data_Q6R # _chem_comp.id Q6R _chem_comp.name "(R)-2-((R)-((R)-2-amino-2-phenylacetamido)(carboxy)methyl)-5-chloro-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H16 Cl N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms cefaclor _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-24 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 385.823 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q6R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ISR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q6R C10 C1 C 0 1 Y N N N N N 6.992 6.340 -33.627 -4.552 2.939 0.171 C10 Q6R 1 Q6R C13 C2 C 0 1 N N R N N N 10.648 1.458 -33.351 -0.261 -1.112 -0.238 C13 Q6R 2 Q6R C15 C3 C 0 1 N N N N N N 7.619 1.138 -29.806 4.376 -0.090 -1.364 C15 Q6R 3 Q6R C01 C4 C 0 1 Y N N N N N 7.435 5.333 -34.473 -4.145 1.742 0.731 C01 Q6R 4 Q6R C02 C5 C 0 1 N N R N N N 10.837 1.841 -31.881 0.788 -0.002 -0.137 C02 Q6R 5 Q6R C03 C6 C 0 1 Y N N N N N 8.760 5.294 -34.893 -4.402 0.551 0.078 C03 Q6R 6 Q6R C04 C7 C 0 1 Y N N N N N 9.651 6.260 -34.449 -5.066 0.556 -1.134 C04 Q6R 7 Q6R C05 C8 C 0 1 N N N N N N 9.215 4.220 -31.599 2.458 1.602 1.464 C05 Q6R 8 Q6R C06 C9 C 0 1 Y N N N N N 9.203 7.269 -33.602 -5.473 1.753 -1.694 C06 Q6R 9 Q6R C07 C10 C 0 1 N N N N N N 8.396 3.310 -30.724 3.466 1.115 0.463 C07 Q6R 10 Q6R C08 C11 C 0 1 Y N N N N N 7.874 7.315 -33.191 -5.216 2.944 -1.042 C08 Q6R 11 Q6R C09 C12 C 0 1 N N N N N N 8.522 1.981 -30.707 3.244 0.224 -0.478 C09 Q6R 12 Q6R C11 C13 C 0 1 N N R N N N 9.241 4.160 -35.799 -3.958 -0.753 0.688 C11 Q6R 13 Q6R C12 C14 C 0 1 N N N N N N 10.210 3.286 -34.998 -2.681 -1.207 0.030 C12 Q6R 14 Q6R C14 C15 C 0 1 N N N N N N 10.097 0.030 -33.431 0.249 -2.350 0.454 C14 Q6R 15 Q6R N17 N1 N 0 1 N N N N N N 9.974 4.640 -36.965 -5.001 -1.768 0.487 N17 Q6R 16 Q6R N18 N2 N 0 1 N N N N N N 9.710 2.297 -34.069 -1.503 -0.670 0.402 N18 Q6R 17 Q6R N19 N3 N 0 1 N N N N N N 9.754 1.279 -31.073 2.055 -0.455 -0.729 N19 Q6R 18 Q6R O20 O1 O 0 1 N N N N N N 11.381 3.412 -35.145 -2.714 -2.056 -0.836 O20 Q6R 19 Q6R O21 O2 O 0 1 N N N N N N 8.923 -0.171 -33.447 -0.362 -2.816 1.386 O21 Q6R 20 Q6R O22 O3 O 0 1 N N N N N N 6.379 1.331 -29.767 5.410 0.544 -1.277 O22 Q6R 21 Q6R O23 O4 O 0 1 N N N N N N 8.121 0.227 -29.099 4.268 -1.080 -2.272 O23 Q6R 22 Q6R S24 S1 S 0 1 N N N N N N 10.904 3.642 -31.639 1.118 0.381 1.614 S24 Q6R 23 Q6R CL16 CL1 CL 0 0 N N N N N N 6.899 4.094 -30.180 5.063 1.789 0.556 CL16 Q6R 24 Q6R H1 H1 H 0 1 N N N N N N 5.960 6.363 -33.309 -4.355 3.869 0.682 H1 Q6R 25 Q6R H2 H2 H 0 1 N N N N N N 11.628 1.485 -33.850 -0.453 -1.335 -1.288 H2 Q6R 26 Q6R H3 H3 H 0 1 N N N N N N 6.745 4.573 -34.808 -3.626 1.738 1.678 H3 Q6R 27 Q6R H4 H4 H 0 1 N N N N N N 11.805 1.453 -31.531 0.434 0.891 -0.652 H4 Q6R 28 Q6R H5 H5 H 0 1 N N N N N N 10.685 6.229 -34.759 -5.266 -0.374 -1.644 H5 Q6R 29 Q6R H6 H6 H 0 1 N N N N N N 9.186 5.242 -31.194 2.941 1.733 2.432 H6 Q6R 30 Q6R H7 H7 H 0 1 N N N N N N 8.802 4.218 -32.619 2.046 2.554 1.131 H7 Q6R 31 Q6R H8 H8 H 0 1 N N N N N N 9.894 8.025 -33.260 -5.992 1.757 -2.641 H8 Q6R 32 Q6R H10 H10 H 0 1 N N N N N N 7.533 8.104 -32.537 -5.537 3.879 -1.477 H10 Q6R 33 Q6R H12 H12 H 0 1 N N N N N N 8.379 3.554 -36.113 -3.787 -0.615 1.756 H12 Q6R 34 Q6R H14 H14 H 0 1 N N N N N N 9.376 5.218 -37.520 -5.178 -1.914 -0.496 H14 Q6R 35 Q6R H15 H15 H 0 1 N N N N N N 10.767 5.171 -36.665 -4.755 -2.634 0.943 H15 Q6R 36 Q6R H17 H17 H 0 1 N N N N N N 8.726 2.193 -33.923 -1.476 0.008 1.095 H17 Q6R 37 Q6R H18 H18 H 0 1 N N N N N N 9.457 0.458 -31.561 2.062 -1.238 -1.302 H18 Q6R 38 Q6R H20 H20 H 0 1 N N N N N N 7.434 -0.208 -28.607 5.038 -1.249 -2.832 H20 Q6R 39 Q6R O1 O5 O 0 1 N N N N N N 10.879 -0.860 -32.738 1.382 -2.935 0.034 O1 Q6R 40 Q6R H9 H9 H 0 1 N N N N N N 10.330 -1.536 -32.358 1.669 -3.727 0.509 H9 Q6R 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q6R N17 C11 SING N N 1 Q6R C11 C12 SING N N 2 Q6R C11 C03 SING N N 3 Q6R O20 C12 DOUB N N 4 Q6R C12 N18 SING N N 5 Q6R C03 C01 DOUB Y N 6 Q6R C03 C04 SING Y N 7 Q6R C01 C10 SING Y N 8 Q6R C04 C06 DOUB Y N 9 Q6R N18 C13 SING N N 10 Q6R C10 C08 DOUB Y N 11 Q6R C06 C08 SING Y N 12 Q6R O21 C14 DOUB N N 13 Q6R C14 C13 SING N N 14 Q6R C13 C02 SING N N 15 Q6R C02 S24 SING N N 16 Q6R C02 N19 SING N N 17 Q6R S24 C05 SING N N 18 Q6R C05 C07 SING N N 19 Q6R N19 C09 SING N N 20 Q6R C07 C09 DOUB N N 21 Q6R C07 CL16 SING N N 22 Q6R C09 C15 SING N N 23 Q6R C15 O22 DOUB N N 24 Q6R C15 O23 SING N N 25 Q6R C10 H1 SING N N 26 Q6R C13 H2 SING N N 27 Q6R C01 H3 SING N N 28 Q6R C02 H4 SING N N 29 Q6R C04 H5 SING N N 30 Q6R C05 H6 SING N N 31 Q6R C05 H7 SING N N 32 Q6R C06 H8 SING N N 33 Q6R C08 H10 SING N N 34 Q6R C11 H12 SING N N 35 Q6R N17 H14 SING N N 36 Q6R N17 H15 SING N N 37 Q6R N18 H17 SING N N 38 Q6R N19 H18 SING N N 39 Q6R O23 H20 SING N N 40 Q6R C14 O1 SING N N 41 Q6R O1 H9 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q6R InChI InChI 1.06 "InChI=1S/C15H16ClN3O5S/c16-8-6-25-13(19-10(8)14(21)22)11(15(23)24)18-12(20)9(17)7-4-2-1-3-5-7/h1-5,9,11,13,19H,6,17H2,(H,18,20)(H,21,22)(H,23,24)/t9-,11+,13-/m1/s1" Q6R InChIKey InChI 1.06 BPKRUZRKWSLICC-SUZMYJTESA-N Q6R SMILES_CANONICAL CACTVS 3.385 "N[C@@H](C(=O)N[C@@H]([C@@H]1NC(=C(Cl)CS1)C(O)=O)C(O)=O)c2ccccc2" Q6R SMILES CACTVS 3.385 "N[CH](C(=O)N[CH]([CH]1NC(=C(Cl)CS1)C(O)=O)C(O)=O)c2ccccc2" Q6R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@H](C(=O)N[C@@H]([C@@H]2NC(=C(CS2)Cl)C(=O)O)C(=O)O)N" Q6R SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(C(=O)NC(C2NC(=C(CS2)Cl)C(=O)O)C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id Q6R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-phenyl-ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5-chloranyl-3,6-dihydro-2~{H}-1,3-thiazine-4-carboxylic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id Q6R _pdbx_chem_comp_synonyms.name cefaclor _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q6R "Create component" 2023-03-24 PDBJ Q6R "Modify name" 2023-03-27 PDBJ Q6R "Initial release" 2024-05-15 RCSB Q6R "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id Q6R _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C14 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #