data_Q55 # _chem_comp.id Q55 _chem_comp.name 4S/3694 _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H20 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-05-17 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 388.423 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q55 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Z1T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q55 N N1 N 0 1 N N N 33.413 12.404 -14.388 5.607 -0.138 -0.097 N Q55 1 Q55 C1 C1 C 0 1 Y N N 35.529 11.064 -17.170 2.543 2.045 -0.119 C1 Q55 2 Q55 C2 C2 C 0 1 Y N N 36.721 11.659 -16.767 1.601 1.023 -0.095 C2 Q55 3 Q55 O1 O1 O 0 1 N N N 43.800 12.796 -16.365 -4.901 -2.173 -0.694 O1 Q55 4 Q55 C19 C3 C 0 1 N N N 45.160 13.106 -16.019 -5.934 -3.071 -1.104 C19 Q55 5 Q55 C15 C4 C 0 1 Y N N 42.835 13.335 -15.626 -5.291 -0.989 -0.156 C15 Q55 6 Q55 N4 N2 N 0 1 Y N N 43.140 13.859 -14.451 -6.578 -0.717 -0.035 N4 Q55 7 Q55 C16 C5 C 0 1 Y N N 42.148 14.399 -13.727 -7.002 0.422 0.482 C16 Q55 8 Q55 C17 C6 C 0 1 Y N N 40.833 14.430 -14.136 -6.108 1.380 0.918 C17 Q55 9 Q55 C18 C7 C 0 1 Y N N 40.508 13.887 -15.357 -4.746 1.138 0.811 C18 Q55 10 Q55 C14 C8 C 0 1 Y N N 41.515 13.320 -16.139 -4.330 -0.072 0.269 C14 Q55 11 Q55 N3 N3 N 0 1 N N N 41.286 12.730 -17.385 -2.965 -0.363 0.145 N3 Q55 12 Q55 C13 C9 C 0 1 Y N N 40.162 12.127 -17.865 -2.046 0.665 0.015 C13 Q55 13 Q55 N1 N4 N 0 1 Y N N 40.265 11.554 -19.082 -2.484 1.910 -0.112 N1 Q55 14 Q55 C12 C10 C 0 1 Y N N 39.154 10.981 -19.542 -1.638 2.920 -0.238 C12 Q55 15 Q55 C11 C11 C 0 1 Y N N 37.960 10.945 -18.848 -0.278 2.668 -0.237 C11 Q55 16 Q55 C10 C12 C 0 1 Y N N 37.954 11.531 -17.594 0.154 1.345 -0.102 C10 Q55 17 Q55 C C13 C 0 1 Y N N 34.363 11.239 -16.431 3.901 1.740 -0.116 C Q55 18 Q55 C20 C14 C 0 1 N N N 33.174 10.555 -16.869 4.872 2.792 -0.139 C20 Q55 19 Q55 N5 N5 N 0 1 N N N 32.261 9.956 -17.221 5.642 3.627 -0.157 N5 Q55 20 Q55 C5 C15 C 0 1 Y N N 34.390 12.053 -15.296 4.321 0.394 -0.090 C5 Q55 21 Q55 C4 C16 C 0 1 Y N N 35.569 12.675 -14.907 3.363 -0.614 -0.060 C4 Q55 22 Q55 C3 C17 C 0 1 Y N N 36.724 12.492 -15.638 2.022 -0.310 -0.065 C3 Q55 23 Q55 C7 C18 C 0 1 N N S 35.352 13.480 -13.646 4.089 -1.945 -0.024 C7 Q55 24 Q55 C8 C19 C 0 1 N N N 36.009 14.861 -13.740 4.077 -2.607 -1.403 C8 Q55 25 Q55 C9 C20 C 0 1 N N N 35.924 12.702 -12.483 3.476 -2.870 1.029 C9 Q55 26 Q55 O O2 O 0 1 N N N 35.975 13.504 -11.307 4.180 -4.113 1.040 O Q55 27 Q55 C6 C21 C 0 1 N N N 33.820 13.576 -13.604 5.526 -1.537 0.375 C6 Q55 28 Q55 N2 N6 N 0 1 Y N N 39.049 12.143 -17.117 -0.754 0.380 0.026 N2 Q55 29 Q55 H2 H1 H 0 1 N N N 32.570 12.617 -14.881 6.013 -0.090 -1.020 H2 Q55 30 Q55 H H2 H 0 1 N N N 35.509 10.460 -18.065 2.221 3.076 -0.141 H Q55 31 Q55 H17 H3 H 0 1 N N N 45.842 12.593 -16.713 -6.553 -3.329 -0.244 H17 Q55 32 Q55 H19 H4 H 0 1 N N N 45.317 14.193 -16.088 -6.550 -2.593 -1.865 H19 Q55 33 Q55 H18 H5 H 0 1 N N N 45.362 12.770 -14.991 -5.486 -3.976 -1.514 H18 Q55 34 Q55 H14 H6 H 0 1 N N N 42.394 14.834 -12.770 -8.063 0.607 0.564 H14 Q55 35 Q55 H15 H7 H 0 1 N N N 40.072 14.872 -13.510 -6.466 2.308 1.339 H15 Q55 36 Q55 H16 H8 H 0 1 N N N 39.486 13.899 -15.706 -4.027 1.871 1.145 H16 Q55 37 Q55 H13 H9 H 0 1 N N N 42.061 12.754 -18.017 -2.664 -1.285 0.151 H13 Q55 38 Q55 H12 H10 H 0 1 N N N 39.189 10.516 -20.516 -2.005 3.930 -0.341 H12 Q55 39 Q55 H11 H11 H 0 1 N N N 37.076 10.483 -19.263 0.434 3.474 -0.339 H11 Q55 40 Q55 H1 H12 H 0 1 N N N 37.634 12.992 -15.340 1.290 -1.104 -0.045 H1 Q55 41 Q55 H7 H13 H 0 1 N N N 35.831 15.417 -12.807 4.572 -1.956 -2.124 H7 Q55 42 Q55 H6 H14 H 0 1 N N N 37.092 14.742 -13.895 4.603 -3.560 -1.353 H6 Q55 43 Q55 H5 H15 H 0 1 N N N 35.576 15.416 -14.586 3.046 -2.778 -1.715 H5 Q55 44 Q55 H8 H16 H 0 1 N N N 35.290 11.823 -12.292 3.550 -2.402 2.011 H8 Q55 45 Q55 H9 H17 H 0 1 N N N 36.942 12.372 -12.737 2.427 -3.048 0.790 H9 Q55 46 Q55 H10 H18 H 0 1 N N N 36.337 12.995 -10.591 3.843 -4.750 1.685 H10 Q55 47 Q55 H4 H19 H 0 1 N N N 33.466 14.508 -14.068 6.261 -2.160 -0.135 H4 Q55 48 Q55 H3 H20 H 0 1 N N N 33.445 13.515 -12.572 5.657 -1.589 1.456 H3 Q55 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q55 C12 N1 DOUB Y N 1 Q55 C12 C11 SING Y N 2 Q55 N1 C13 SING Y N 3 Q55 C11 C10 DOUB Y N 4 Q55 C13 N3 SING N N 5 Q55 C13 N2 DOUB Y N 6 Q55 C10 N2 SING Y N 7 Q55 C10 C2 SING N N 8 Q55 N3 C14 SING N N 9 Q55 N5 C20 TRIP N N 10 Q55 C1 C2 DOUB Y N 11 Q55 C1 C SING Y N 12 Q55 C20 C SING N N 13 Q55 C2 C3 SING Y N 14 Q55 C C5 DOUB Y N 15 Q55 O1 C19 SING N N 16 Q55 O1 C15 SING N N 17 Q55 C14 C15 DOUB Y N 18 Q55 C14 C18 SING Y N 19 Q55 C3 C4 DOUB Y N 20 Q55 C15 N4 SING Y N 21 Q55 C18 C17 DOUB Y N 22 Q55 C5 C4 SING Y N 23 Q55 C5 N SING N N 24 Q55 C4 C7 SING N N 25 Q55 N4 C16 DOUB Y N 26 Q55 N C6 SING N N 27 Q55 C17 C16 SING Y N 28 Q55 C8 C7 SING N N 29 Q55 C7 C6 SING N N 30 Q55 C7 C9 SING N N 31 Q55 C9 O SING N N 32 Q55 N H2 SING N N 33 Q55 C1 H SING N N 34 Q55 C19 H17 SING N N 35 Q55 C19 H19 SING N N 36 Q55 C19 H18 SING N N 37 Q55 C16 H14 SING N N 38 Q55 C17 H15 SING N N 39 Q55 C18 H16 SING N N 40 Q55 N3 H13 SING N N 41 Q55 C12 H12 SING N N 42 Q55 C11 H11 SING N N 43 Q55 C3 H1 SING N N 44 Q55 C8 H7 SING N N 45 Q55 C8 H6 SING N N 46 Q55 C8 H5 SING N N 47 Q55 C9 H8 SING N N 48 Q55 C9 H9 SING N N 49 Q55 O H10 SING N N 50 Q55 C6 H4 SING N N 51 Q55 C6 H3 SING N N 52 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q55 InChI InChI 1.03 "InChI=1S/C21H20N6O2/c1-21(12-28)11-25-18-14(10-22)8-13(9-15(18)21)16-5-7-24-20(26-16)27-17-4-3-6-23-19(17)29-2/h3-9,25,28H,11-12H2,1-2H3,(H,24,26,27)/t21-/m0/s1" Q55 InChIKey InChI 1.03 PTVSCHCHSJTBBB-NRFANRHFSA-N Q55 SMILES_CANONICAL CACTVS 3.385 "COc1ncccc1Nc2nccc(n2)c3cc(C#N)c4NC[C@@](C)(CO)c4c3" Q55 SMILES CACTVS 3.385 "COc1ncccc1Nc2nccc(n2)c3cc(C#N)c4NC[C](C)(CO)c4c3" Q55 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]1(CNc2c1cc(cc2C#N)c3ccnc(n3)Nc4cccnc4OC)CO" Q55 SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CNc2c1cc(cc2C#N)c3ccnc(n3)Nc4cccnc4OC)CO" # _pdbx_chem_comp_identifier.comp_id Q55 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q55 "Create component" 2020-05-17 PDBE Q55 "Initial release" 2020-07-08 RCSB Q55 "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id Q55 _pdbx_chem_comp_synonyms.name "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##