H 0 0 N N N 23.532 -15.893 14.701 6.779 -1.042 -1.135 HP32 PN5 28 PN5 HP1 HP1 H 0 1 N N N 22.340 -17.703 13.816 10.304 -1.992 0.670 HP1 PN5 29 PN5 HP4 HP4 H 0 1 N N N 26.365 -16.873 14.658 5.546 -0.793 1.393 HP4 PN5 30 PN5 HP61 1HP6 H 0 0 N N N 25.814 -19.514 16.745 2.903 -0.720 0.868 HP61 PN5 31 PN5 HP62 2HP6 H 0 0 N N N 27.004 -18.570 15.760 3.403 0.831 1.586 HP62 PN5 32 PN5 HP71 1HP7 H 0 0 N N N 27.860 -17.899 17.748 2.612 2.023 -0.439 HP71 PN5 33 PN5 HP72 2HP7 H 0 0 N N N 26.433 -16.837 17.862 2.112 0.473 -1.156 HP72 PN5 34 PN5 HP8 HP8 H 0 1 N N N 25.330 -18.976 18.851 0.878 0.722 1.372 HP8 PN5 35 PN5 HPA HPA H 0 1 N N N 26.191 -20.861 20.660 -1.843 2.708 0.587 HPA PN5 36 PN5 HA HA H 0 1 N N N 24.529 -19.178 21.922 -0.922 0.341 1.993 HA PN5 37 PN5 HPD1 1HPD H 0 0 N N N 26.185 -20.634 24.345 -0.790 -0.519 -0.869 HPD1 PN5 38 PN5 HPD2 2HPD H 0 0 N N N 24.818 -19.831 23.500 -1.533 -1.023 0.668 HPD2 PN5 39 PN5 HPD3 3HPD H 0 0 N N N 25.400 -21.436 22.942 -2.402 -1.275 -0.865 HPD3 PN5 40 PN5 HPE1 1HPE H 0 0 N N N 26.921 -18.287 23.957 -3.383 0.724 -2.086 HPE1 PN5 41 PN5 HPE2 2HPE H 0 0 N N N 27.812 -17.946 22.435 -3.038 2.359 -1.474 HPE2 PN5 42 PN5 HPE3 3HPE H 0 0 N N N 26.030 -17.735 22.499 -1.724 1.365 -2.147 HPE3 PN5 43 PN5 HPC1 1HPC H 0 0 N N N 27.932 -21.324 23.284 -3.497 0.227 1.575 HPC1 PN5 44 PN5 HPC2 2HPC H 0 0 N N N 28.191 -21.032 21.517 -4.153 1.621 0.684 HPC2 PN5 45 PN5 HT31 1HT3 H 0 0 N N N 30.514 -18.261 26.559 -8.499 -0.456 0.633 HT31 PN5 46 PN5 HT32 2HT3 H 0 0 N N N 31.404 -17.004 25.634 -8.780 -2.108 0.033 HT32 PN5 47 PN5 HT33 3HT3 H 0 0 N N N 29.624 -17.164 25.449 -7.843 -1.851 1.524 HT33 PN5 48 PN5 HT41 1HT4 H 0 0 N N N 31.320 -16.890 23.425 -6.180 -0.757 -2.263 HT41 PN5 49 PN5 HT42 2HT4 H 0 0 N N N 32.180 -18.363 22.862 -7.809 -1.470 -2.179 HT42 PN5 50 PN5 HT43 3HT4 H 0 0 N N N 30.460 -18.099 22.414 -7.528 0.182 -1.579 HT43 PN5 51 PN5 HT51 1HT5 H 0 0 N N N 32.034 -20.388 23.988 -5.951 -3.169 0.563 HT51 PN5 52 PN5 HT52 2HT5 H 0 0 N N N 32.703 -19.280 25.233 -6.888 -3.427 -0.929 HT52 PN5 53 PN5 HT53 3HT5 H 0 0 N N N 31.363 -20.401 25.654 -5.259 -2.714 -1.013 HT53 PN5 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PN5 CP2 CP3 SING N N 1 PN5 CP2 SP1 SING N N 2 PN5 CP3 NP4 SING N N 3 PN5 NP4 CP5 SING N N 4 PN5 CP5 OP5 DOUB N N 5 PN5 CP5 CP6 SING N N 6 PN5 CP6 CP7 SING N N 7 PN5 CP7 NP8 SING N N 8 PN5 NP8 CP9 SING N N 9 PN5 CP9 OP9 DOUB N N 10 PN5 CP9 CPA SING N N 11 PN5 OPA CPA SING N N 12 PN5 CPB CPD SING N N 13 PN5 CPB CPE SING N N 14 PN5 CPB CPC SING N N 15 PN5 CPB CPA SING N N 16 PN5 CPC OA6 SING N N 17 PN5 OA6 CT1 SING N N 18 PN5 CT1 OT1 DOUB N N 19 PN5 CT1 CT2 SING N N 20 PN5 CT2 CT3 SING N N 21 PN5 CT2 CT4 SING N N 22 PN5 CT2 CT5 SING N N 23 PN5 CP2 HP21 SING N N 24 PN5 CP2 HP22 SING N N 25 PN5 CP3 HP31 SING N N 26 PN5 CP3 HP32 SING N N 27 PN5 SP1 HP1 SING N N 28 PN5 NP4 HP4 SING N N 29 PN5 CP6 HP61 SING N N 30 PN5 CP6 HP62 SING N N 31 PN5 CP7 HP71 SING N N 32 PN5 CP7 HP72 SING N N 33 PN5 NP8 HP8 SING N N 34 PN5 CPA HPA SING N N 35 PN5 OPA HA SING N N 36 PN5 CPD HPD1 SING N N 37 PN5 CPD HPD2 SING N N 38 PN5 CPD HPD3 SING N N 39 PN5 CPE HPE1 SING N N 40 PN5 CPE HPE2 SING N N 41 PN5 CPE HPE3 SING N N 42 PN5 CPC HPC1 SING N N 43 PN5 CPC HPC2 SING N N 44 PN5 CT3 HT31 SING N N 45 PN5 CT3 HT32 SING N N 46 PN5 CT3 HT33 SING N N 47 PN5 CT4 HT41 SING N N 48 PN5 CT4 HT42 SING N N 49 PN5 CT4 HT43 SING N N 50 PN5 CT5 HT51 SING N N 51 PN5 CT5 HT52 SING N N 52 PN5 CT5 HT53 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PN5 SMILES ACDLabs 10.04 "O=C(NCCS)CCNC(=O)C(O)C(C)(C)COC(=O)C(C)(C)C" PN5 SMILES_CANONICAL CACTVS 3.341 "CC(C)(C)C(=O)OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)NCCS" PN5 SMILES CACTVS 3.341 "CC(C)(C)C(=O)OCC(C)(C)[CH](O)C(=O)NCCC(=O)NCCS" PN5 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)(C)C(=O)OCC(C)(C)[C@H](C(=O)NCCC(=O)NCCS)O" PN5 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(C)C(=O)OCC(C)(C)C(C(=O)NCCC(=O)NCCS)O" PN5 InChI InChI 1.03 "InChI=1S/C16H30N2O5S/c1-15(2,3)14(22)23-10-16(4,5)12(20)13(21)18-7-6-11(19)17-8-9-24/h12,20,24H,6-10H2,1-5H3,(H,17,19)(H,18,21)/t12-/m0/s1" PN5 InChIKey InChI 1.03 KVQSHCZSRKQWCB-LBPRGKRZSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PN5 "SYSTEMATIC NAME" ACDLabs 10.04 "(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl 2,2-dimethylpropanoate" PN5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-[[3-oxo-3-(2-sulfanylethylamino)propyl]amino]butyl] 2,2-dimethylpropanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PN5 "Create component" 2008-05-19 EBI PN5 "Modify descriptor" 2011-06-04 RCSB #