data_PUR # _chem_comp.id PUR _chem_comp.name "PURINE RIBOSIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 253.235 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PUR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1FKW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PUR N1 N1 N 0 1 Y N N 1.417 20.582 39.043 -4.596 -0.376 0.297 N1 PUR 1 PUR C2 C2 C 0 1 Y N N 2.414 20.281 39.873 -3.743 -1.281 0.742 C2 PUR 2 PUR N3 N3 N 0 1 Y N N 3.598 19.837 39.445 -2.439 -1.100 0.705 N3 PUR 3 PUR C4 C4 C 0 1 Y N N 3.815 19.669 38.114 -1.930 0.017 0.205 C4 PUR 4 PUR C5 C5 C 0 1 Y N N 2.843 19.951 37.215 -2.805 1.012 -0.277 C5 PUR 5 PUR C6 C6 C 0 1 Y N N 1.572 20.433 37.671 -4.178 0.770 -0.214 C6 PUR 6 PUR N7 N7 N 1 1 Y N N 3.333 19.699 35.988 -2.036 2.036 -0.720 N7 PUR 7 PUR C8 C8 C 0 1 Y N N 4.584 19.263 36.124 -0.780 1.744 -0.542 C8 PUR 8 PUR N9 N9 N 0 1 Y N N 4.896 19.238 37.414 -0.662 0.512 0.028 N9 PUR 9 PUR "C1'" C1* C 0 1 N N R 6.119 18.740 37.956 0.589 -0.163 0.382 "C1'" PUR 10 PUR "C2'" C2* C 0 1 N N R 6.524 17.522 37.133 1.096 -1.032 -0.797 "C2'" PUR 11 PUR "O2'" O2* O 0 1 N N N 6.725 16.400 37.996 0.500 -2.331 -0.767 "O2'" PUR 12 PUR "C3'" C3* C 0 1 N N S 7.791 17.835 36.281 2.618 -1.116 -0.509 "C3'" PUR 13 PUR "O3'" O3* O 0 1 N N N 8.717 16.743 36.300 2.935 -2.340 0.155 "O3'" PUR 14 PUR "C4'" C4* C 0 1 N N R 8.237 19.017 37.267 2.890 0.091 0.410 "C4'" PUR 15 PUR "O4'" O4* O 0 1 N N N 7.141 19.688 37.768 1.649 0.798 0.572 "O4'" PUR 16 PUR "C5'" C5* C 0 1 N N N 9.207 20.029 36.595 3.932 1.009 -0.232 "C5'" PUR 17 PUR "O5'" O5* O 0 1 N N N 8.690 20.575 35.359 4.259 2.065 0.674 "O5'" PUR 18 PUR H2 H2 H 0 1 N N N 2.252 20.404 40.957 -4.129 -2.202 1.152 H2 PUR 19 PUR H6 H6 H 0 1 N N N 0.741 20.680 36.989 -4.884 1.503 -0.575 H6 PUR 20 PUR HN7 HN7 H 0 1 N N N 2.839 19.818 35.103 -2.369 2.859 -1.110 HN7 PUR 21 PUR H8 H8 H 0 1 N N N 5.255 18.969 35.299 0.048 2.385 -0.806 H8 PUR 22 PUR "H1'" H1* H 0 1 N N N 5.979 18.509 39.038 0.456 -0.771 1.277 "H1'" PUR 23 PUR "H2'" H2* H 0 1 N N N 5.704 17.266 36.421 0.906 -0.542 -1.752 "H2'" PUR 24 PUR "HO2'" *HO2 H 0 0 N N N 6.977 15.641 37.483 0.855 -2.819 -1.522 "HO2'" PUR 25 PUR "H3'" H3* H 0 1 N N N 7.687 18.044 35.190 3.187 -1.026 -1.434 "H3'" PUR 26 PUR "HO3'" *HO3 H 0 0 N N N 9.489 16.933 35.780 3.890 -2.337 0.308 "HO3'" PUR 27 PUR "H4'" H4* H 0 1 N N N 8.786 18.527 38.104 3.249 -0.255 1.380 "H4'" PUR 28 PUR "H5'1" 1H5* H 0 0 N N N 9.485 20.843 37.303 3.527 1.432 -1.151 "H5'1" PUR 29 PUR "H5'2" 2H5* H 0 0 N N N 10.211 19.572 36.438 4.831 0.436 -0.460 "H5'2" PUR 30 PUR "HO5'" *HO5 H 0 0 N N N 9.282 21.193 34.948 4.917 2.619 0.232 "HO5'" PUR 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PUR N1 C2 SING Y N 1 PUR N1 C6 DOUB Y N 2 PUR C2 N3 DOUB Y N 3 PUR C2 H2 SING N N 4 PUR N3 C4 SING Y N 5 PUR C4 C5 DOUB Y N 6 PUR C4 N9 SING Y N 7 PUR C5 C6 SING Y N 8 PUR C5 N7 SING Y N 9 PUR C6 H6 SING N N 10 PUR N7 C8 DOUB Y N 11 PUR N7 HN7 SING N N 12 PUR C8 N9 SING Y N 13 PUR C8 H8 SING N N 14 PUR N9 "C1'" SING N N 15 PUR "C1'" "C2'" SING N N 16 PUR "C1'" "O4'" SING N N 17 PUR "C1'" "H1'" SING N N 18 PUR "C2'" "O2'" SING N N 19 PUR "C2'" "C3'" SING N N 20 PUR "C2'" "H2'" SING N N 21 PUR "O2'" "HO2'" SING N N 22 PUR "C3'" "O3'" SING N N 23 PUR "C3'" "C4'" SING N N 24 PUR "C3'" "H3'" SING N N 25 PUR "O3'" "HO3'" SING N N 26 PUR "C4'" "O4'" SING N N 27 PUR "C4'" "C5'" SING N N 28 PUR "C4'" "H4'" SING N N 29 PUR "C5'" "O5'" SING N N 30 PUR "C5'" "H5'1" SING N N 31 PUR "C5'" "H5'2" SING N N 32 PUR "O5'" "HO5'" SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PUR SMILES ACDLabs 10.04 "OCC3OC(n2c[nH+]c1cncnc12)C(O)C3O" PUR SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2c[nH+]c3cncnc23" PUR SMILES CACTVS 3.341 "OC[CH]1O[CH]([CH](O)[CH]1O)n2c[nH+]c3cncnc23" PUR SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)n(c[nH+]2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O" PUR SMILES "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)n(c[nH+]2)C3C(C(C(O3)CO)O)O" PUR InChI InChI 1.03 "InChI=1S/C10H12N4O4/c15-2-6-7(16)8(17)10(18-6)14-4-13-5-1-11-3-12-9(5)14/h1,3-4,6-8,10,15-17H,2H2/p+1/t6-,7-,8-,10-/m1/s1" PUR InChIKey InChI 1.03 MRWXACSTFXYYMV-FDDDBJFASA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PUR "SYSTEMATIC NAME" ACDLabs 10.04 9-beta-D-ribofuranosyl-9H-purin-7-ium PUR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4R,5R)-2-(hydroxymethyl)-5-purin-7-ium-9-yl-oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PUR "Create component" 1999-07-08 EBI PUR "Modify descriptor" 2011-06-04 RCSB #