data_PZN
#
_chem_comp.id PZN
_chem_comp.name "3-(2-{5-TERT-BUTYL-3-[(4-METHYL-FURAZAN-3-YLMETHYL)-AMINO]-2-OXO-2H-PYRAZIN-1-YL}-BUTYRYLAMINO)-5-(HEXYL-METHYL-AMINO)-4-OXO-PENTANOIC ACID ANION"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H44 N7 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge -1
_chem_comp.pdbx_initial_date 2003-11-19
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 574.692
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PZN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1RHJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PZN C1 C1 C 0 1 N N N N N N -85.957 27.124 47.513 12.258 -3.447 1.145 C1 PZN 1
PZN C2 C2 C 0 1 N N N N N N -87.092 27.532 48.460 11.050 -3.317 0.215 C2 PZN 2
PZN C3 C3 C 0 1 N N N N N N -87.782 28.847 48.052 10.103 -2.245 0.756 C3 PZN 3
PZN C4 C4 C 0 1 N N N N N N -89.145 29.023 48.745 8.895 -2.116 -0.174 C4 PZN 4
PZN C5 C5 C 0 1 N N N N N N -90.320 28.785 47.778 7.947 -1.043 0.367 C5 PZN 5
PZN C6 C6 C 0 1 N N N N N N -91.354 27.770 48.337 6.739 -0.914 -0.563 C6 PZN 6
PZN N1 N1 N 0 1 N N N N N N -92.768 27.768 47.850 5.829 0.116 -0.044 N1 PZN 7
PZN C7 C7 C 0 1 N N N N N N -92.838 27.576 46.375 6.436 1.415 -0.363 C7 PZN 8
PZN C8 C8 C 0 1 N N N N N N -93.516 28.998 48.249 4.593 0.023 -0.831 C8 PZN 9
PZN C9 C9 C 0 1 N N N N N N -94.956 28.869 48.847 3.527 0.880 -0.197 C9 PZN 10
PZN O1 O1 O 0 1 N N N N N N -94.793 29.946 49.412 3.773 1.504 0.808 O1 PZN 11
PZN C10 C10 C 0 1 N N S N N N -96.050 28.597 47.821 2.156 0.958 -0.816 C10 PZN 12
PZN N2 N2 N 0 1 N N N N N N -96.058 27.155 47.637 1.218 1.541 0.147 N2 PZN 13
PZN C11 C11 C 0 1 N N N N N N -97.453 29.031 48.312 2.211 1.834 -2.069 C11 PZN 14
PZN C12 C12 C 0 1 N N N N N N -98.293 29.851 47.321 2.588 3.240 -1.682 C12 PZN 15
PZN O2 O2 O -1 1 N N N N N N -99.446 30.206 47.705 2.649 4.112 -2.534 O2 PZN 16
PZN O3 O3 O 0 1 N N N N N N -97.810 30.134 46.181 2.833 3.508 -0.518 O3 PZN 17
PZN C13 C13 C 0 1 N N N N N N -96.304 26.522 46.474 -0.099 1.268 0.056 C13 PZN 18
PZN C14 C14 C 0 1 N N S N N N -96.813 25.066 46.611 -1.049 1.781 1.107 C14 PZN 19
PZN O4 O4 O 0 1 N N N N N N -96.119 27.032 45.368 -0.519 0.611 -0.873 O4 PZN 20
PZN C15 C15 C 0 1 N N N N N N -95.701 24.248 47.326 -0.650 1.220 2.473 C15 PZN 21
PZN C16 C16 C 0 1 N N N N N N -96.216 23.022 48.087 -1.536 1.837 3.557 C16 PZN 22
PZN N3 N3 N 0 1 Y N N N N N -97.263 24.325 45.368 -2.412 1.353 0.783 N3 PZN 23
PZN C18 C18 C 0 1 Y N N N N N -98.954 23.526 43.752 -4.093 -0.340 0.363 C18 PZN 24
PZN N4 N4 N 0 1 Y N N N N N -97.936 22.857 43.035 -4.988 0.605 0.171 N4 PZN 25
PZN C19 C19 C 0 1 Y N N N N N -96.572 22.878 43.426 -4.653 1.891 0.271 C19 PZN 26
PZN C24 C24 C 0 1 Y N N N N N -96.225 23.589 44.549 -3.394 2.276 0.570 C24 PZN 27
PZN C17 C17 C 0 1 Y N N N N N -98.603 24.322 45.020 -2.713 0.039 0.685 C17 PZN 28
PZN O5 O5 O 0 1 N N N N N N -99.501 24.881 45.638 -1.859 -0.812 0.869 O5 PZN 29
PZN C20 C20 C 0 1 N N N N N N -95.624 22.034 42.572 -5.707 2.944 0.044 C20 PZN 30
PZN C23 C23 C 0 1 N N N N N N -94.139 22.254 42.957 -5.086 4.332 0.212 C23 PZN 31
PZN C21 C21 C 0 1 N N N N N N -95.802 22.386 41.079 -6.270 2.805 -1.372 C21 PZN 32
PZN C22 C22 C 0 1 N N N N N N -95.970 20.548 42.779 -6.835 2.764 1.062 C22 PZN 33
PZN N5 N5 N 0 1 N N N N N N -100.205 23.400 43.245 -4.450 -1.678 0.258 N5 PZN 34
PZN C25 C25 C 0 1 N N N N N N -100.653 22.374 42.284 -5.830 -2.045 -0.070 C25 PZN 35
PZN C26 C26 C 0 1 Y N N N N N -100.920 21.061 43.027 -5.951 -3.546 -0.124 C26 PZN 36
PZN C27 C27 C 0 1 Y N N N N N -101.938 20.702 44.053 -5.761 -4.338 -1.274 C27 PZN 37
PZN N7 N7 N 0 1 Y N N N N N -101.739 19.416 44.382 -5.937 -5.589 -0.970 N7 PZN 38
PZN O6 O6 O 0 1 Y N N N N N -100.649 18.925 43.625 -6.262 -5.650 0.409 O6 PZN 39
PZN N6 N6 N 0 1 Y N N N N N -100.172 19.974 42.802 -6.252 -4.312 0.882 N6 PZN 40
PZN C28 C28 C 0 1 N N N N N N -103.043 21.556 44.679 -5.401 -3.815 -2.641 C28 PZN 41
PZN H11 1H1 H 0 1 N N N N N N -85.457 26.171 47.808 12.782 -2.492 1.195 H11 PZN 42
PZN H12 2H1 H 0 1 N N N N N N -86.319 27.071 46.459 11.921 -3.729 2.142 H12 PZN 43
PZN H13 3H1 H 0 1 N N N N N N -85.211 27.947 47.410 12.933 -4.211 0.759 H13 PZN 44
PZN H21 1H2 H 0 1 N N N N N N -87.837 26.709 48.563 11.388 -3.035 -0.782 H21 PZN 45
PZN H22 2H2 H 0 1 N N N N N N -86.729 27.584 49.513 10.527 -4.272 0.164 H22 PZN 46
PZN H31 1H3 H 0 1 N N N N N N -87.119 29.724 48.234 9.765 -2.527 1.753 H31 PZN 47
PZN H32 2H3 H 0 1 N N N N N N -87.878 28.926 46.944 10.626 -1.290 0.806 H32 PZN 48
PZN H41 1H4 H 0 1 N N N N N N -89.226 28.373 49.647 9.232 -1.833 -1.171 H41 PZN 49
PZN H42 2H4 H 0 1 N N N N N N -89.222 30.020 49.237 8.371 -3.070 -0.225 H42 PZN 50
PZN H51 1H5 H 0 1 N N N N N N -90.811 29.746 47.499 7.610 -1.326 1.364 H51 PZN 51
PZN H52 2H5 H 0 1 N N N N N N -89.954 28.472 46.771 8.470 -0.088 0.417 H52 PZN 52
PZN H61 1H6 H 0 1 N N N N N N -90.939 26.743 48.203 7.077 -0.631 -1.560 H61 PZN 53
PZN H62 2H6 H 0 1 N N N N N N -91.369 27.866 49.447 6.216 -1.869 -0.614 H62 PZN 54
PZN H71 1H7 H 0 1 N N N N N N -93.892 27.574 46.011 5.794 2.216 0.004 H71 PZN 55
PZN H72 2H7 H 0 1 N N N N N N -92.222 28.333 45.835 7.414 1.486 0.112 H72 PZN 56
PZN H73 3H7 H 0 1 N N N N N N -92.296 26.654 46.057 6.550 1.507 -1.443 H73 PZN 57
PZN H81 1H8 H 0 1 N N N N N N -92.886 29.580 48.961 4.781 0.370 -1.847 H81 PZN 58
PZN H82 2H8 H 0 1 N N N N N N -93.555 29.688 47.374 4.257 -1.014 -0.858 H82 PZN 59
PZN H10 H10 H 0 1 N N N N N N -95.840 29.172 46.889 1.822 -0.044 -1.087 H10 PZN 60
PZN HN2 HN2 H 0 1 N N N N N N -95.870 26.516 48.409 1.545 2.123 0.851 HN2 PZN 61
PZN H111 1H11 H 0 0 N N N N N N -98.029 28.136 48.645 2.954 1.435 -2.759 H111 PZN 62
PZN H112 2H11 H 0 0 N N N N N N -97.361 29.583 49.276 1.233 1.839 -2.551 H112 PZN 63
PZN H14 H14 H 0 1 N N N N N N -97.765 25.161 47.183 -1.007 2.870 1.135 H14 PZN 64
PZN H151 1H15 H 0 0 N N N N N N -94.906 23.952 46.601 -0.777 0.137 2.472 H151 PZN 65
PZN H152 2H15 H 0 0 N N N N N N -95.105 24.905 48.001 0.393 1.463 2.675 H152 PZN 66
PZN H161 1H16 H 0 0 N N N N N N -95.418 22.435 48.599 -1.409 2.919 3.557 H161 PZN 67
PZN H162 2H16 H 0 0 N N N N N N -97.010 23.317 48.811 -2.579 1.593 3.355 H162 PZN 68
PZN H163 3H16 H 0 0 N N N N N N -96.811 22.364 47.411 -1.252 1.437 4.530 H163 PZN 69
PZN H24 H24 H 0 1 N N N N N N -95.147 23.569 44.785 -3.161 3.328 0.642 H24 PZN 70
PZN H231 1H23 H 0 0 N N N N N N -93.448 21.638 42.334 -4.282 4.461 -0.513 H231 PZN 71
PZN H232 2H23 H 0 0 N N N N N N -93.866 23.334 42.914 -5.848 5.094 0.048 H232 PZN 72
PZN H233 3H23 H 0 0 N N N N N N -93.972 22.072 44.044 -4.684 4.431 1.221 H233 PZN 73
PZN H211 1H21 H 0 0 N N N N N N -95.111 21.770 40.456 -6.712 1.817 -1.492 H211 PZN 74
PZN H212 2H21 H 0 0 N N N N N N -96.862 22.285 40.749 -7.032 3.567 -1.536 H212 PZN 75
PZN H213 3H21 H 0 0 N N N N N N -95.675 23.477 40.889 -5.466 2.934 -2.097 H213 PZN 76
PZN H221 1H22 H 0 0 N N N N N N -95.279 19.932 42.156 -6.434 2.862 2.070 H221 PZN 77
PZN H222 2H22 H 0 0 N N N N N N -95.955 20.251 43.853 -7.597 3.525 0.898 H222 PZN 78
PZN H223 3H22 H 0 0 N N N N N N -97.043 20.326 42.573 -7.278 1.775 0.942 H223 PZN 79
PZN HN5 HN5 H 0 1 N N N N N N -100.440 24.302 42.832 -3.785 -2.370 0.400 HN5 PZN 80
PZN H251 1H25 H 0 0 N N N N N N -101.535 22.709 41.690 -6.501 -1.654 0.695 H251 PZN 81
PZN H252 2H25 H 0 0 N N N N N N -99.934 22.243 41.441 -6.097 -1.624 -1.039 H252 PZN 82
PZN H281 1H28 H 0 0 N N N N N N -103.805 21.287 45.447 -6.311 -3.606 -3.202 H281 PZN 83
PZN H282 2H28 H 0 0 N N N N N N -102.521 22.452 45.088 -4.819 -2.900 -2.538 H282 PZN 84
PZN H283 3H28 H 0 0 N N N N N N -103.627 21.953 43.816 -4.811 -4.563 -3.171 H283 PZN 85
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PZN C1 C2 SING N N 1
PZN C1 H11 SING N N 2
PZN C1 H12 SING N N 3
PZN C1 H13 SING N N 4
PZN C2 C3 SING N N 5
PZN C2 H21 SING N N 6
PZN C2 H22 SING N N 7
PZN C3 C4 SING N N 8
PZN C3 H31 SING N N 9
PZN C3 H32 SING N N 10
PZN C4 C5 SING N N 11
PZN C4 H41 SING N N 12
PZN C4 H42 SING N N 13
PZN C5 C6 SING N N 14
PZN C5 H51 SING N N 15
PZN C5 H52 SING N N 16
PZN C6 N1 SING N N 17
PZN C6 H61 SING N N 18
PZN C6 H62 SING N N 19
PZN N1 C7 SING N N 20
PZN N1 C8 SING N N 21
PZN C7 H71 SING N N 22
PZN C7 H72 SING N N 23
PZN C7 H73 SING N N 24
PZN C8 C9 SING N N 25
PZN C8 H81 SING N N 26
PZN C8 H82 SING N N 27
PZN C9 O1 DOUB N N 28
PZN C9 C10 SING N N 29
PZN C10 N2 SING N N 30
PZN C10 C11 SING N N 31
PZN C10 H10 SING N N 32
PZN N2 C13 SING N N 33
PZN N2 HN2 SING N N 34
PZN C11 C12 SING N N 35
PZN C11 H111 SING N N 36
PZN C11 H112 SING N N 37
PZN C12 O2 SING N N 38
PZN C12 O3 DOUB N N 39
PZN C13 C14 SING N N 40
PZN C13 O4 DOUB N N 41
PZN C14 C15 SING N N 42
PZN C14 N3 SING N N 43
PZN C14 H14 SING N N 44
PZN C15 C16 SING N N 45
PZN C15 H151 SING N N 46
PZN C15 H152 SING N N 47
PZN C16 H161 SING N N 48
PZN C16 H162 SING N N 49
PZN C16 H163 SING N N 50
PZN N3 C24 SING Y N 51
PZN N3 C17 SING Y N 52
PZN C18 N4 DOUB Y N 53
PZN C18 C17 SING Y N 54
PZN C18 N5 SING N N 55
PZN N4 C19 SING Y N 56
PZN C19 C24 DOUB Y N 57
PZN C19 C20 SING N N 58
PZN C24 H24 SING N N 59
PZN C17 O5 DOUB N N 60
PZN C20 C23 SING N N 61
PZN C20 C21 SING N N 62
PZN C20 C22 SING N N 63
PZN C23 H231 SING N N 64
PZN C23 H232 SING N N 65
PZN C23 H233 SING N N 66
PZN C21 H211 SING N N 67
PZN C21 H212 SING N N 68
PZN C21 H213 SING N N 69
PZN C22 H221 SING N N 70
PZN C22 H222 SING N N 71
PZN C22 H223 SING N N 72
PZN N5 C25 SING N N 73
PZN N5 HN5 SING N N 74
PZN C25 C26 SING N N 75
PZN C25 H251 SING N N 76
PZN C25 H252 SING N N 77
PZN C26 C27 SING Y N 78
PZN C26 N6 DOUB Y N 79
PZN C27 N7 DOUB Y N 80
PZN C27 C28 SING N N 81
PZN N7 O6 SING Y N 82
PZN O6 N6 SING Y N 83
PZN C28 H281 SING N N 84
PZN C28 H282 SING N N 85
PZN C28 H283 SING N N 86
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PZN SMILES ACDLabs 10.04 "[O-]C(=O)CC(C(=O)CN(CCCCCC)C)NC(=O)C(N1C(=O)C(=NC(=C1)C(C)(C)C)NCc2nonc2C)CC"
PZN SMILES_CANONICAL CACTVS 3.341 "CCCCCCN(C)CC(=O)[C@H](CC([O-])=O)NC(=O)[C@H](CC)N1C=C(N=C(NCc2nonc2C)C1=O)C(C)(C)C"
PZN SMILES CACTVS 3.341 "CCCCCCN(C)CC(=O)[CH](CC([O-])=O)NC(=O)[CH](CC)N1C=C(N=C(NCc2nonc2C)C1=O)C(C)(C)C"
PZN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCC[N@](C)CC(=O)[C@H](CC(=O)[O-])NC(=O)[C@H](CC)N1C=C(N=C(C1=O)NCc2c(non2)C)C(C)(C)C"
PZN SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCN(C)CC(=O)C(CC(=O)[O-])NC(=O)C(CC)N1C=C(N=C(C1=O)NCc2c(non2)C)C(C)(C)C"
PZN InChI InChI 1.03 "InChI=1S/C28H45N7O6/c1-8-10-11-12-13-34(7)16-22(36)19(14-24(37)38)30-26(39)21(9-2)35-17-23(28(4,5)6)31-25(27(35)40)29-15-20-18(3)32-41-33-20/h17,19,21H,8-16H2,1-7H3,(H,29,31)(H,30,39)(H,37,38)/p-1/t19-,21-/m0/s1"
PZN InChIKey InChI 1.03 XIMITGPWYYFUQF-FPOVZHCZSA-M
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PZN "SYSTEMATIC NAME" ACDLabs 10.04 "(3S)-3-({(2S)-2-[5-tert-butyl-3-{[(4-methyl-1,2,5-oxadiazol-3-yl)methyl]amino}-2-oxopyrazin-1(2H)-yl]butanoyl}amino)-5-[hexyl(methyl)amino]-4-oxopentanoate"
PZN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3S)-3-[[(2S)-2-[5-tert-butyl-3-[(4-methyl-1,2,5-oxadiazol-3-yl)methylamino]-2-oxo-pyrazin-1-yl]butanoyl]amino]-5-(hexyl-methyl-amino)-4-oxo-pentanoate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PZN "Create component" 2003-11-19 RCSB
PZN "Modify descriptor" 2011-06-04 RCSB
PZN "Modify PCM" 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id PZN
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category "Covalent chemical modification"
_pdbx_chem_comp_pcm.position "Amino-acid side chain"
_pdbx_chem_comp_pcm.polypeptide_position "Any position"
_pdbx_chem_comp_pcm.comp_id_linking_atom C9
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#