data_Q82 # _chem_comp.id Q82 _chem_comp.name ;{[4-R(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-1,3-BIS(4-HYDROXYMETHYL)METHYL]-4,7-BIS(PHENYLMETHYL) -2H-1,3-DIAZEPIN-2-YLIDENE]CYANAMIDE} ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H38 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Q8261 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 590.711 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q82 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HVH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q82 N11 N11 N 0 1 N N N -7.733 14.499 28.218 -0.694 -2.210 -0.901 N11 Q82 1 Q82 O4 O4 O 0 1 N N N -11.240 18.855 29.011 0.538 2.999 1.048 O4 Q82 2 Q82 O5 O5 O 0 1 N N N -9.379 19.557 27.138 0.568 0.987 3.295 O5 Q82 3 Q82 N7 N7 N 0 1 N N N -8.893 15.970 26.900 -0.167 -1.219 1.208 N7 Q82 4 Q82 N2 N2 N 0 1 N N N -9.502 15.575 29.117 -0.655 0.092 -0.614 N2 Q82 5 Q82 C1 C1 C 0 1 N N N -8.690 15.342 28.070 -0.514 -1.140 -0.146 C1 Q82 6 Q82 C2 C2 C 0 1 N N N -9.432 14.721 30.312 -1.881 0.427 -1.345 C2 Q82 7 Q82 C3 C3 C 0 1 N N R -10.591 16.549 29.045 0.361 1.135 -0.438 C3 Q82 8 Q82 C4 C4 C 0 1 N N S -10.174 17.987 28.712 0.196 1.613 0.985 C4 Q82 9 Q82 C5 C5 C 0 1 N N S -9.794 18.220 27.260 1.085 0.835 1.972 C5 Q82 10 Q82 C6 C6 C 0 1 N N R -8.607 17.390 26.821 1.100 -0.655 1.599 C6 Q82 11 Q82 C7 C7 C 0 1 N N N -9.346 15.293 25.675 -1.053 -1.854 2.187 C7 Q82 12 Q82 C20 C20 C 0 1 Y N N -9.707 15.436 31.619 -1.684 0.145 -2.812 C20 Q82 13 Q82 C21 C21 C 0 1 Y N N -8.825 16.408 32.080 -1.994 -1.100 -3.324 C21 Q82 14 Q82 C22 C22 C 0 1 Y N N -8.971 16.929 33.362 -1.813 -1.358 -4.670 C22 Q82 15 Q82 C23 C23 C 0 1 Y N N -10.062 16.430 34.230 -1.323 -0.371 -5.504 C23 Q82 16 Q82 C24 C24 C 0 1 Y N N -10.921 15.460 33.728 -1.013 0.875 -4.992 C24 Q82 17 Q82 C25 C25 C 0 1 Y N N -10.726 14.966 32.449 -1.198 1.134 -3.646 C25 Q82 18 Q82 C31 C31 C 0 1 N N N -11.647 15.910 28.129 1.761 0.555 -0.645 C31 Q82 19 Q82 C32 C32 C 0 1 Y N N -12.298 14.700 28.769 2.285 0.974 -1.994 C32 Q82 20 Q82 C33 C33 C 0 1 Y N N -12.053 13.385 28.383 3.004 2.148 -2.122 C33 Q82 21 Q82 C34 C34 C 0 1 Y N N -12.689 12.255 28.883 3.485 2.532 -3.360 C34 Q82 22 Q82 C35 C35 C 0 1 Y N N -13.666 12.432 29.847 3.246 1.743 -4.469 C35 Q82 23 Q82 C36 C36 C 0 1 Y N N -13.949 13.729 30.265 2.528 0.569 -4.341 C36 Q82 24 Q82 C37 C37 C 0 1 Y N N -13.286 14.848 29.747 2.051 0.182 -3.103 C37 Q82 25 Q82 C61 C61 C 0 1 N N N -7.365 17.634 27.683 1.621 -1.440 2.804 C61 Q82 26 Q82 C62 C62 C 0 1 Y N N -6.191 18.103 26.858 3.031 -1.007 3.114 C62 Q82 27 Q82 C63 C63 C 0 1 Y N N -6.383 19.085 25.894 3.258 -0.015 4.050 C63 Q82 28 Q82 C64 C64 C 0 1 Y N N -5.450 19.249 24.874 4.551 0.382 4.335 C64 Q82 29 Q82 C65 C65 C 0 1 Y N N -4.321 18.438 24.828 5.617 -0.211 3.684 C65 Q82 30 Q82 C66 C66 C 0 1 Y N N -4.124 17.453 25.789 5.389 -1.203 2.749 C66 Q82 31 Q82 C67 C67 C 0 1 Y N N -5.059 17.289 26.807 4.096 -1.604 2.467 C67 Q82 32 Q82 C70 C70 C 0 1 Y N N -8.773 15.814 24.355 -2.086 -0.859 2.649 C70 Q82 33 Q82 C71 C71 C 0 1 Y N N -7.524 16.130 24.172 -3.289 -0.750 1.976 C71 Q82 34 Q82 C72 C72 C 0 1 Y N N -6.991 16.600 22.974 -4.237 0.162 2.400 C72 Q82 35 Q82 C73 C73 C 0 1 Y N N -7.884 16.753 21.811 -3.983 0.964 3.496 C73 Q82 36 Q82 C74 C74 C 0 1 Y N N -9.213 16.415 22.024 -2.778 0.858 4.166 C74 Q82 37 Q82 C75 C75 C 0 1 Y N N -9.646 15.948 23.268 -1.832 -0.056 3.745 C75 Q82 38 Q82 C12 C12 C 0 1 N N N -7.145 13.959 27.200 -0.536 -3.447 -0.371 C12 Q82 39 Q82 N13 N13 N 0 1 N N N -6.626 13.456 26.281 -0.404 -4.484 0.072 N13 Q82 40 Q82 C76 C76 C 0 1 N N N -7.398 17.257 20.484 -5.017 1.958 3.958 C76 Q82 41 Q82 C26 C26 C 0 1 N N N -10.249 16.968 35.620 -1.125 -0.653 -6.971 C26 Q82 42 Q82 O76 O76 O 0 1 N N N -5.989 17.172 20.332 -5.881 1.338 4.912 O76 Q82 43 Q82 O26 O26 O 0 1 N N N -11.268 16.295 36.351 -2.320 -0.327 -7.684 O26 Q82 44 Q82 HO4 HO4 H 0 1 N N N -10.981 19.745 28.804 0.379 3.285 1.958 HO4 Q82 45 Q82 HO5 HO5 H 0 1 N N N -9.141 19.702 26.229 0.575 1.934 3.491 HO5 Q82 46 Q82 H21A 1H2 H 0 0 N N N -10.111 13.843 30.200 -2.705 -0.176 -0.966 H21A Q82 47 Q82 H22A 2H2 H 0 0 N N N -8.448 14.198 30.356 -2.110 1.483 -1.205 H22A Q82 48 Q82 H3 H3 H 0 1 N N N -11.025 16.739 30.053 0.186 1.955 -1.135 H3 Q82 49 Q82 H4 H4 H 0 1 N N N -9.264 18.182 29.326 -0.846 1.493 1.279 H4 Q82 50 Q82 H5 H5 H 0 1 N N N -10.681 17.952 26.640 2.101 1.228 1.932 H5 Q82 51 Q82 H6 H6 H 0 1 N N N -8.409 17.704 25.769 1.802 -0.793 0.776 H6 Q82 52 Q82 H71A 1H7 H 0 0 N N N -9.156 14.197 25.759 -0.467 -2.192 3.042 H71A Q82 53 Q82 H72A 2H7 H 0 0 N N N -10.460 15.303 25.630 -1.550 -2.708 1.727 H72A Q82 54 Q82 H21 H21 H 0 1 N N N -8.009 16.765 31.428 -2.377 -1.871 -2.673 H21 Q82 55 Q82 H22 H22 H 0 1 N N N -8.252 17.704 33.676 -2.055 -2.332 -5.070 H22 Q82 56 Q82 H24 H24 H 0 1 N N N -11.755 15.083 34.343 -0.630 1.646 -5.643 H24 Q82 57 Q82 H25 H25 H 0 1 N N N -11.401 14.175 32.080 -0.956 2.108 -3.246 H25 Q82 58 Q82 H311 1H31 H 0 0 N N N -12.409 16.657 27.808 2.427 0.926 0.134 H311 Q82 59 Q82 H312 2H31 H 0 0 N N N -11.217 15.657 27.131 1.715 -0.532 -0.595 H312 Q82 60 Q82 H33 H33 H 0 1 N N N -11.283 13.223 27.609 3.190 2.764 -1.255 H33 Q82 61 Q82 H34 H34 H 0 1 N N N -12.425 11.245 28.524 4.046 3.450 -3.460 H34 Q82 62 Q82 H35 H35 H 0 1 N N N -14.202 11.565 30.269 3.621 2.044 -5.437 H35 Q82 63 Q82 H36 H36 H 0 1 N N N -14.726 13.875 31.033 2.342 -0.047 -5.208 H36 Q82 64 Q82 H37 H37 H 0 1 N N N -13.544 15.855 30.112 1.490 -0.734 -3.002 H37 Q82 65 Q82 H611 1H61 H 0 0 N N N -7.582 18.341 28.516 0.984 -1.248 3.667 H611 Q82 66 Q82 H612 2H61 H 0 0 N N N -7.104 16.731 28.282 1.611 -2.506 2.575 H612 Q82 67 Q82 H63 H63 H 0 1 N N N -7.274 19.733 25.938 2.426 0.448 4.559 H63 Q82 68 Q82 H64 H64 H 0 1 N N N -5.605 20.021 24.102 4.729 1.157 5.066 H64 Q82 69 Q82 H65 H65 H 0 1 N N N -3.577 18.576 24.024 6.627 0.099 3.906 H65 Q82 70 Q82 H66 H66 H 0 1 N N N -3.231 16.806 25.744 6.221 -1.667 2.240 H66 Q82 71 Q82 H67 H67 H 0 1 N N N -4.902 16.512 27.574 3.918 -2.379 1.737 H67 Q82 72 Q82 H71 H71 H 0 1 N N N -6.893 15.994 25.066 -3.488 -1.377 1.120 H71 Q82 73 Q82 H72 H72 H 0 1 N N N -5.914 16.839 22.947 -5.177 0.247 1.874 H72 Q82 74 Q82 H74 H74 H 0 1 N N N -9.933 16.518 21.195 -2.579 1.485 5.022 H74 Q82 75 Q82 H75 H75 H 0 1 N N N -10.707 15.677 23.395 -0.892 -0.141 4.270 H75 Q82 76 Q82 H761 1H76 H 0 0 N N N -7.918 16.735 19.647 -5.603 2.297 3.104 H761 Q82 77 Q82 H762 2H76 H 0 0 N N N -7.753 18.297 20.301 -4.520 2.812 4.419 H762 Q82 78 Q82 H261 1H26 H 0 0 N N N -9.285 16.957 36.181 -0.300 -0.049 -7.349 H261 Q82 79 Q82 H262 2H26 H 0 0 N N N -10.437 18.066 35.597 -0.895 -1.709 -7.110 H262 Q82 80 Q82 H76 H76 H 0 1 N N N -5.681 17.491 19.491 -6.526 2.007 5.182 H76 Q82 81 Q82 HO6 HO6 H 0 1 N N N -11.386 16.635 37.230 -2.151 -0.522 -8.616 HO6 Q82 82 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q82 N11 C1 DOUB N N 1 Q82 N11 C12 SING N N 2 Q82 O4 C4 SING N N 3 Q82 O4 HO4 SING N N 4 Q82 O5 C5 SING N N 5 Q82 O5 HO5 SING N N 6 Q82 N7 C1 SING N N 7 Q82 N7 C6 SING N N 8 Q82 N7 C7 SING N N 9 Q82 N2 C1 SING N N 10 Q82 N2 C2 SING N N 11 Q82 N2 C3 SING N N 12 Q82 C2 C20 SING N N 13 Q82 C2 H21A SING N N 14 Q82 C2 H22A SING N N 15 Q82 C3 C4 SING N N 16 Q82 C3 C31 SING N N 17 Q82 C3 H3 SING N N 18 Q82 C4 C5 SING N N 19 Q82 C4 H4 SING N N 20 Q82 C5 C6 SING N N 21 Q82 C5 H5 SING N N 22 Q82 C6 C61 SING N N 23 Q82 C6 H6 SING N N 24 Q82 C7 C70 SING N N 25 Q82 C7 H71A SING N N 26 Q82 C7 H72A SING N N 27 Q82 C20 C21 DOUB Y N 28 Q82 C20 C25 SING Y N 29 Q82 C21 C22 SING Y N 30 Q82 C21 H21 SING N N 31 Q82 C22 C23 DOUB Y N 32 Q82 C22 H22 SING N N 33 Q82 C23 C24 SING Y N 34 Q82 C23 C26 SING N N 35 Q82 C24 C25 DOUB Y N 36 Q82 C24 H24 SING N N 37 Q82 C25 H25 SING N N 38 Q82 C31 C32 SING N N 39 Q82 C31 H311 SING N N 40 Q82 C31 H312 SING N N 41 Q82 C32 C33 DOUB Y N 42 Q82 C32 C37 SING Y N 43 Q82 C33 C34 SING Y N 44 Q82 C33 H33 SING N N 45 Q82 C34 C35 DOUB Y N 46 Q82 C34 H34 SING N N 47 Q82 C35 C36 SING Y N 48 Q82 C35 H35 SING N N 49 Q82 C36 C37 DOUB Y N 50 Q82 C36 H36 SING N N 51 Q82 C37 H37 SING N N 52 Q82 C61 C62 SING N N 53 Q82 C61 H611 SING N N 54 Q82 C61 H612 SING N N 55 Q82 C62 C63 DOUB Y N 56 Q82 C62 C67 SING Y N 57 Q82 C63 C64 SING Y N 58 Q82 C63 H63 SING N N 59 Q82 C64 C65 DOUB Y N 60 Q82 C64 H64 SING N N 61 Q82 C65 C66 SING Y N 62 Q82 C65 H65 SING N N 63 Q82 C66 C67 DOUB Y N 64 Q82 C66 H66 SING N N 65 Q82 C67 H67 SING N N 66 Q82 C70 C71 DOUB Y N 67 Q82 C70 C75 SING Y N 68 Q82 C71 C72 SING Y N 69 Q82 C71 H71 SING N N 70 Q82 C72 C73 DOUB Y N 71 Q82 C72 H72 SING N N 72 Q82 C73 C74 SING Y N 73 Q82 C73 C76 SING N N 74 Q82 C74 C75 DOUB Y N 75 Q82 C74 H74 SING N N 76 Q82 C75 H75 SING N N 77 Q82 C12 N13 TRIP N N 78 Q82 C76 O76 SING N N 79 Q82 C76 H761 SING N N 80 Q82 C76 H762 SING N N 81 Q82 C26 O26 SING N N 82 Q82 C26 H261 SING N N 83 Q82 C26 H262 SING N N 84 Q82 O76 H76 SING N N 85 Q82 O26 HO6 SING N N 86 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q82 SMILES ACDLabs 10.04 "N#C\N=C1\N(C(C(O)C(O)C(N1Cc2ccc(cc2)CO)Cc3ccccc3)Cc4ccccc4)Cc5ccc(cc5)CO" Q82 SMILES_CANONICAL CACTVS 3.341 "OCc1ccc(CN2[C@H](Cc3ccccc3)[C@H](O)[C@@H](O)[C@@H](Cc4ccccc4)N(Cc5ccc(CO)cc5)C2=NC#N)cc1" Q82 SMILES CACTVS 3.341 "OCc1ccc(CN2[CH](Cc3ccccc3)[CH](O)[CH](O)[CH](Cc4ccccc4)N(Cc5ccc(CO)cc5)C2=NC#N)cc1" Q82 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)C[C@@H]2[C@@H]([C@H]([C@H](N(C(=NC#N)N2Cc3ccc(cc3)CO)Cc4ccc(cc4)CO)Cc5ccccc5)O)O" Q82 SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CC2C(C(C(N(C(=NC#N)N2Cc3ccc(cc3)CO)Cc4ccc(cc4)CO)Cc5ccccc5)O)O" Q82 InChI InChI 1.03 "InChI=1S/C36H38N4O4/c37-25-38-36-39(21-28-11-15-30(23-41)16-12-28)32(19-26-7-3-1-4-8-26)34(43)35(44)33(20-27-9-5-2-6-10-27)40(36)22-29-13-17-31(24-42)18-14-29/h1-18,32-35,41-44H,19-24H2/t32-,33-,34+,35+/m1/s1" Q82 InChIKey InChI 1.03 VLCZFBGXHAKRLP-WDKGQIBQSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Q82 "SYSTEMATIC NAME" ACDLabs 10.04 "{(4R,5S,6S,7R)-4,7-dibenzyl-5,6-dihydroxy-1,3-bis[4-(hydroxymethyl)benzyl]-1,3-diazepan-2-ylidene}cyanamide" Q82 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(4R,5S,6S,7R)-5,6-dihydroxy-1,3-bis[[4-(hydroxymethyl)phenyl]methyl]-4,7-bis(phenylmethyl)-1,3-diazepan-2-ylidene]cyanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q82 "Create component" 1999-07-08 RCSB Q82 "Modify descriptor" 2011-06-04 RCSB Q82 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id Q82 _pdbx_chem_comp_synonyms.name Q8261 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##