data_Q52 # _chem_comp.id Q52 _chem_comp.name "~{N}-[(4-chlorophenyl)methyl]-1-[2-(6-methoxy-1,5-naphthyridin-4-yl)ethyl]piperidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H27 Cl N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-13 _chem_comp.pdbx_modified_date 2020-11-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.940 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q52 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Z1A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q52 C4 C1 C 0 1 Y N N 6.548 52.590 39.172 7.761 0.409 -0.029 C4 Q52 1 Q52 C14 C2 C 0 1 N N N 6.061 41.063 40.093 -4.238 -1.174 -0.503 C14 Q52 2 Q52 C5 C3 C 0 1 Y N N 6.393 51.848 40.361 6.785 -0.592 0.158 C5 Q52 3 Q52 C6 C4 C 0 1 Y N N 6.065 51.752 42.639 6.215 -2.819 0.347 C6 Q52 4 Q52 C11 C5 C 0 1 N N N 6.276 45.473 40.745 0.319 0.080 -1.749 C11 Q52 5 Q52 C7 C6 C 0 1 Y N N 6.098 50.347 42.660 4.868 -2.509 0.524 C7 Q52 6 Q52 C8 C7 C 0 1 Y N N 6.286 49.669 41.491 4.462 -1.206 0.518 C8 Q52 7 Q52 C9 C8 C 0 1 N N N 6.347 48.157 41.494 3.010 -0.848 0.706 C9 Q52 8 Q52 C10 C9 C 0 1 N N N 4.973 47.501 41.399 2.345 -0.674 -0.661 C10 Q52 9 Q52 C12 C10 C 0 1 N N N 6.130 44.056 40.202 -1.108 0.574 -1.496 C12 Q52 10 Q52 C13 C11 C 0 1 N N N 5.288 43.175 41.133 -1.924 -0.549 -0.851 C13 Q52 11 Q52 N1 N1 N 0 1 Y N N 6.205 52.498 41.558 7.118 -1.885 0.173 N1 Q52 12 Q52 N2 N2 N 0 1 N N N 4.959 46.060 41.068 0.930 -0.325 -0.477 N2 Q52 13 Q52 C3 C12 C 0 1 Y N N 6.742 51.929 37.996 7.360 1.712 -0.030 C3 Q52 14 Q52 N3 N3 N 0 1 N N N 4.925 41.901 40.490 -3.278 -0.063 -0.552 N3 Q52 15 Q52 C1 C13 C 0 1 N N N 6.829 48.485 36.782 4.233 3.594 0.340 C1 Q52 16 Q52 O1 O1 O 0 1 N N N 6.965 49.917 36.822 5.624 3.327 0.150 O1 Q52 17 Q52 C2 C14 C 0 1 Y N N 6.772 50.523 38.018 6.007 2.027 0.153 C2 Q52 18 Q52 C15 C15 C 0 1 Y N N 5.809 39.573 40.223 -5.612 -0.637 -0.195 C15 Q52 19 Q52 C16 C16 C 0 1 Y N N 6.245 38.882 41.344 -6.453 -0.261 -1.225 C16 Q52 20 Q52 C17 C17 C 0 1 Y N N 6.057 37.509 41.454 -7.714 0.231 -0.944 C17 Q52 21 Q52 C18 C18 C 0 1 Y N N 5.413 36.829 40.439 -8.133 0.347 0.370 C18 Q52 22 Q52 CL1 CL1 CL 0 0 N N N 5.176 35.108 40.592 -9.716 0.965 0.724 CL1 Q52 23 Q52 C19 C19 C 0 1 Y N N 4.970 37.482 39.310 -7.291 -0.030 1.400 C19 Q52 24 Q52 C20 C20 C 0 1 Y N N 5.171 38.862 39.211 -6.033 -0.527 1.117 C20 Q52 25 Q52 C21 C21 C 0 1 N N N 4.000 43.872 41.587 -1.240 -0.986 0.448 C21 Q52 26 Q52 C22 C22 C 0 1 N N N 4.281 45.267 42.100 0.191 -1.434 0.139 C22 Q52 27 Q52 C23 C23 C 0 1 Y N N 6.438 50.431 40.295 5.435 -0.205 0.331 C23 Q52 28 Q52 N4 N4 N 0 1 Y N N 6.629 49.789 39.090 5.101 1.089 0.327 N4 Q52 29 Q52 H1 H1 H 0 1 N N N 6.513 53.669 39.193 8.801 0.150 -0.164 H1 Q52 30 Q52 H2 H2 H 0 1 N N N 6.921 41.324 40.727 -4.254 -1.683 -1.467 H2 Q52 31 Q52 H3 H3 H 0 1 N N N 6.301 41.282 39.042 -3.940 -1.877 0.275 H3 Q52 32 Q52 H4 H4 H 0 1 N N N 5.913 52.261 43.579 6.523 -3.854 0.354 H4 Q52 33 Q52 H5 H5 H 0 1 N N N 6.890 45.446 41.657 0.293 -0.772 -2.428 H5 Q52 34 Q52 H6 H6 H 0 1 N N N 6.771 46.098 39.988 0.907 0.882 -2.195 H6 Q52 35 Q52 H7 H7 H 0 1 N N N 5.976 49.811 43.590 4.146 -3.300 0.665 H7 Q52 36 Q52 H8 H8 H 0 1 N N N 6.828 47.828 42.427 2.508 -1.644 1.256 H8 Q52 37 Q52 H9 H9 H 0 1 N N N 6.951 47.830 40.635 2.935 0.084 1.268 H9 Q52 38 Q52 H10 H10 H 0 1 N N N 4.402 48.029 40.622 2.848 0.122 -1.210 H10 Q52 39 Q52 H11 H11 H 0 1 N N N 4.473 47.627 42.371 2.420 -1.606 -1.222 H11 Q52 40 Q52 H12 H12 H 0 1 N N N 5.643 44.100 39.217 -1.082 1.435 -0.828 H12 Q52 41 Q52 H13 H13 H 0 1 N N N 7.130 43.610 40.097 -1.567 0.860 -2.442 H13 Q52 42 Q52 H14 H14 H 0 1 N N N 5.889 42.959 42.029 -1.983 -1.396 -1.534 H14 Q52 43 Q52 H16 H16 H 0 1 N N N 6.869 52.471 37.071 8.084 2.500 -0.170 H16 Q52 44 Q52 H17 H17 H 0 1 N N N 4.391 42.108 39.671 -3.567 0.635 -1.221 H17 Q52 45 Q52 H19 H19 H 0 1 N N N 7.011 48.127 35.758 3.659 3.117 -0.455 H19 Q52 46 Q52 H20 H20 H 0 1 N N N 7.560 48.028 37.465 3.915 3.197 1.304 H20 Q52 47 Q52 H21 H21 H 0 1 N N N 5.812 48.205 37.093 4.062 4.670 0.316 H21 Q52 48 Q52 H22 H22 H 0 1 N N N 6.737 39.418 42.142 -6.125 -0.351 -2.250 H22 Q52 49 Q52 H23 H23 H 0 1 N N N 6.411 36.979 42.326 -8.371 0.526 -1.749 H23 Q52 50 Q52 H24 H24 H 0 1 N N N 4.477 36.939 38.517 -7.618 0.060 2.425 H24 Q52 51 Q52 H25 H25 H 0 1 N N N 4.825 39.386 38.333 -5.375 -0.822 1.921 H25 Q52 52 Q52 H26 H26 H 0 1 N N N 3.308 43.936 40.734 -1.216 -0.149 1.146 H26 Q52 53 Q52 H27 H27 H 0 1 N N N 3.537 43.281 42.391 -1.793 -1.814 0.890 H27 Q52 54 Q52 H28 H28 H 0 1 N N N 4.924 45.204 42.990 0.166 -2.280 -0.549 H28 Q52 55 Q52 H29 H29 H 0 1 N N N 3.331 45.754 42.367 0.686 -1.733 1.063 H29 Q52 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q52 C1 O1 SING N N 1 Q52 O1 C2 SING N N 2 Q52 C3 C2 DOUB Y N 3 Q52 C3 C4 SING Y N 4 Q52 C2 N4 SING Y N 5 Q52 N4 C23 DOUB Y N 6 Q52 C4 C5 DOUB Y N 7 Q52 C20 C19 DOUB Y N 8 Q52 C20 C15 SING Y N 9 Q52 C19 C18 SING Y N 10 Q52 C14 C15 SING N N 11 Q52 C14 N3 SING N N 12 Q52 C12 C11 SING N N 13 Q52 C12 C13 SING N N 14 Q52 C15 C16 DOUB Y N 15 Q52 C23 C5 SING Y N 16 Q52 C23 C8 SING Y N 17 Q52 C5 N1 SING Y N 18 Q52 C18 CL1 SING N N 19 Q52 C18 C17 DOUB Y N 20 Q52 N3 C13 SING N N 21 Q52 C11 N2 SING N N 22 Q52 N2 C10 SING N N 23 Q52 N2 C22 SING N N 24 Q52 C13 C21 SING N N 25 Q52 C16 C17 SING Y N 26 Q52 C10 C9 SING N N 27 Q52 C8 C9 SING N N 28 Q52 C8 C7 DOUB Y N 29 Q52 N1 C6 DOUB Y N 30 Q52 C21 C22 SING N N 31 Q52 C6 C7 SING Y N 32 Q52 C4 H1 SING N N 33 Q52 C14 H2 SING N N 34 Q52 C14 H3 SING N N 35 Q52 C6 H4 SING N N 36 Q52 C11 H5 SING N N 37 Q52 C11 H6 SING N N 38 Q52 C7 H7 SING N N 39 Q52 C9 H8 SING N N 40 Q52 C9 H9 SING N N 41 Q52 C10 H10 SING N N 42 Q52 C10 H11 SING N N 43 Q52 C12 H12 SING N N 44 Q52 C12 H13 SING N N 45 Q52 C13 H14 SING N N 46 Q52 C3 H16 SING N N 47 Q52 N3 H17 SING N N 48 Q52 C1 H19 SING N N 49 Q52 C1 H20 SING N N 50 Q52 C1 H21 SING N N 51 Q52 C16 H22 SING N N 52 Q52 C17 H23 SING N N 53 Q52 C19 H24 SING N N 54 Q52 C20 H25 SING N N 55 Q52 C21 H26 SING N N 56 Q52 C21 H27 SING N N 57 Q52 C22 H28 SING N N 58 Q52 C22 H29 SING N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q52 InChI InChI 1.03 "InChI=1S/C23H27ClN4O/c1-29-22-7-6-21-23(27-22)18(8-12-25-21)9-13-28-14-10-20(11-15-28)26-16-17-2-4-19(24)5-3-17/h2-8,12,20,26H,9-11,13-16H2,1H3" Q52 InChIKey InChI 1.03 MLGPJPYFHAIWJL-UHFFFAOYSA-N Q52 SMILES_CANONICAL CACTVS 3.385 "COc1ccc2nccc(CCN3CCC(CC3)NCc4ccc(Cl)cc4)c2n1" Q52 SMILES CACTVS 3.385 "COc1ccc2nccc(CCN3CCC(CC3)NCc4ccc(Cl)cc4)c2n1" Q52 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(n1)c(ccn2)CCN3CCC(CC3)NCc4ccc(cc4)Cl" Q52 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(n1)c(ccn2)CCN3CCC(CC3)NCc4ccc(cc4)Cl" # _pdbx_chem_comp_identifier.comp_id Q52 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(4-chlorophenyl)methyl]-1-[2-(6-methoxy-1,5-naphthyridin-4-yl)ethyl]piperidin-4-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q52 "Create component" 2020-05-13 PDBE Q52 "Initial release" 2020-11-11 RCSB ##