data_PSF
#

_chem_comp.id                                   PSF
_chem_comp.name                                 "1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H34 N O10 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        PHOSPHATIDYLSERINE
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2000-01-12
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       455.437
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PSF
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1DSY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PSF  O2    O2    O  0  1  N  N  N  16.368  27.065   9.672   3.938   -8.474   5.875  O2    PSF   1  
PSF  O1    O1    O  0  1  N  N  N  17.213  28.475   7.934   4.810   -7.227   3.847  O1    PSF   2  
PSF  P     P     P  0  1  N  N  R  16.159  28.288   8.919   5.297   -8.205   5.042  P     PSF   3  
PSF  O4    O4    O  0  1  N  N  N  14.879  28.218   8.222   6.454   -7.693   5.852  O4    PSF   4  
PSF  O3    O3    O  0  1  N  N  N  16.131  29.428   9.887   5.577   -9.625   4.316  O3    PSF   5  
PSF  C2    C2    C  0  1  N  N  N  15.253  26.397  10.307   2.801   -8.960   5.170  C2    PSF   6  
PSF  C3    C3    C  0  1  N  N  N  16.128  25.369  10.915   1.635   -9.144   6.134  C3    PSF   7  
PSF  O11   O11   O  0  1  N  N  N  16.440  26.182  12.219   1.348   -7.888   6.752  O11   PSF   8  
PSF  O12   O12   O  0  1  N  N  N  17.464  28.154  12.902   0.917   -6.964   4.683  O12   PSF   9  
PSF  C1    C1    C  0  1  N  N  N  17.492  26.922  12.386   1.000   -6.877   5.901  C1    PSF  10  
PSF  C4    C4    C  0  1  N  N  N  16.807  24.035  10.268   1.973  -10.143   7.233  C4    PSF  11  
PSF  C5    C5    C  0  1  N  N  N  16.802  22.098   8.494   1.016  -11.120   9.164  C5    PSF  12  
PSF  O51   O51   O  0  1  N  N  N  16.418  22.016   7.262   2.014  -11.791   9.391  O51   PSF  13  
PSF  O52   O52   O  0  1  N  N  N  16.626  23.461   8.803   0.855  -10.253   8.121  O52   PSF  14  
PSF  C6    C6    C  0  1  N  N  N  17.675  21.131   9.443  -0.231  -11.095  10.020  C6    PSF  15  
PSF  C7    C7    C  0  1  N  N  N  17.650  19.504   9.497  -0.120  -11.966  11.272  C7    PSF  16  
PSF  C13   C13   C  0  1  N  N  N  18.694  26.315  12.046   0.697   -5.634   6.709  C13   PSF  17  
PSF  C14   C14   C  0  1  N  N  N  18.759  26.417  10.610   1.910   -5.101   7.471  C14   PSF  18  
PSF  C15   C15   C  0  1  N  N  N  19.903  25.813  10.044   3.065   -4.717   6.540  C15   PSF  19  
PSF  N     N     N  0  1  N  N  N  20.035  28.623   9.257   5.881   -5.519   0.771  N     PSF  20  
PSF  CA    CA    C  0  1  N  N  S  19.489  28.569   7.874   4.999   -5.951   1.828  CA    PSF  21  
PSF  CB    CB    C  0  1  N  N  N  18.367  27.581   7.701   5.709   -6.870   2.811  CB    PSF  22  
PSF  C     C     C  0  1  N  N  N  19.464  29.689   6.875   4.496   -4.707   2.531  C     PSF  23  
PSF  OT1   OT1   O  0  1  N  N  N  18.794  29.504   5.845   5.152   -3.692   2.723  OT1   PSF  24  
PSF  OT2   OT2   O  0  1  N  N  N  20.102  30.717   7.123   3.223   -4.859   2.982  OT2   PSF  25  
PSF  C8    C8    C  0  1  N  N  N       ?       ?       ?  -1.394  -11.935  12.121  C8    PSF  26  
PSF  C9    C9    C  0  1  N  N  N       ?       ?       ?  -1.240  -12.787  13.381  C9    PSF  27  
PSF  C10   C10   C  0  1  N  N  N       ?       ?       ?  -2.485  -12.726  14.251  C10   PSF  28  
PSF  C16   C16   C  0  1  N  N  N       ?       ?       ?   4.274   -4.221   7.333  C16   PSF  29  
PSF  C17   C17   C  0  1  N  N  N       ?       ?       ?   5.439   -3.880   6.418  C17   PSF  30  
PSF  HO3   HO3   H  0  1  N  N  N  16.125  29.090  10.775   5.995  -10.346   4.833  HO3   PSF  31  
PSF  H21   1H2   H  0  1  N  N  N  14.676  27.008  11.016   2.561   -8.243   4.379  H21   PSF  32  
PSF  H22   2H2   H  0  1  N  N  N  14.407  26.071   9.684   3.086   -9.912   4.710  H22   PSF  33  
PSF  H31   1H3   H  0  1  N  N  N  16.060  24.273  10.848   0.726   -9.449   5.603  H31   PSF  34  
PSF  H41   1H4   H  0  1  N  N  N  17.887  24.232  10.339   2.836   -9.810   7.820  H41   PSF  35  
PSF  H42   2H4   H  0  1  N  N  N  16.259  23.265  10.831   2.174  -11.135   6.817  H42   PSF  36  
PSF  H61   1H6   H  0  1  N  N  N  18.715  21.369   9.175  -1.086  -11.422   9.418  H61   PSF  37  
PSF  H62   2H6   H  0  1  N  N  N  17.204  21.353  10.412  -0.396  -10.054  10.320  H62   PSF  38  
PSF  H71   1H7   H  0  1  N  N  N  18.581  19.244   8.972   0.717  -11.596  11.876  H71   PSF  39  
PSF  H72   2H7   H  0  1  N  N  N  17.363  19.422  10.556   0.118  -13.000  10.994  H72   PSF  40  
PSF  H131  1H13  H  0  0  N  N  N  19.545  26.828  12.519  -0.114   -5.852   7.412  H131  PSF  41  
PSF  H132  2H13  H  0  0  N  N  N  18.744  25.272  12.391   0.351   -4.868   6.005  H132  PSF  42  
PSF  H141  1H14  H  0  0  N  N  N  17.871  25.920  10.193   2.256   -5.882   8.160  H141  PSF  43  
PSF  H142  2H14  H  0  0  N  N  N  18.807  27.488  10.366   1.624   -4.238   8.084  H142  PSF  44  
PSF  H151  1H15  H  0  0  N  N  N  20.434  26.374   9.261   2.742   -3.936   5.842  H151  PSF  45  
PSF  H152  2H15  H  0  0  N  N  N  20.807  25.633  10.645   3.354   -5.587   5.937  H152  PSF  46  
PSF  H1    1H    H  0  1  N  N  N  21.034  28.635   9.221   6.868   -5.462   0.953  H1    PSF  47  
PSF  H2    2H    H  0  1  N  N  N  19.708  29.451   9.712   5.485   -5.095  -0.050  H2    PSF  48  
PSF  HA    HA    H  0  1  N  N  N  20.475  28.255   7.502   4.169   -6.458   1.325  HA    PSF  49  
PSF  HB1   1HB   H  0  1  N  N  N  18.415  26.748   8.418   6.567   -6.368   3.270  HB1   PSF  50  
PSF  HB2   2HB   H  0  1  N  N  N  18.358  27.054   6.735   6.064   -7.785   2.323  HB2   PSF  51  
PSF  HXT   HXT   H  0  1  N  N  N  19.999  31.334   6.408   2.860   -4.093   3.476  HXT   PSF  52  
PSF  H81   1H8   H  0  1  N  N  N       ?       ?       ?  -2.246  -12.303  11.536  H81   PSF  53  
PSF  H82   2H8   H  0  1  N  N  N       ?       ?       ?  -1.621  -10.900  12.404  H82   PSF  54  
PSF  H91   1H9   H  0  1  N  N  N       ?       ?       ?  -1.046  -13.830  13.104  H91   PSF  55  
PSF  H92   2H9   H  0  1  N  N  N       ?       ?       ?  -0.378  -12.440  13.962  H92   PSF  56  
PSF  H101  1H10  H  0  0  N  N  N       ?       ?       ?  -2.689  -11.700  14.573  H101  PSF  57  
PSF  H102  2H10  H  0  0  N  N  N       ?       ?       ?  -3.361  -13.097  13.709  H102  PSF  58  
PSF  H103  3H10  H  0  0  N  N  N       ?       ?       ?  -2.353  -13.343  15.146  H103  PSF  59  
PSF  H161  1H16  H  0  0  N  N  N       ?       ?       ?   3.999   -3.331   7.911  H161  PSF  60  
PSF  H162  2H16  H  0  0  N  N  N       ?       ?       ?   4.591   -4.988   8.048  H162  PSF  61  
PSF  H171  1H17  H  0  0  N  N  N       ?       ?       ?   5.760   -4.758   5.848  H171  PSF  62  
PSF  H172  2H17  H  0  0  N  N  N       ?       ?       ?   5.165   -3.092   5.710  H172  PSF  63  
PSF  H173  3H17  H  0  0  N  N  N       ?       ?       ?   6.292   -3.527   7.006  H173  PSF  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PSF  O2   P     SING  N  N   1  
PSF  O2   C2    SING  N  N   2  
PSF  O1   P     SING  N  N   3  
PSF  O1   CB    SING  N  N   4  
PSF  P    O4    DOUB  N  N   5  
PSF  P    O3    SING  N  N   6  
PSF  O3   HO3   SING  N  N   7  
PSF  C2   C3    SING  N  N   8  
PSF  C2   H21   SING  N  N   9  
PSF  C2   H22   SING  N  N  10  
PSF  C3   O11   SING  N  N  11  
PSF  C3   C4    SING  N  N  12  
PSF  C3   H31   SING  N  N  13  
PSF  O11  C1    SING  N  N  14  
PSF  O12  C1    DOUB  N  N  15  
PSF  C1   C13   SING  N  N  16  
PSF  C4   O52   SING  N  N  17  
PSF  C4   H41   SING  N  N  18  
PSF  C4   H42   SING  N  N  19  
PSF  C5   O51   DOUB  N  N  20  
PSF  C5   O52   SING  N  N  21  
PSF  C5   C6    SING  N  N  22  
PSF  C6   C7    SING  N  N  23  
PSF  C6   H61   SING  N  N  24  
PSF  C6   H62   SING  N  N  25  
PSF  C7   C8    SING  N  N  26  
PSF  C7   H71   SING  N  N  27  
PSF  C7   H72   SING  N  N  28  
PSF  C13  C14   SING  N  N  29  
PSF  C13  H131  SING  N  N  30  
PSF  C13  H132  SING  N  N  31  
PSF  C14  C15   SING  N  N  32  
PSF  C14  H141  SING  N  N  33  
PSF  C14  H142  SING  N  N  34  
PSF  C15  C16   SING  N  N  35  
PSF  C15  H151  SING  N  N  36  
PSF  C15  H152  SING  N  N  37  
PSF  N    CA    SING  N  N  38  
PSF  N    H1    SING  N  N  39  
PSF  N    H2    SING  N  N  40  
PSF  CA   CB    SING  N  N  41  
PSF  CA   C     SING  N  N  42  
PSF  CA   HA    SING  N  N  43  
PSF  CB   HB1   SING  N  N  44  
PSF  CB   HB2   SING  N  N  45  
PSF  C    OT1   DOUB  N  N  46  
PSF  C    OT2   SING  N  N  47  
PSF  OT2  HXT   SING  N  N  48  
PSF  C8   C9    SING  N  N  49  
PSF  C8   H81   SING  N  N  50  
PSF  C8   H82   SING  N  N  51  
PSF  C9   C10   SING  N  N  52  
PSF  C9   H91   SING  N  N  53  
PSF  C9   H92   SING  N  N  54  
PSF  C10  H101  SING  N  N  55  
PSF  C10  H102  SING  N  N  56  
PSF  C10  H103  SING  N  N  57  
PSF  C16  C17   SING  N  N  58  
PSF  C16  H161  SING  N  N  59  
PSF  C16  H162  SING  N  N  60  
PSF  C17  H171  SING  N  N  61  
PSF  C17  H172  SING  N  N  62  
PSF  C17  H173  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PSF  SMILES            ACDLabs               10.04  "O=C(OC(COP(=O)(OCC(C(=O)O)N)O)COC(=O)CCCCC)CCCCC"  
PSF  SMILES_CANONICAL  CACTVS                3.341  "CCCCCC(=O)OC[C@H](CO[P@](O)(=O)OC[C@H](N)C(O)=O)OC(=O)CCCCC"  
PSF  SMILES            CACTVS                3.341  "CCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](N)C(O)=O)OC(=O)CCCCC"  
PSF  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCCC(=O)OCC(CO[P@@](=O)(O)OC[C@@H](C(=O)O)N)OC(=O)CCCCC"  
PSF  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCCC(=O)OCC(COP(=O)(O)OCC(C(=O)O)N)OC(=O)CCCCC"  
PSF  InChI             InChI                 1.03   "InChI=1S/C18H34NO10P/c1-3-5-7-9-16(20)26-11-14(29-17(21)10-8-6-4-2)12-27-30(24,25)28-13-15(19)18(22)23/h14-15H,3-13,19H2,1-2H3,(H,22,23)(H,24,25)/t14-,15+/m1/s1"  
PSF  InChIKey          InChI                 1.03   MIQYPPGTNIFAPO-CABCVRRESA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PSF  "SYSTEMATIC NAME"  ACDLabs               10.04  "O-[(S)-{[(2R)-2,3-bis(hexanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine"  
PSF  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-2-amino-3-[2,3-di(hexanoyloxy)propoxy-hydroxy-phosphoryl]oxy-propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PSF  "Create component"   2000-01-12  EBI   
PSF  "Modify descriptor"  2011-06-04  RCSB  
PSF  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     PSF
_pdbx_chem_comp_synonyms.name        PHOSPHATIDYLSERINE
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##