data_Q41
#
_chem_comp.id Q41
_chem_comp.name "2-amino-3-{[(5P)-2-[(3,5-dimethoxyphenyl)methyl]-5-(4-fluoro-2-methylphenyl)-1-oxo-1,2,3,4-tetrahydroisoquinolin-7-yl]methyl}-1-methyl-1H-imidazol-3-ium"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H32 F N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2019-09-19
_chem_comp.pdbx_modified_date 2024-05-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 515.598
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Q41
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6UCS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q41 C10 C1 C 0 1 N N N N N N -16.045 33.970 3.940 3.945 1.986 1.190 C10 Q41 1
Q41 C13 C2 C 0 1 Y N N N N N -13.617 33.599 3.037 3.215 3.899 -0.187 C13 Q41 2
Q41 C15 C3 C 0 1 Y N N N N N -13.511 31.341 3.379 4.455 3.605 -1.981 C15 Q41 3
Q41 C17 C4 C 0 1 Y N N N N N -19.991 30.625 8.400 2.564 -4.903 -0.054 C17 Q41 4
Q41 C20 C5 C 0 1 Y N N N N N -17.938 31.833 7.971 2.335 -2.521 -0.240 C20 Q41 5
Q41 C21 C6 C 0 1 Y N N N N N -17.201 30.757 8.475 2.601 -2.604 -1.606 C21 Q41 6
Q41 C22 C7 C 0 1 Y N N N N N -17.847 29.623 8.957 2.852 -3.831 -2.184 C22 Q41 7
Q41 C24 C8 C 0 1 Y N N N N N -11.863 37.061 12.989 -4.711 1.574 -0.502 C24 Q41 8
Q41 C26 C9 C 0 1 Y N N N N N -13.120 37.322 12.435 -3.977 1.385 0.660 C26 Q41 9
Q41 C28 C10 C 0 1 Y N N N N N -12.511 36.062 10.469 -4.504 -0.951 0.618 C28 Q41 10
Q41 C01 C11 C 0 1 N N N N N N -14.822 37.132 10.589 -3.072 -0.080 2.476 C01 Q41 11
Q41 C02 C12 C 0 1 N N N N N N -15.483 36.178 8.406 -0.798 0.622 1.988 C02 Q41 12
Q41 C03 C13 C 0 1 Y N N N N N -15.996 35.069 7.619 0.553 0.331 1.463 C03 Q41 13
Q41 C04 C14 C 0 1 Y N N N N N -16.711 34.039 8.245 0.796 -0.906 0.866 C04 Q41 14
Q41 C05 C15 C 0 1 N N N N N N -16.912 34.093 9.760 -0.326 -1.903 0.742 C05 Q41 15
Q41 C06 C16 C 0 1 N N N N N N -15.672 34.722 10.429 -1.278 -1.774 1.928 C06 Q41 16
Q41 C07 C17 C 0 1 Y N N N N N -17.200 32.984 7.462 2.065 -1.203 0.387 C07 Q41 17
Q41 C08 C18 C 0 1 Y N N N N N -16.970 32.991 6.081 3.085 -0.257 0.497 C08 Q41 18
Q41 C09 C19 C 0 1 Y N N N N N -16.275 34.021 5.454 2.837 0.970 1.080 C09 Q41 19
Q41 C11 C20 C 0 1 Y N N N N N -15.787 35.058 6.233 1.578 1.270 1.564 C11 Q41 20
Q41 C12 C21 C 0 1 N N N N N N -11.451 32.475 2.383 2.899 5.610 -2.015 C12 Q41 21
Q41 C14 C22 C 0 1 Y N N N N N -14.749 31.651 3.778 4.720 2.631 -1.093 C14 Q41 22
Q41 C16 C23 C 0 1 Y N N N N N -19.228 29.578 8.905 2.828 -4.981 -1.412 C16 Q41 23
Q41 C18 C24 C 0 1 Y N N N N N -19.347 31.765 7.924 2.318 -3.679 0.534 C18 Q41 24
Q41 C19 C25 C 0 1 N N N N N N -20.169 32.909 7.369 2.031 -3.596 2.011 C19 Q41 25
Q41 C23 C26 C 0 1 Y N N N N N -10.927 36.304 12.297 -5.348 0.498 -1.101 C23 Q41 26
Q41 C25 C27 C 0 1 N N N N N N -11.908 38.804 14.792 -5.583 2.935 -2.246 C25 Q41 27
Q41 C27 C28 C 0 1 Y N N N N N -13.451 36.820 11.172 -3.875 0.124 1.217 C27 Q41 28
Q41 C29 C29 C 0 1 Y N N N N N -11.259 35.810 11.042 -5.244 -0.765 -0.541 C29 Q41 29
Q41 C30 C30 C 0 1 N N N N N N -10.393 34.625 9.030 -6.607 -1.559 -2.320 C30 Q41 30
Q41 F01 F1 F 0 1 N N N N N N -19.855 28.473 9.373 3.064 -6.182 -1.984 F01 Q41 31
Q41 N01 N1 N 0 1 N N N N N N -15.322 36.006 9.772 -1.683 -0.384 2.125 N01 Q41 32
Q41 N02 N2 N 0 1 Y N N N N N -12.811 32.475 2.933 3.498 4.416 -1.413 N02 Q41 33
Q41 N03 N3 N 1 1 Y N N N N N -14.818 33.152 3.746 3.954 2.830 -0.007 N03 Q41 34
Q41 N04 N4 N 0 1 N N N N N N -13.316 34.780 2.777 2.306 4.418 0.720 N04 Q41 35
Q41 O01 O1 O 0 1 N N N N N N -15.183 37.255 7.891 -1.105 1.757 2.297 O01 Q41 36
Q41 O02 O2 O 0 1 N N N N N N -11.490 37.537 14.232 -4.811 2.814 -1.049 O02 Q41 37
Q41 O03 O3 O 0 1 N N N N N N -10.292 35.070 10.400 -5.863 -1.823 -1.129 O03 Q41 38
Q41 H1 H1 H 0 1 N N N N N N -15.897 34.984 3.540 3.782 2.606 2.071 H1 Q41 39
Q41 H2 H2 H 0 1 N N N N N N -16.903 33.499 3.437 4.902 1.472 1.279 H2 Q41 40
Q41 H3 H3 H 0 1 N N N N N N -13.100 30.342 3.397 4.905 3.727 -2.954 H3 Q41 41
Q41 H4 H4 H 0 1 N N N N N N -21.069 30.555 8.377 2.547 -5.802 0.544 H4 Q41 42
Q41 H5 H5 H 0 1 N N N N N N -16.122 30.807 8.490 2.611 -1.709 -2.210 H5 Q41 43
Q41 H6 H6 H 0 1 N N N N N N -17.283 28.796 9.363 3.058 -3.896 -3.242 H6 Q41 44
Q41 H7 H7 H 0 1 N N N N N N -13.838 37.913 12.984 -3.485 2.224 1.130 H7 Q41 45
Q41 H8 H8 H 0 1 N N N N N N -12.749 35.673 9.490 -4.423 -1.935 1.055 H8 Q41 46
Q41 H9 H9 H 0 1 N N N N N N -14.748 38.029 9.957 -3.104 0.828 3.078 H9 Q41 47
Q41 H10 H10 H 0 1 N N N N N N -15.528 37.320 11.412 -3.493 -0.909 3.045 H10 Q41 48
Q41 H11 H11 H 0 1 N N N N N N -17.799 34.702 9.989 -0.873 -1.718 -0.182 H11 Q41 49
Q41 H12 H12 H 0 1 N N N N N N -17.057 33.073 10.146 0.088 -2.911 0.719 H12 Q41 50
Q41 H13 H13 H 0 1 N N N N N N -15.888 34.906 11.492 -2.163 -2.382 1.745 H13 Q41 51
Q41 H14 H14 H 0 1 N N N N N N -14.823 34.028 10.343 -0.778 -2.131 2.829 H14 Q41 52
Q41 H15 H15 H 0 1 N N N N N N -17.343 32.172 5.484 4.073 -0.486 0.125 H15 Q41 53
Q41 H16 H16 H 0 1 N N N N N N -15.241 35.865 5.768 1.388 2.231 2.020 H16 Q41 54
Q41 H17 H17 H 0 1 N N N N N N -11.041 31.455 2.418 3.490 6.486 -1.749 H17 Q41 55
Q41 H18 H18 H 0 1 N N N N N N -11.477 32.823 1.340 2.881 5.500 -3.099 H18 Q41 56
Q41 H19 H19 H 0 1 N N N N N N -10.815 33.147 2.978 1.882 5.732 -1.645 H19 Q41 57
Q41 H20 H20 H 0 1 N N N N N N -15.534 30.967 4.063 5.427 1.827 -1.229 H20 Q41 58
Q41 H21 H21 H 0 1 N N N N N N -20.318 32.764 6.289 0.970 -3.778 2.185 H21 Q41 59
Q41 H22 H22 H 0 1 N N N N N N -21.146 32.936 7.873 2.620 -4.345 2.539 H22 Q41 60
Q41 H23 H23 H 0 1 N N N N N N -19.640 33.858 7.542 2.293 -2.603 2.376 H23 Q41 61
Q41 H24 H24 H 0 1 N N N N N N -9.957 36.103 12.727 -5.924 0.645 -2.003 H24 Q41 62
Q41 H25 H25 H 0 1 N N N N N N -11.464 38.928 15.791 -6.607 2.618 -2.051 H25 Q41 63
Q41 H26 H26 H 0 1 N N N N N N -11.573 39.622 14.138 -5.581 3.974 -2.575 H26 Q41 64
Q41 H27 H27 H 0 1 N N N N N N -13.005 38.825 14.873 -5.149 2.306 -3.023 H27 Q41 65
Q41 H28 H28 H 0 1 N N N N N N -9.491 34.055 8.762 -7.398 -0.841 -2.102 H28 Q41 66
Q41 H29 H29 H 0 1 N N N N N N -11.279 33.983 8.917 -5.943 -1.148 -3.080 H29 Q41 67
Q41 H30 H30 H 0 1 N N N N N N -10.486 35.498 8.367 -7.048 -2.486 -2.686 H30 Q41 68
Q41 H31 H31 H 0 1 N N N N N N -13.921 35.524 3.060 2.173 3.982 1.576 H31 Q41 69
Q41 H32 H32 H 0 1 N N N N N N -12.469 34.984 2.286 1.802 5.217 0.499 H32 Q41 70
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q41 C12 N02 SING N N 1
Q41 N04 C13 SING N N 2
Q41 N02 C13 SING Y N 3
Q41 N02 C15 SING Y N 4
Q41 C13 N03 DOUB Y N 5
Q41 C15 C14 DOUB Y N 6
Q41 N03 C14 SING Y N 7
Q41 N03 C10 SING N N 8
Q41 C10 C09 SING N N 9
Q41 C09 C08 DOUB Y N 10
Q41 C09 C11 SING Y N 11
Q41 C08 C07 SING Y N 12
Q41 C11 C03 DOUB Y N 13
Q41 C19 C18 SING N N 14
Q41 C07 C20 SING N N 15
Q41 C07 C04 DOUB Y N 16
Q41 C03 C04 SING Y N 17
Q41 C03 C02 SING N N 18
Q41 O01 C02 DOUB N N 19
Q41 C18 C20 DOUB Y N 20
Q41 C18 C17 SING Y N 21
Q41 C20 C21 SING Y N 22
Q41 C04 C05 SING N N 23
Q41 C17 C16 DOUB Y N 24
Q41 C02 N01 SING N N 25
Q41 C21 C22 DOUB Y N 26
Q41 C16 C22 SING Y N 27
Q41 C16 F01 SING N N 28
Q41 C30 O03 SING N N 29
Q41 C05 C06 SING N N 30
Q41 N01 C06 SING N N 31
Q41 N01 C01 SING N N 32
Q41 O03 C29 SING N N 33
Q41 C28 C29 DOUB Y N 34
Q41 C28 C27 SING Y N 35
Q41 C01 C27 SING N N 36
Q41 C29 C23 SING Y N 37
Q41 C27 C26 DOUB Y N 38
Q41 C23 C24 DOUB Y N 39
Q41 C26 C24 SING Y N 40
Q41 C24 O02 SING N N 41
Q41 O02 C25 SING N N 42
Q41 C10 H1 SING N N 43
Q41 C10 H2 SING N N 44
Q41 C15 H3 SING N N 45
Q41 C17 H4 SING N N 46
Q41 C21 H5 SING N N 47
Q41 C22 H6 SING N N 48
Q41 C26 H7 SING N N 49
Q41 C28 H8 SING N N 50
Q41 C01 H9 SING N N 51
Q41 C01 H10 SING N N 52
Q41 C05 H11 SING N N 53
Q41 C05 H12 SING N N 54
Q41 C06 H13 SING N N 55
Q41 C06 H14 SING N N 56
Q41 C08 H15 SING N N 57
Q41 C11 H16 SING N N 58
Q41 C12 H17 SING N N 59
Q41 C12 H18 SING N N 60
Q41 C12 H19 SING N N 61
Q41 C14 H20 SING N N 62
Q41 C19 H21 SING N N 63
Q41 C19 H22 SING N N 64
Q41 C19 H23 SING N N 65
Q41 C23 H24 SING N N 66
Q41 C25 H25 SING N N 67
Q41 C25 H26 SING N N 68
Q41 C25 H27 SING N N 69
Q41 C30 H28 SING N N 70
Q41 C30 H29 SING N N 71
Q41 C30 H30 SING N N 72
Q41 N04 H31 SING N N 73
Q41 N04 H32 SING N N 74
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q41 SMILES ACDLabs 12.01 "Cn1cc[n+](Cc2cc(c3CCN(Cc4cc(OC)cc(OC)c4)C(=O)c3c2)c2ccc(F)cc2C)c1N"
Q41 InChI InChI 1.06 "InChI=1S/C30H31FN4O3/c1-19-11-22(31)5-6-25(19)27-14-21(18-35-10-9-33(2)30(35)32)15-28-26(27)7-8-34(29(28)36)17-20-12-23(37-3)16-24(13-20)38-4/h5-6,9-16,32H,7-8,17-18H2,1-4H3/p+1"
Q41 InChIKey InChI 1.06 PKONCIPMLLIAIL-UHFFFAOYSA-O
Q41 SMILES_CANONICAL CACTVS 3.385 "COc1cc(CN2CCc3c(cc(C[n+]4ccn(C)c4N)cc3c5ccc(F)cc5C)C2=O)cc(OC)c1"
Q41 SMILES CACTVS 3.385 "COc1cc(CN2CCc3c(cc(C[n+]4ccn(C)c4N)cc3c5ccc(F)cc5C)C2=O)cc(OC)c1"
Q41 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1c2cc(cc3c2CCN(C3=O)Cc4cc(cc(c4)OC)OC)C[n+]5ccn(c5N)C)F"
Q41 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1c2cc(cc3c2CCN(C3=O)Cc4cc(cc(c4)OC)OC)C[n+]5ccn(c5N)C)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q41 "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-3-{[(5P)-2-[(3,5-dimethoxyphenyl)methyl]-5-(4-fluoro-2-methylphenyl)-1-oxo-1,2,3,4-tetrahydroisoquinolin-7-yl]methyl}-1-methyl-1H-imidazol-3-ium"
Q41 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "7-[(2-azanyl-3-methyl-imidazol-1-ium-1-yl)methyl]-2-[(3,5-dimethoxyphenyl)methyl]-5-(4-fluoranyl-2-methyl-phenyl)-3,4-dihydroisoquinolin-1-one"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q41 "Create component" 2019-09-19 RCSB
Q41 "Initial release" 2020-01-01 RCSB
Q41 "Other modification" 2024-05-08 RCSB
#