data_PY9 # _chem_comp.id PY9 _chem_comp.name "4-{[(2R)-2-(2-methylphenyl)pyrrolidin-1-yl]carbonyl}benzene-1,3-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-09-26 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 297.348 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PY9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3EKR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PY9 N1 N1 N 0 1 N N N 17.114 -3.712 51.065 0.332 -0.879 -0.259 N1 PY9 1 PY9 C4 C4 C 0 1 Y N N 15.217 0.897 49.693 -4.563 0.148 0.493 C4 PY9 2 PY9 C5 C5 C 0 1 Y N N 16.582 0.677 49.370 -4.131 0.846 -0.625 C5 PY9 3 PY9 C6 C6 C 0 1 Y N N 17.103 -0.646 49.404 -2.785 0.873 -0.948 C6 PY9 4 PY9 C7 C7 C 0 1 N N N 16.829 -3.119 49.805 -0.428 0.213 -0.477 C7 PY9 5 PY9 C8 C8 C 0 1 N N R 16.938 -3.163 52.449 1.751 -1.020 -0.617 C8 PY9 6 PY9 C10 C10 C 0 1 N N N 17.868 -5.404 52.588 0.849 -3.216 -0.142 C10 PY9 7 PY9 C13 C13 C 0 1 Y N N 14.490 -4.078 52.568 2.110 0.535 1.311 C13 PY9 8 PY9 C15 C15 C 0 1 Y N N 12.788 -3.089 54.034 4.073 1.897 1.469 C15 PY9 9 PY9 C17 C17 C 0 1 Y N N 15.082 -2.140 54.006 3.783 0.427 -0.398 C17 PY9 10 PY9 C14 C14 C 0 1 Y N N 13.162 -4.053 53.073 2.861 1.479 1.986 C14 PY9 11 PY9 C2 C2 C 0 1 Y N N 14.893 -1.500 50.074 -2.309 -0.510 0.984 C2 PY9 12 PY9 C16 C16 C 0 1 Y N N 13.735 -2.143 54.496 4.534 1.370 0.277 C16 PY9 13 PY9 C3 C3 C 0 1 Y N N 14.369 -0.182 50.043 -3.648 -0.528 1.294 C3 PY9 14 PY9 C1 C1 C 0 1 Y N N 16.267 -1.739 49.758 -1.862 0.191 -0.141 C1 PY9 15 PY9 C12 C12 C 0 1 Y N N 15.487 -3.132 53.013 2.570 0.009 0.119 C12 PY9 16 PY9 C9 C9 C 0 1 N N N 17.884 -4.044 53.282 2.191 -2.438 -0.197 C9 PY9 17 PY9 C11 C11 C 0 1 N N N 17.681 -5.066 51.114 -0.120 -2.126 0.382 C11 PY9 18 PY9 C18 C18 C 0 1 N N N 16.025 -1.088 54.557 4.285 -0.147 -1.699 C18 PY9 19 PY9 O3 O3 O 0 1 N N N 17.028 -3.666 48.717 0.071 1.216 -0.950 O3 PY9 20 PY9 O2 O2 O 0 1 N N N 14.689 2.150 49.681 -5.883 0.130 0.809 O2 PY9 21 PY9 O1 O1 O 0 1 N N N 18.418 -0.803 49.088 -2.360 1.555 -2.041 O1 PY9 22 PY9 H5 H5 H 0 1 N N N 17.219 1.507 49.101 -4.845 1.370 -1.244 H5 PY9 23 PY9 H8 H8 H 0 1 N N N 17.171 -2.088 52.471 1.877 -0.893 -1.692 H8 PY9 24 PY9 H10 H10 H 0 1 N N N 17.047 -6.033 52.961 0.553 -3.556 -1.134 H10 PY9 25 PY9 H10A H10A H 0 0 N N N 18.786 -5.981 52.774 0.910 -4.052 0.554 H10A PY9 26 PY9 H13 H13 H 0 1 N N N 14.761 -4.822 51.834 1.165 0.205 1.718 H13 PY9 27 PY9 H15 H15 H 0 1 N N N 11.778 -3.073 54.417 4.660 2.634 1.997 H15 PY9 28 PY9 H14 H14 H 0 1 N N N 12.438 -4.773 52.721 2.501 1.890 2.918 H14 PY9 29 PY9 H2 H2 H 0 1 N N N 14.251 -2.327 50.338 -1.602 -1.036 1.609 H2 PY9 30 PY9 H16 H16 H 0 1 N N N 13.437 -1.410 55.231 5.480 1.697 -0.128 H16 PY9 31 PY9 H3 H3 H 0 1 N N N 13.332 -0.003 50.284 -3.992 -1.070 2.164 H3 PY9 32 PY9 H9 H9 H 0 1 N N N 18.900 -3.623 53.302 2.857 -2.872 -0.943 H9 PY9 33 PY9 H9A H9A H 0 1 N N N 17.564 -4.114 54.332 2.667 -2.421 0.783 H9A PY9 34 PY9 H11 H11 H 0 1 N N N 16.999 -5.786 50.638 -0.047 -2.044 1.467 H11 PY9 35 PY9 H11A H11A H 0 0 N N N 18.637 -5.115 50.572 -1.144 -2.355 0.087 H11A PY9 36 PY9 H18 H18 H 0 1 N N N 16.253 -1.314 55.609 4.884 -1.035 -1.497 H18 PY9 37 PY9 H18A H18A H 0 0 N N N 16.956 -1.088 53.972 3.437 -0.416 -2.328 H18A PY9 38 PY9 H18B H18B H 0 0 N N N 15.549 -0.098 54.490 4.896 0.596 -2.211 H18B PY9 39 PY9 HO2 HO2 H 0 1 N N N 14.566 2.451 50.574 -6.158 0.851 1.391 HO2 PY9 40 PY9 HO1 HO1 H 0 1 N N N 18.515 -0.840 48.144 -2.133 2.478 -1.865 HO1 PY9 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PY9 C7 N1 SING N N 1 PY9 N1 C11 SING N N 2 PY9 N1 C8 SING N N 3 PY9 C5 C4 DOUB Y N 4 PY9 O2 C4 SING N N 5 PY9 C4 C3 SING Y N 6 PY9 C5 C6 SING Y N 7 PY9 C5 H5 SING N N 8 PY9 O1 C6 SING N N 9 PY9 C6 C1 DOUB Y N 10 PY9 O3 C7 DOUB N N 11 PY9 C1 C7 SING N N 12 PY9 C8 C12 SING N N 13 PY9 C8 C9 SING N N 14 PY9 C8 H8 SING N N 15 PY9 C11 C10 SING N N 16 PY9 C10 C9 SING N N 17 PY9 C10 H10 SING N N 18 PY9 C10 H10A SING N N 19 PY9 C13 C12 DOUB Y N 20 PY9 C13 C14 SING Y N 21 PY9 C13 H13 SING N N 22 PY9 C14 C15 DOUB Y N 23 PY9 C15 C16 SING Y N 24 PY9 C15 H15 SING N N 25 PY9 C12 C17 SING Y N 26 PY9 C17 C16 DOUB Y N 27 PY9 C17 C18 SING N N 28 PY9 C14 H14 SING N N 29 PY9 C1 C2 SING Y N 30 PY9 C3 C2 DOUB Y N 31 PY9 C2 H2 SING N N 32 PY9 C16 H16 SING N N 33 PY9 C3 H3 SING N N 34 PY9 C9 H9 SING N N 35 PY9 C9 H9A SING N N 36 PY9 C11 H11 SING N N 37 PY9 C11 H11A SING N N 38 PY9 C18 H18 SING N N 39 PY9 C18 H18A SING N N 40 PY9 C18 H18B SING N N 41 PY9 O2 HO2 SING N N 42 PY9 O1 HO1 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PY9 SMILES ACDLabs 10.04 "O=C(c1ccc(O)cc1O)N3CCCC3c2c(cccc2)C" PY9 SMILES_CANONICAL CACTVS 3.341 "Cc1ccccc1[C@H]2CCCN2C(=O)c3ccc(O)cc3O" PY9 SMILES CACTVS 3.341 "Cc1ccccc1[CH]2CCCN2C(=O)c3ccc(O)cc3O" PY9 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1ccccc1[C@H]2CCCN2C(=O)c3ccc(cc3O)O" PY9 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1ccccc1C2CCCN2C(=O)c3ccc(cc3O)O" PY9 InChI InChI 1.03 "InChI=1S/C18H19NO3/c1-12-5-2-3-6-14(12)16-7-4-10-19(16)18(22)15-9-8-13(20)11-17(15)21/h2-3,5-6,8-9,11,16,20-21H,4,7,10H2,1H3/t16-/m1/s1" PY9 InChIKey InChI 1.03 TWODFUZHWYZBHZ-MRXNPFEDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PY9 "SYSTEMATIC NAME" ACDLabs 10.04 "4-{[(2R)-2-(2-methylphenyl)pyrrolidin-1-yl]carbonyl}benzene-1,3-diol" PY9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2,4-dihydroxyphenyl)-[(2R)-2-(2-methylphenyl)pyrrolidin-1-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PY9 "Create component" 2008-09-26 RCSB PY9 "Modify aromatic_flag" 2011-06-04 RCSB PY9 "Modify descriptor" 2011-06-04 RCSB #