data_Q8O # _chem_comp.id Q8O _chem_comp.name "2-(1H-benzimidazol-6-yl)-N-(4-methylpyridin-3-yl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-18 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 266.298 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q8O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GHL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q8O N1 N1 N 0 1 N N N N N N 8.311 -0.584 21.299 2.053 1.022 0.378 N1 Q8O 1 Q8O N3 N2 N 0 1 Y N N N N N 10.006 -5.257 24.509 -4.509 0.131 -1.689 N3 Q8O 2 Q8O C4 C1 C 0 1 Y N N N N N 7.776 -0.105 18.938 2.901 -1.244 0.315 C4 Q8O 3 Q8O C5 C2 C 0 1 Y N N N N N 7.409 -0.159 20.286 3.087 0.117 0.112 C5 Q8O 4 Q8O C6 C3 C 0 1 N N N N N N 9.420 0.107 21.652 0.770 0.609 0.345 C6 Q8O 5 Q8O C7 C4 C 0 1 N N N N N N 10.337 -0.576 22.649 -0.335 1.548 0.755 C7 Q8O 6 Q8O C8 C5 C 0 1 Y N N N N N 9.722 -1.634 23.537 -1.663 0.847 0.629 C8 Q8O 7 Q8O C10 C6 C 0 1 Y N N N N N 8.425 -2.192 25.516 -3.377 -0.501 1.614 C10 Q8O 8 Q8O C13 C7 C 0 1 Y N N N N N 9.715 -3.898 24.364 -3.583 0.263 -0.674 C13 Q8O 9 Q8O O O1 O 0 1 N N N N N N 9.704 1.199 21.178 0.506 -0.519 -0.015 O Q8O 10 Q8O N N3 N 0 1 Y N N N N N 6.963 0.326 17.964 3.874 -2.099 0.070 N Q8O 11 Q8O C3 C8 C 0 1 Y N N N N N 5.731 0.705 18.315 5.051 -1.704 -0.374 C3 Q8O 12 Q8O C2 C9 C 0 1 Y N N N N N 5.274 0.699 19.619 5.312 -0.365 -0.601 C2 Q8O 13 Q8O C1 C10 C 0 1 Y N N N N N 6.114 0.265 20.642 4.316 0.568 -0.362 C1 Q8O 14 Q8O C C11 C 0 1 N N N N N N 5.653 0.291 22.076 4.561 2.036 -0.598 C Q8O 15 Q8O C14 C12 C 0 1 Y N N N N N 10.137 -2.959 23.424 -2.360 0.910 -0.559 C14 Q8O 16 Q8O C12 C13 C 0 1 Y N N N N N 9.366 -5.616 25.605 -5.529 -0.631 -1.209 C12 Q8O 17 Q8O N2 N4 N 0 1 Y N N N N N 8.677 -4.607 26.188 -5.288 -0.976 0.022 N2 Q8O 18 Q8O C11 C14 C 0 1 Y N N N N N 8.880 -3.498 25.406 -4.101 -0.451 0.420 C11 Q8O 19 Q8O C9 C15 C 0 1 Y N N N N N 8.847 -1.277 24.564 -2.175 0.141 1.708 C9 Q8O 20 Q8O H1 H1 H 0 1 N N N N N N 8.116 -1.440 21.777 2.260 1.946 0.590 H1 Q8O 21 Q8O H2 H2 H 0 1 N N N N N N 10.572 -5.829 23.915 -4.446 0.513 -2.578 H2 Q8O 22 Q8O H3 H3 H 0 1 N N N N N N 8.770 -0.429 18.667 1.952 -1.605 0.683 H3 Q8O 23 Q8O H4 H4 H 0 1 N N N N N N 11.149 -1.052 22.080 -0.184 1.857 1.790 H4 Q8O 24 Q8O H5 H5 H 0 1 N N N N N N 10.755 0.204 23.303 -0.324 2.425 0.109 H5 Q8O 25 Q8O H6 H6 H 0 1 N N N N N N 7.763 -1.898 26.317 -3.766 -1.047 2.460 H6 Q8O 26 Q8O H7 H7 H 0 1 N N N N N N 5.056 1.034 17.538 5.823 -2.436 -0.563 H7 Q8O 27 Q8O H8 H8 H 0 1 N N N N N N 4.271 1.029 19.844 6.279 -0.051 -0.965 H8 Q8O 28 Q8O H9 H9 H 0 1 N N N N N N 5.182 -0.671 22.328 4.956 2.489 0.312 H9 Q8O 29 Q8O H10 H10 H 0 1 N N N N N N 6.517 0.460 22.736 5.281 2.159 -1.407 H10 Q8O 30 Q8O H11 H11 H 0 1 N N N N N N 4.924 1.103 22.212 3.624 2.522 -0.868 H11 Q8O 31 Q8O H12 H12 H 0 1 N N N N N N 10.783 -3.258 22.612 -1.957 1.461 -1.396 H12 Q8O 32 Q8O H13 H13 H 0 1 N N N N N N 9.389 -6.621 26.000 -6.410 -0.908 -1.768 H13 Q8O 33 Q8O H15 H15 H 0 1 N N N N N N 8.489 -0.260 24.619 -1.618 0.100 2.633 H15 Q8O 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q8O N C3 DOUB Y N 1 Q8O N C4 SING Y N 2 Q8O C3 C2 SING Y N 3 Q8O C4 C5 DOUB Y N 4 Q8O C2 C1 DOUB Y N 5 Q8O C5 C1 SING Y N 6 Q8O C5 N1 SING N N 7 Q8O C1 C SING N N 8 Q8O O C6 DOUB N N 9 Q8O N1 C6 SING N N 10 Q8O C6 C7 SING N N 11 Q8O C7 C8 SING N N 12 Q8O C14 C8 DOUB Y N 13 Q8O C14 C13 SING Y N 14 Q8O C8 C9 SING Y N 15 Q8O C13 N3 SING Y N 16 Q8O C13 C11 DOUB Y N 17 Q8O N3 C12 SING Y N 18 Q8O C9 C10 DOUB Y N 19 Q8O C11 C10 SING Y N 20 Q8O C11 N2 SING Y N 21 Q8O C12 N2 DOUB Y N 22 Q8O N1 H1 SING N N 23 Q8O N3 H2 SING N N 24 Q8O C4 H3 SING N N 25 Q8O C7 H4 SING N N 26 Q8O C7 H5 SING N N 27 Q8O C10 H6 SING N N 28 Q8O C3 H7 SING N N 29 Q8O C2 H8 SING N N 30 Q8O C H9 SING N N 31 Q8O C H10 SING N N 32 Q8O C H11 SING N N 33 Q8O C14 H12 SING N N 34 Q8O C12 H13 SING N N 35 Q8O C9 H15 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q8O SMILES ACDLabs 12.01 "Cc1ccncc1NC(=O)Cc1ccc2nc[NH]c2c1" Q8O InChI InChI 1.06 "InChI=1S/C15H14N4O/c1-10-4-5-16-8-14(10)19-15(20)7-11-2-3-12-13(6-11)18-9-17-12/h2-6,8-9H,7H2,1H3,(H,17,18)(H,19,20)" Q8O InChIKey InChI 1.06 NKCRZXILCCSPCY-UHFFFAOYSA-N Q8O SMILES_CANONICAL CACTVS 3.385 "Cc1ccncc1NC(=O)Cc2ccc3nc[nH]c3c2" Q8O SMILES CACTVS 3.385 "Cc1ccncc1NC(=O)Cc2ccc3nc[nH]c3c2" Q8O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)Cc2ccc3c(c2)[nH]cn3" Q8O SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)Cc2ccc3c(c2)[nH]cn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Q8O "SYSTEMATIC NAME" ACDLabs 12.01 "2-(1H-benzimidazol-6-yl)-N-(4-methylpyridin-3-yl)acetamide" Q8O "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(3~{H}-benzimidazol-5-yl)-~{N}-(4-methylpyridin-3-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q8O "Create component" 2023-08-18 RCSB Q8O "Initial release" 2023-11-08 RCSB #