data_PP8
#
_chem_comp.id PP8
_chem_comp.name "2-[(1R)-1-(N-(3-METHYLBUTANOYL)-L-VALYL-L-ASPARAGINYL)-AMINO)-3-METHYLBUTYL]HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOIC ACID METHYLESTER"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H47 N4 O9 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 626.679
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PP8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BXQ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PP8 NV2 NV2 N 0 1 N N N 17.832 5.286 18.419 -0.414 -0.252 -6.066 NV2 PP8 1
PP8 CV1 CV1 C 0 1 N N N 15.912 4.005 17.570 0.400 -1.067 -8.255 CV1 PP8 2
PP8 CV6 CV6 C 0 1 N N S 19.079 5.607 19.068 -0.233 0.488 -4.815 CV6 PP8 3
PP8 CV2 CV2 C 0 1 N N N 14.632 3.811 18.376 1.676 -0.970 -9.094 CV2 PP8 4
PP8 CV7 CV7 C 0 1 N N N 20.303 5.553 18.168 -0.677 1.939 -5.012 CV7 PP8 5
PP8 CV3 CV3 C 0 1 N N N 14.471 4.939 19.382 1.487 -1.743 -10.400 CV3 PP8 6
PP8 CV8 CV8 C 0 1 N N N 20.504 4.189 17.524 -2.178 1.977 -5.305 CV8 PP8 7
PP8 CV4 CV4 C 0 1 N N N 13.443 3.834 17.401 1.969 0.498 -9.408 CV4 PP8 8
PP8 CV9 CV9 C 0 1 N N N 20.363 6.644 17.118 -0.384 2.739 -3.741 CV9 PP8 9
PP8 CV5 CV5 C 0 1 N N N 17.108 4.191 18.511 0.586 -0.305 -6.968 CV5 PP8 10
PP8 CR CR C 0 1 N N N 18.950 7.001 19.711 -1.064 -0.148 -3.730 CR PP8 11
PP8 OV1 OV1 O 0 1 N N N 17.469 3.309 19.293 1.635 0.259 -6.743 OV1 PP8 12
PP8 OV2 OV2 O 0 1 N N N 18.099 7.814 19.364 -2.072 -0.757 -4.018 OV2 PP8 13
PP8 N1 N1 N 0 1 N N N 19.837 7.235 20.684 -0.686 -0.040 -2.441 N1 PP8 14
PP8 C1 C1 C 0 1 N N S 19.816 8.420 21.528 -1.478 -0.682 -1.389 C1 PP8 15
PP8 C2 C2 C 0 1 N N N 18.967 8.287 22.754 -1.048 -2.143 -1.248 C2 PP8 16
PP8 C4 C4 C 0 1 N N N 18.943 9.457 23.721 0.412 -2.204 -0.884 C4 PP8 17
PP8 O2 O2 O 0 1 N N N 18.823 9.103 24.917 1.039 -1.179 -0.719 O2 PP8 18
PP8 N2 N2 N 0 1 N N N 19.048 10.738 23.423 1.022 -3.398 -0.742 N2 PP8 19
PP8 C3 C3 C 0 1 N N N 21.263 8.813 21.781 -1.255 0.035 -0.083 C3 PP8 20
PP8 O1 O1 O 0 1 N N N 21.828 8.458 22.811 -0.508 0.989 -0.036 O1 PP8 21
PP8 NL NL N 0 1 N N N 21.859 9.501 20.802 -1.886 -0.382 1.031 NL PP8 22
PP8 CAL CAL C 0 1 N N R 23.241 9.921 20.738 -1.669 0.315 2.301 CAL PP8 23
PP8 CBL CBL C 0 1 N N N 23.985 9.403 19.515 -2.928 0.206 3.164 CBL PP8 24
PP8 CGL CGL C 0 1 N N N 23.719 7.947 19.175 -4.100 0.875 2.443 CGL PP8 25
PP8 CL1 CL1 C 0 1 N N N 24.401 7.533 17.885 -5.375 0.696 3.269 CL1 PP8 26
PP8 CL2 CL2 C 0 1 N N N 24.164 7.013 20.300 -3.808 2.367 2.271 CL2 PP8 27
PP8 P P P 0 1 N N S 23.401 11.697 20.941 -0.263 -0.443 3.179 P PP8 28
PP8 O3 O3 O 0 1 N N N 22.463 12.334 19.993 0.968 -0.272 2.377 O3 PP8 29
PP8 O4 O4 O 0 1 N N N 24.844 12.081 20.815 -0.549 -2.012 3.396 O4 PP8 30
PP8 O5 O5 O 0 1 N N N 22.922 12.006 22.399 -0.075 0.270 4.610 O5 PP8 31
PP8 C5 C5 C 0 1 N N S 23.563 12.960 23.166 1.055 -0.342 5.232 C5 PP8 32
PP8 C6 C6 C 0 1 N N N 22.563 14.009 23.743 2.074 0.733 5.611 C6 PP8 33
PP8 C7 C7 C 0 1 N N N 25.464 12.853 26.370 1.052 -2.543 8.344 C7 PP8 34
PP8 CE2 CE2 C 0 1 Y N N 21.650 13.574 24.872 2.518 1.464 4.370 CE2 PP8 35
PP8 CZ CZ C 0 1 Y N N 21.330 14.461 25.896 1.834 2.588 3.948 CZ PP8 36
PP8 CD2 CD2 C 0 1 Y N N 21.121 12.300 24.910 3.614 1.012 3.657 CD2 PP8 37
PP8 CE1 CE1 C 0 1 Y N N 20.496 14.063 26.927 2.242 3.258 2.809 CE1 PP8 38
PP8 CD1 CD1 C 0 1 Y N N 20.014 12.762 26.884 3.334 2.804 2.094 CD1 PP8 39
PP8 CG CG C 0 1 Y N N 20.284 11.820 25.895 4.019 1.680 2.517 CG PP8 40
PP8 CT CT C 0 1 N N N 24.324 12.379 24.379 0.610 -1.072 6.473 CT PP8 41
PP8 OT1 OT1 O 0 1 N N N 24.747 13.227 25.211 1.481 -1.839 7.149 OT1 PP8 42
PP8 OT2 OT2 O 0 1 N N N 24.426 11.147 24.514 -0.529 -0.968 6.860 OT2 PP8 43
PP8 HNV2 2HNV H 0 0 N N N 17.384 5.948 17.785 -1.253 -0.703 -6.245 HNV2 PP8 44
PP8 HV11 1HV1 H 0 0 N N N 16.077 3.174 16.845 0.191 -2.113 -8.031 HV11 PP8 45
PP8 HV12 2HV1 H 0 0 N N N 15.821 4.843 16.840 -0.434 -0.641 -8.812 HV12 PP8 46
PP8 HV6 HV6 H 0 1 N N N 19.254 4.815 19.833 0.817 0.465 -4.528 HV6 PP8 47
PP8 HV2 HV2 H 0 1 N N N 14.675 2.841 18.924 2.510 -1.396 -8.536 HV2 PP8 48
PP8 HV7 HV7 H 0 1 N N N 21.149 5.741 18.868 -0.132 2.374 -5.849 HV7 PP8 49
PP8 HV31 1HV3 H 0 0 N N N 13.535 4.797 19.971 2.396 -1.674 -10.998 HV31 PP8 50
PP8 HV32 2HV3 H 0 0 N N N 15.365 5.042 20.039 1.278 -2.789 -10.177 HV32 PP8 51
PP8 HV33 3HV3 H 0 0 N N N 14.508 5.941 18.894 0.653 -1.317 -10.957 HV33 PP8 52
PP8 HV81 1HV8 H 0 0 N N N 21.401 4.149 16.863 -2.494 3.011 -5.445 HV81 PP8 53
PP8 HV82 2HV8 H 0 0 N N N 20.540 3.385 18.295 -2.387 1.407 -6.210 HV82 PP8 54
PP8 HV83 3HV8 H 0 0 N N N 19.589 3.869 16.972 -2.723 1.541 -4.467 HV83 PP8 55
PP8 HV41 1HV4 H 0 0 N N N 12.507 3.692 17.990 1.135 0.924 -9.965 HV41 PP8 56
PP8 HV42 2HV4 H 0 0 N N N 13.420 4.754 16.772 2.104 1.049 -8.477 HV42 PP8 57
PP8 HV43 3HV4 H 0 0 N N N 13.548 3.091 16.576 2.878 0.567 -10.005 HV43 PP8 58
PP8 HV91 1HV9 H 0 0 N N N 21.260 6.604 16.457 -0.972 2.337 -2.916 HV91 PP8 59
PP8 HV92 2HV9 H 0 0 N N N 19.431 6.643 16.505 0.676 2.665 -3.502 HV92 PP8 60
PP8 HV93 3HV9 H 0 0 N N N 20.278 7.647 17.596 -0.649 3.784 -3.901 HV93 PP8 61
PP8 HN1 HN1 H 0 1 N N N 20.538 6.500 20.783 0.109 0.463 -2.210 HN1 PP8 62
PP8 H1 H1 H 0 1 N N N 19.298 9.256 21.002 -2.535 -0.638 -1.652 H1 PP8 63
PP8 H21 1H2 H 0 1 N N N 17.923 8.035 22.453 -1.638 -2.621 -0.465 H21 PP8 64
PP8 H22 2H2 H 0 1 N N N 19.255 7.360 23.303 -1.210 -2.663 -2.192 H22 PP8 65
PP8 HN21 1HN2 H 0 0 N N N 19.145 11.026 22.449 1.963 -3.437 -0.508 HN21 PP8 66
PP8 HN22 2HN2 H 0 0 N N N 19.031 11.524 24.072 0.521 -4.217 -0.874 HN22 PP8 67
PP8 HNL HNL H 0 1 N N N 21.210 9.722 20.046 -2.483 -1.146 0.993 HNL PP8 68
PP8 HAL HAL H 0 1 N N N 23.748 9.439 21.605 -1.452 1.365 2.106 HAL PP8 69
PP8 HBL1 1HBL H 0 0 N N N 23.773 10.050 18.632 -3.160 -0.844 3.337 HBL1 PP8 70
PP8 HBL2 2HBL H 0 0 N N N 25.080 9.579 19.626 -2.757 0.703 4.119 HBL2 PP8 71
PP8 HGL HGL H 0 1 N N N 22.615 7.857 19.043 -4.234 0.416 1.464 HGL PP8 72
PP8 HL11 1HL1 H 0 0 N N N 24.205 6.464 17.635 -6.210 1.173 2.755 HL11 PP8 73
PP8 HL12 2HL1 H 0 0 N N N 24.115 8.204 17.042 -5.583 -0.366 3.392 HL12 PP8 74
PP8 HL13 3HL1 H 0 0 N N N 25.494 7.748 17.917 -5.241 1.156 4.248 HL13 PP8 75
PP8 HL21 1HL2 H 0 0 N N N 23.968 5.944 20.050 -3.568 2.804 3.240 HL21 PP8 76
PP8 HL22 2HL2 H 0 0 N N N 25.233 7.179 20.567 -2.963 2.496 1.595 HL22 PP8 77
PP8 HL23 3HL2 H 0 0 N N N 23.696 7.295 21.271 -4.685 2.863 1.856 HL23 PP8 78
PP8 HO4 HO4 H 0 1 N N N 24.928 13.021 20.922 -1.358 -2.079 3.921 HO4 PP8 79
PP8 H5 H5 H 0 1 N N N 24.286 13.425 22.457 1.512 -1.048 4.539 H5 PP8 80
PP8 H61 1H6 H 0 1 N N N 23.127 14.917 24.058 1.616 1.439 6.304 H61 PP8 81
PP8 H62 2H6 H 0 1 N N N 21.945 14.421 22.911 2.936 0.265 6.086 H62 PP8 82
PP8 H71 1H7 H 0 1 N N N 25.838 13.602 27.105 1.890 -3.109 8.752 H71 PP8 83
PP8 H72 2H7 H 0 1 N N N 24.844 12.112 26.927 0.706 -1.822 9.085 H72 PP8 84
PP8 H73 3H7 H 0 1 N N N 26.333 12.234 26.045 0.240 -3.225 8.093 H73 PP8 85
PP8 HZ HZ H 0 1 N N N 21.739 15.485 25.890 0.981 2.943 4.507 HZ PP8 86
PP8 HD2 HD2 H 0 1 N N N 21.387 11.612 24.089 4.148 0.134 3.988 HD2 PP8 87
PP8 HE1 HE1 H 0 1 N N N 20.227 14.751 27.745 1.707 4.136 2.479 HE1 PP8 88
PP8 HD1 HD1 H 0 1 N N N 19.356 12.447 27.711 3.652 3.327 1.204 HD1 PP8 89
PP8 HG HG H 0 1 N N N 19.875 10.795 25.892 4.871 1.325 1.957 HG PP8 90
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PP8 NV2 CV6 SING N N 1
PP8 NV2 CV5 SING N N 2
PP8 NV2 HNV2 SING N N 3
PP8 CV1 CV2 SING N N 4
PP8 CV1 CV5 SING N N 5
PP8 CV1 HV11 SING N N 6
PP8 CV1 HV12 SING N N 7
PP8 CV6 CV7 SING N N 8
PP8 CV6 CR SING N N 9
PP8 CV6 HV6 SING N N 10
PP8 CV2 CV3 SING N N 11
PP8 CV2 CV4 SING N N 12
PP8 CV2 HV2 SING N N 13
PP8 CV7 CV8 SING N N 14
PP8 CV7 CV9 SING N N 15
PP8 CV7 HV7 SING N N 16
PP8 CV3 HV31 SING N N 17
PP8 CV3 HV32 SING N N 18
PP8 CV3 HV33 SING N N 19
PP8 CV8 HV81 SING N N 20
PP8 CV8 HV82 SING N N 21
PP8 CV8 HV83 SING N N 22
PP8 CV4 HV41 SING N N 23
PP8 CV4 HV42 SING N N 24
PP8 CV4 HV43 SING N N 25
PP8 CV9 HV91 SING N N 26
PP8 CV9 HV92 SING N N 27
PP8 CV9 HV93 SING N N 28
PP8 CV5 OV1 DOUB N N 29
PP8 CR OV2 DOUB N N 30
PP8 CR N1 SING N N 31
PP8 N1 C1 SING N N 32
PP8 N1 HN1 SING N N 33
PP8 C1 C2 SING N N 34
PP8 C1 C3 SING N N 35
PP8 C1 H1 SING N N 36
PP8 C2 C4 SING N N 37
PP8 C2 H21 SING N N 38
PP8 C2 H22 SING N N 39
PP8 C4 O2 DOUB N N 40
PP8 C4 N2 SING N N 41
PP8 N2 HN21 SING N N 42
PP8 N2 HN22 SING N N 43
PP8 C3 O1 DOUB N N 44
PP8 C3 NL SING N N 45
PP8 NL CAL SING N N 46
PP8 NL HNL SING N N 47
PP8 CAL CBL SING N N 48
PP8 CAL P SING N N 49
PP8 CAL HAL SING N N 50
PP8 CBL CGL SING N N 51
PP8 CBL HBL1 SING N N 52
PP8 CBL HBL2 SING N N 53
PP8 CGL CL1 SING N N 54
PP8 CGL CL2 SING N N 55
PP8 CGL HGL SING N N 56
PP8 CL1 HL11 SING N N 57
PP8 CL1 HL12 SING N N 58
PP8 CL1 HL13 SING N N 59
PP8 CL2 HL21 SING N N 60
PP8 CL2 HL22 SING N N 61
PP8 CL2 HL23 SING N N 62
PP8 P O3 DOUB N N 63
PP8 P O4 SING N N 64
PP8 P O5 SING N N 65
PP8 O4 HO4 SING N N 66
PP8 O5 C5 SING N N 67
PP8 C5 C6 SING N N 68
PP8 C5 CT SING N N 69
PP8 C5 H5 SING N N 70
PP8 C6 CE2 SING N N 71
PP8 C6 H61 SING N N 72
PP8 C6 H62 SING N N 73
PP8 C7 OT1 SING N N 74
PP8 C7 H71 SING N N 75
PP8 C7 H72 SING N N 76
PP8 C7 H73 SING N N 77
PP8 CE2 CZ DOUB Y N 78
PP8 CE2 CD2 SING Y N 79
PP8 CZ CE1 SING Y N 80
PP8 CZ HZ SING N N 81
PP8 CD2 CG DOUB Y N 82
PP8 CD2 HD2 SING N N 83
PP8 CE1 CD1 DOUB Y N 84
PP8 CE1 HE1 SING N N 85
PP8 CD1 CG SING Y N 86
PP8 CD1 HD1 SING N N 87
PP8 CG HG SING N N 88
PP8 CT OT1 SING N N 89
PP8 CT OT2 DOUB N N 90
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PP8 SMILES ACDLabs 10.04 "O=C(NC(C(=O)NC(C(=O)NC(CC(C)C)P(=O)(OC(C(=O)OC)Cc1ccccc1)O)CC(=O)N)C(C)C)CC(C)C"
PP8 SMILES_CANONICAL CACTVS 3.341 "COC(=O)[C@H](Cc1ccccc1)O[P@](O)(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](NC(=O)CC(C)C)C(C)C"
PP8 SMILES CACTVS 3.341 "COC(=O)[CH](Cc1ccccc1)O[P](O)(=O)[CH](CC(C)C)NC(=O)[CH](CC(N)=O)NC(=O)[CH](NC(=O)CC(C)C)C(C)C"
PP8 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)C[C@H](NC(=O)[C@H](CC(=O)N)NC(=O)[C@H](C(C)C)NC(=O)CC(C)C)[P@](=O)(O)O[C@@H](Cc1ccccc1)C(=O)OC"
PP8 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)CC(NC(=O)C(CC(=O)N)NC(=O)C(C(C)C)NC(=O)CC(C)C)P(=O)(O)OC(Cc1ccccc1)C(=O)OC"
PP8 InChI InChI 1.03
"InChI=1S/C29H47N4O9P/c1-17(2)13-24(35)32-26(19(5)6)28(37)31-21(16-23(30)34)27(36)33-25(14-18(3)4)43(39,40)42-22(29(38)41-7)15-20-11-9-8-10-12-20/h8-12,17-19,21-22,25-26H,13-16H2,1-7H3,(H2,30,34)(H,31,37)(H,32,35)(H,33,36)(H,39,40)/t21-,22-,25+,26-/m0/s1"
PP8 InChIKey InChI 1.03 SGKZZKPYLILTJX-RLBRRGQKSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PP8 "SYSTEMATIC NAME" ACDLabs 10.04 "N-(3-methylbutanoyl)-L-valyl-N~1~-{(1R)-1-[(S)-[(1S)-1-benzyl-2-methoxy-2-oxoethoxy](hydroxy)phosphoryl]-3-methylbutyl}-L-aspartamide"
PP8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R)-1-[[(2S)-4-amino-2-[[(2S)-3-methyl-2-(3-methylbutanoylamino)butanoyl]amino]-4-oxo-butanoyl]amino]-3-methyl-butyl]-[(2S)-1-methoxy-1-oxo-3-phenyl-propan-2-yl]oxy-phosphinic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PP8 "Create component" 1999-07-08 RCSB
PP8 "Modify descriptor" 2011-06-04 RCSB
#