data_PXQ # _chem_comp.id PXQ _chem_comp.name "3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(~{Z})-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H42 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-01 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 590.710 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PXQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PXQ CHA C1 C 0 1 N N N N N N ? ? ? -0.129 -0.714 -1.381 CHA PXQ 1 PXQ NA N1 N 0 1 Y N N N N N ? ? ? 2.164 -0.687 -0.271 NA PXQ 2 PXQ C1A C2 C 0 1 Y N N N N N ? ? ? 0.959 -1.269 -0.498 C1A PXQ 3 PXQ C2A C3 C 0 1 Y N N N N N ? ? ? 0.892 -2.431 0.199 C2A PXQ 4 PXQ C3A C4 C 0 1 Y N N N N N ? ? ? 2.095 -2.589 0.890 C3A PXQ 5 PXQ C4A C5 C 0 1 Y N N N N N ? ? ? 2.887 -1.492 0.583 C4A PXQ 6 PXQ CMA C6 C 0 1 N N N N N N ? ? ? 2.467 -3.738 1.791 CMA PXQ 7 PXQ CAA C7 C 0 1 N N N N N N ? ? ? -0.275 -3.384 0.223 CAA PXQ 8 PXQ CBA C8 C 0 1 N N N N N N ? ? ? -0.116 -4.414 -0.896 CBA PXQ 9 PXQ CGA C9 C 0 1 N N N N N N ? ? ? -1.283 -5.367 -0.872 CGA PXQ 10 PXQ O1A O1 O 0 1 N N N N N N ? ? ? -2.153 -5.235 -0.043 O1A PXQ 11 PXQ O2A O2 O 0 1 N N N N N N ? ? ? -1.356 -6.362 -1.769 O2A PXQ 12 PXQ CHB C10 C 0 1 N N N N N N ? ? ? 4.189 -1.242 1.064 CHB PXQ 13 PXQ NB N2 N 0 1 N N N N N N ? ? ? 4.710 0.341 -0.764 NB PXQ 14 PXQ C1B C11 C 0 1 N N N N N N ? ? ? 4.991 -0.311 0.434 C1B PXQ 15 PXQ C2B C12 C 0 1 N N N N N N ? ? ? 6.241 0.154 0.887 C2B PXQ 16 PXQ C3B C13 C 0 1 N N N N N N ? ? ? 6.693 1.061 -0.023 C3B PXQ 17 PXQ C4B C14 C 0 1 N N N N N N ? ? ? 5.735 1.166 -1.047 C4B PXQ 18 PXQ CMB C15 C 0 1 N N N N N N ? ? ? 6.949 -0.275 2.146 CMB PXQ 19 PXQ CAB C16 C 0 1 N N N N N N ? ? ? 7.994 1.818 0.053 CAB PXQ 20 PXQ CBB C17 C 0 1 N N N N N N ? ? ? 9.062 1.078 -0.756 CBB PXQ 21 PXQ OB O3 O 0 1 N N N N N N ? ? ? 5.817 1.890 -2.026 OB PXQ 22 PXQ NC N3 N 0 1 N N N N N N ? ? ? -5.161 1.444 -0.651 NC PXQ 23 PXQ C1C C18 C 0 1 N N N N N N ? ? ? -6.291 1.804 -1.274 C1C PXQ 24 PXQ C2C C19 C 0 1 N N R N N N ? ? ? -7.463 1.513 -0.359 C2C PXQ 25 PXQ C3C C20 C 0 1 N N R N N N ? ? ? -6.779 0.923 0.893 C3C PXQ 26 PXQ C4C C21 C 0 1 N N N N N N ? ? ? -5.310 0.954 0.530 C4C PXQ 27 PXQ CMC C22 C 0 1 N N N N N N ? ? ? -8.213 2.801 -0.012 CMC PXQ 28 PXQ CAC C23 C 0 1 N N N N N N ? ? ? -7.248 -0.512 1.139 CAC PXQ 29 PXQ CBC C24 C 0 1 N N N N N N ? ? ? -8.748 -0.513 1.442 CBC PXQ 30 PXQ OC O4 O 0 1 N N N N N N ? ? ? -6.364 2.284 -2.386 OC PXQ 31 PXQ CHD C25 C 0 1 N N N N N N ? ? ? -4.189 0.482 1.419 CHD PXQ 32 PXQ ND N4 N 0 1 Y N N N N N ? ? ? -2.270 -0.410 -0.017 ND PXQ 33 PXQ C1D C26 C 0 1 Y N N N N N ? ? ? -2.881 0.591 0.679 C1D PXQ 34 PXQ C2D C27 C 0 1 Y N N N N N ? ? ? -2.112 1.695 0.591 C2D PXQ 35 PXQ C3D C28 C 0 1 Y N N N N N ? ? ? -0.986 1.364 -0.189 C3D PXQ 36 PXQ C4D C29 C 0 1 Y N N N N N ? ? ? -1.107 0.068 -0.542 C4D PXQ 37 PXQ CMD C30 C 0 1 N N N N N N ? ? ? -2.403 3.037 1.211 CMD PXQ 38 PXQ CAD C31 C 0 1 N N N N N N ? ? ? 0.148 2.286 -0.555 CAD PXQ 39 PXQ CBD C32 C 0 1 N N N N N N ? ? ? 1.241 2.200 0.513 CBD PXQ 40 PXQ CGD C33 C 0 1 N N N N N N ? ? ? 2.375 3.122 0.147 CGD PXQ 41 PXQ O1D O5 O 0 1 N N N N N N ? ? ? 3.451 3.213 0.945 O1D PXQ 42 PXQ O2D O6 O 0 1 N N N N N N ? ? ? 2.316 3.781 -0.864 O2D PXQ 43 PXQ H1 H1 H 0 1 N N N N N N ? ? ? 0.312 -0.058 -2.131 H1 PXQ 44 PXQ H2 H2 H 0 1 N N N N N N ? ? ? -0.649 -1.534 -1.875 H2 PXQ 45 PXQ H3 H3 H 0 1 N N N N N N ? ? ? 2.467 0.153 -0.649 H3 PXQ 46 PXQ H4 H4 H 0 1 N N N N N N ? ? ? 2.168 -3.509 2.814 H4 PXQ 47 PXQ H5 H5 H 0 1 N N N N N N ? ? ? 1.957 -4.641 1.457 H5 PXQ 48 PXQ H6 H6 H 0 1 N N N N N N ? ? ? 3.545 -3.895 1.754 H6 PXQ 49 PXQ H7 H7 H 0 1 N N N N N N ? ? ? -0.307 -3.895 1.186 H7 PXQ 50 PXQ H8 H8 H 0 1 N N N N N N ? ? ? -1.201 -2.828 0.076 H8 PXQ 51 PXQ H9 H9 H 0 1 N N N N N N ? ? ? -0.084 -3.904 -1.858 H9 PXQ 52 PXQ H10 H10 H 0 1 N N N N N N ? ? ? 0.810 -4.970 -0.749 H10 PXQ 53 PXQ H11 H11 H 0 1 N N N N N N ? ? ? -2.124 -6.948 -1.714 H11 PXQ 54 PXQ H12 H12 H 0 1 N N N N N N ? ? ? 4.559 -1.779 1.925 H12 PXQ 55 PXQ H13 H13 H 0 1 N N N N N N ? ? ? 3.913 0.218 -1.304 H13 PXQ 56 PXQ H14 H14 H 0 1 N N N N N N ? ? ? 6.343 -1.014 2.670 H14 PXQ 57 PXQ H15 H15 H 0 1 N N N N N N ? ? ? 7.914 -0.713 1.890 H15 PXQ 58 PXQ H16 H16 H 0 1 N N N N N N ? ? ? 7.103 0.591 2.789 H16 PXQ 59 PXQ H17 H17 H 0 1 N N N N N N ? ? ? 7.857 2.819 -0.356 H17 PXQ 60 PXQ H18 H18 H 0 1 N N N N N N ? ? ? 8.312 1.890 1.093 H18 PXQ 61 PXQ H19 H19 H 0 1 N N N N N N ? ? ? 8.744 1.005 -1.796 H19 PXQ 62 PXQ H20 H20 H 0 1 N N N N N N ? ? ? 10.003 1.625 -0.701 H20 PXQ 63 PXQ H21 H21 H 0 1 N N N N N N ? ? ? 9.199 0.077 -0.347 H21 PXQ 64 PXQ H22 H22 H 0 1 N N N N N N ? ? ? -8.137 0.787 -0.813 H22 PXQ 65 PXQ H23 H23 H 0 1 N N N N N N ? ? ? -6.973 1.546 1.766 H23 PXQ 66 PXQ H24 H24 H 0 1 N N N N N N ? ? ? -8.608 3.249 -0.924 H24 PXQ 67 PXQ H25 H25 H 0 1 N N N N N N ? ? ? -9.035 2.572 0.666 H25 PXQ 68 PXQ H26 H26 H 0 1 N N N N N N ? ? ? -7.529 3.501 0.469 H26 PXQ 69 PXQ H27 H27 H 0 1 N N N N N N ? ? ? -7.056 -1.114 0.251 H27 PXQ 70 PXQ H28 H28 H 0 1 N N N N N N ? ? ? -6.705 -0.931 1.987 H28 PXQ 71 PXQ H29 H29 H 0 1 N N N N N N ? ? ? -9.062 -1.520 1.717 H29 PXQ 72 PXQ H30 H30 H 0 1 N N N N N N ? ? ? -8.952 0.169 2.267 H30 PXQ 73 PXQ H31 H31 H 0 1 N N N N N N ? ? ? -9.297 -0.190 0.558 H31 PXQ 74 PXQ H32 H32 H 0 1 N N N N N N ? ? ? -4.151 1.101 2.316 H32 PXQ 75 PXQ H33 H33 H 0 1 N N N N N N ? ? ? -4.361 -0.557 1.701 H33 PXQ 76 PXQ H34 H34 H 0 1 N N N N N N ? ? ? -2.607 -1.314 -0.119 H34 PXQ 77 PXQ H35 H35 H 0 1 N N N N N N ? ? ? -1.969 3.078 2.210 H35 PXQ 78 PXQ H36 H36 H 0 1 N N N N N N ? ? ? -1.970 3.825 0.595 H36 PXQ 79 PXQ H37 H37 H 0 1 N N N N N N ? ? ? -3.482 3.180 1.278 H37 PXQ 80 PXQ H38 H38 H 0 1 N N N N N N ? ? ? 0.560 1.990 -1.520 H38 PXQ 81 PXQ H39 H39 H 0 1 N N N N N N ? ? ? -0.221 3.310 -0.615 H39 PXQ 82 PXQ H40 H40 H 0 1 N N N N N N ? ? ? 0.829 2.496 1.478 H40 PXQ 83 PXQ H41 H41 H 0 1 N N N N N N ? ? ? 1.610 1.176 0.574 H41 PXQ 84 PXQ H42 H42 H 0 1 N N N N N N ? ? ? 4.153 3.818 0.668 H42 PXQ 85 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PXQ OB C4B DOUB N N 1 PXQ CBB CAB SING N N 2 PXQ CAB C3B SING N N 3 PXQ C4B C3B SING N N 4 PXQ C4B NB SING N N 5 PXQ C3B C2B DOUB N N 6 PXQ NB C1B SING N N 7 PXQ C2B C1B SING N N 8 PXQ C2B CMB SING N N 9 PXQ C1B CHB DOUB N Z 10 PXQ CMA C3A SING N N 11 PXQ O1A CGA DOUB N N 12 PXQ CHB C4A SING N N 13 PXQ O2A CGA SING N N 14 PXQ C3A C4A DOUB Y N 15 PXQ C3A C2A SING Y N 16 PXQ CGA CBA SING N N 17 PXQ C4A NA SING Y N 18 PXQ C2A CAA SING N N 19 PXQ C2A C1A DOUB Y N 20 PXQ CAA CBA SING N N 21 PXQ NA C1A SING Y N 22 PXQ C1A CHA SING N N 23 PXQ CHA C4D SING N N 24 PXQ C4D ND SING Y N 25 PXQ C4D C3D DOUB Y N 26 PXQ ND C1D SING Y N 27 PXQ C1D CHD SING N N 28 PXQ C1D C2D DOUB Y N 29 PXQ C3D CAD SING N N 30 PXQ C3D C2D SING Y N 31 PXQ CHD C4C SING N N 32 PXQ CAD CBD SING N N 33 PXQ O2D CGD DOUB N N 34 PXQ C2D CMD SING N N 35 PXQ CBC CAC SING N N 36 PXQ CBD CGD SING N N 37 PXQ CAC C3C SING N N 38 PXQ CGD O1D SING N N 39 PXQ C4C C3C SING N N 40 PXQ C4C NC DOUB N N 41 PXQ C3C C2C SING N N 42 PXQ NC C1C SING N N 43 PXQ C2C CMC SING N N 44 PXQ C2C C1C SING N N 45 PXQ C1C OC DOUB N N 46 PXQ CHA H1 SING N N 47 PXQ CHA H2 SING N N 48 PXQ NA H3 SING N N 49 PXQ CMA H4 SING N N 50 PXQ CMA H5 SING N N 51 PXQ CMA H6 SING N N 52 PXQ CAA H7 SING N N 53 PXQ CAA H8 SING N N 54 PXQ CBA H9 SING N N 55 PXQ CBA H10 SING N N 56 PXQ O2A H11 SING N N 57 PXQ CHB H12 SING N N 58 PXQ NB H13 SING N N 59 PXQ CMB H14 SING N N 60 PXQ CMB H15 SING N N 61 PXQ CMB H16 SING N N 62 PXQ CAB H17 SING N N 63 PXQ CAB H18 SING N N 64 PXQ CBB H19 SING N N 65 PXQ CBB H20 SING N N 66 PXQ CBB H21 SING N N 67 PXQ C2C H22 SING N N 68 PXQ C3C H23 SING N N 69 PXQ CMC H24 SING N N 70 PXQ CMC H25 SING N N 71 PXQ CMC H26 SING N N 72 PXQ CAC H27 SING N N 73 PXQ CAC H28 SING N N 74 PXQ CBC H29 SING N N 75 PXQ CBC H30 SING N N 76 PXQ CBC H31 SING N N 77 PXQ CHD H32 SING N N 78 PXQ CHD H33 SING N N 79 PXQ ND H34 SING N N 80 PXQ CMD H35 SING N N 81 PXQ CMD H36 SING N N 82 PXQ CMD H37 SING N N 83 PXQ CAD H38 SING N N 84 PXQ CAD H39 SING N N 85 PXQ CBD H40 SING N N 86 PXQ CBD H41 SING N N 87 PXQ O1D H42 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PXQ InChI InChI 1.03 "InChI=1S/C33H42N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h13,19-20,34-35H,7-12,14-15H2,1-6H3,(H,36,43)(H,38,39)(H,40,41)/b26-13-/t19-,20-/m1/s1" PXQ InChIKey InChI 1.03 RIXXCMVADHNPLY-UKJJQICTSA-N PXQ SMILES_CANONICAL CACTVS 3.385 "CC[C@@H]1[C@@H](C)C(=O)N=C1Cc2[nH]c(Cc3[nH]c(\C=C4/NC(=O)C(=C4C)CC)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C" PXQ SMILES CACTVS 3.385 "CC[CH]1[CH](C)C(=O)N=C1Cc2[nH]c(Cc3[nH]c(C=C4NC(=O)C(=C4C)CC)c(C)c3CCC(O)=O)c(CCC(O)=O)c2C" PXQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H]1[C@H](C(=O)N=C1Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)/C=C\4/C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C" PXQ SMILES "OpenEye OEToolkits" 2.0.7 "CCC1C(C(=O)N=C1Cc2c(c(c([nH]2)Cc3c(c(c([nH]3)C=C4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C" # _pdbx_chem_comp_identifier.comp_id PXQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(~{Z})-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PXQ "Create component" 2020-05-01 PDBE PXQ "Initial release" 2021-01-20 RCSB PXQ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id PXQ _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom CAC _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #