data_Q9W # _chem_comp.id Q9W _chem_comp.name "N-(4-phenylbutyl)adenosine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H25 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-03 _chem_comp.pdbx_modified_date 2023-01-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 399.444 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Q9W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CY0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Q9W O O1 O 0 1 N N N -36.034 -0.299 16.362 -7.362 -1.623 0.762 O Q9W 1 Q9W C1 C1 C 0 1 N N R -34.668 -0.072 14.324 -5.001 -0.991 0.782 C1 Q9W 2 Q9W C2 C2 C 0 1 N N R -34.185 -1.810 15.901 -6.658 0.536 -0.142 C2 Q9W 3 Q9W C3 C3 C 0 1 N N N -34.010 -3.183 15.296 -7.545 1.674 0.368 C3 Q9W 4 Q9W C4 C4 C 0 1 N N R -33.329 0.179 15.009 -4.483 -0.150 -0.406 C4 Q9W 5 Q9W C5 C5 C 0 1 Y N N -31.868 -0.139 12.961 -2.643 1.402 0.350 C5 Q9W 6 Q9W C6 C6 C 0 1 Y N N -30.492 1.467 13.151 -0.868 0.244 -0.113 C6 Q9W 7 Q9W N N1 N 0 1 Y N N -32.247 0.529 14.095 -3.085 0.231 -0.190 N Q9W 8 Q9W C C7 C 0 1 N N S -35.352 -1.003 15.331 -6.464 -0.529 0.960 C Q9W 9 Q9W C10 C8 C 0 1 N N N -28.355 1.469 11.067 2.873 -0.167 -0.177 C10 Q9W 10 Q9W C11 C9 C 0 1 N N N -28.932 1.964 9.755 3.944 0.816 0.299 C11 Q9W 11 Q9W C12 C10 C 0 1 N N N -28.839 0.931 8.640 5.330 0.209 0.071 C12 Q9W 12 Q9W C13 C11 C 0 1 N N N -29.590 1.313 7.363 6.401 1.193 0.547 C13 Q9W 13 Q9W C14 C12 C 0 1 Y N N -31.095 1.317 7.493 7.766 0.595 0.323 C14 Q9W 14 Q9W C15 C13 C 0 1 Y N N -31.875 2.141 6.691 8.355 -0.173 1.310 C15 Q9W 15 Q9W C16 C14 C 0 1 Y N N -33.255 2.144 6.811 9.608 -0.721 1.104 C16 Q9W 16 Q9W C17 C15 C 0 1 Y N N -33.874 1.326 7.732 10.271 -0.501 -0.088 C17 Q9W 17 Q9W C18 C16 C 0 1 Y N N -33.112 0.503 8.533 9.682 0.267 -1.076 C18 Q9W 18 Q9W C19 C17 C 0 1 Y N N -31.732 0.496 8.415 8.428 0.811 -0.872 C19 Q9W 19 Q9W C7 C18 C 0 1 Y N N -31.368 1.578 14.218 -1.981 -0.525 -0.494 C7 Q9W 20 Q9W C8 C19 C 0 1 Y N N -30.356 3.386 14.978 -0.565 -2.196 -1.190 C8 Q9W 21 Q9W C9 C20 C 0 1 Y N N -29.467 2.443 13.073 0.412 -0.297 -0.314 C9 Q9W 22 Q9W N1 N2 N 0 1 Y N N -30.825 0.376 12.357 -1.342 1.410 0.390 N1 Q9W 23 Q9W N2 N3 N 0 1 Y N N -31.354 2.520 15.166 -1.784 -1.728 -1.023 N2 Q9W 24 Q9W N3 N4 N 0 1 Y N N -29.432 3.404 14.014 0.510 -1.511 -0.847 N3 Q9W 25 Q9W N4 N5 N 0 1 N N N -28.503 2.449 12.131 1.545 0.413 0.041 N4 Q9W 26 Q9W O1 O2 O 0 1 N N N -35.365 1.157 14.156 -4.950 -2.385 0.469 O1 Q9W 27 Q9W O2 O3 O 0 1 N N N -32.921 -3.870 15.896 -7.777 2.607 -0.690 O2 Q9W 28 Q9W O3 O4 O 0 1 N N N -32.991 -1.028 15.666 -5.327 1.022 -0.424 O3 Q9W 29 Q9W H1 H1 H 0 1 N N N -36.438 -0.920 16.956 -8.295 -1.389 0.862 H1 Q9W 30 Q9W H2 H2 H 0 1 N N N -34.517 -0.592 13.367 -4.421 -0.780 1.681 H2 Q9W 31 Q9W H3 H3 H 0 1 N N N -34.340 -1.923 16.984 -7.094 0.086 -1.033 H3 Q9W 32 Q9W H4 H4 H 0 1 N N N -33.819 -3.079 14.218 -8.497 1.268 0.709 H4 Q9W 33 Q9W H5 H5 H 0 1 N N N -34.931 -3.764 15.451 -7.048 2.180 1.196 H5 Q9W 34 Q9W H6 H6 H 0 1 N N N -33.459 0.985 15.746 -4.586 -0.706 -1.338 H6 Q9W 35 Q9W H7 H7 H 0 1 N N N -32.384 -1.015 12.596 -3.278 2.206 0.690 H7 Q9W 36 Q9W H8 H8 H 0 1 N N N -36.037 -1.678 14.797 -6.608 -0.089 1.947 H8 Q9W 37 Q9W H9 H9 H 0 1 N N N -28.877 0.546 11.359 3.011 -0.370 -1.239 H9 Q9W 38 Q9W H10 H10 H 0 1 N N N -27.285 1.256 10.927 2.959 -1.098 0.384 H10 Q9W 39 Q9W H11 H11 H 0 1 N N N -28.380 2.864 9.446 3.858 1.746 -0.262 H11 Q9W 40 Q9W H12 H12 H 0 1 N N N -29.991 2.218 9.911 3.806 1.018 1.361 H12 Q9W 41 Q9W H13 H13 H 0 1 N N N -29.254 -0.017 9.013 5.416 -0.721 0.632 H13 Q9W 42 Q9W H14 H14 H 0 1 N N N -27.778 0.792 8.387 5.468 0.007 -0.991 H14 Q9W 43 Q9W H15 H15 H 0 1 N N N -29.316 0.595 6.576 6.315 2.123 -0.014 H15 Q9W 44 Q9W H16 H16 H 0 1 N N N -29.269 2.322 7.066 6.263 1.395 1.609 H16 Q9W 45 Q9W H17 H17 H 0 1 N N N -31.400 2.786 5.966 7.837 -0.345 2.241 H17 Q9W 46 Q9W H18 H18 H 0 1 N N N -33.848 2.790 6.181 10.068 -1.321 1.875 H18 Q9W 47 Q9W H19 H19 H 0 1 N N N -34.950 1.330 7.825 11.250 -0.928 -0.249 H19 Q9W 48 Q9W H20 H20 H 0 1 N N N -33.593 -0.139 9.256 10.201 0.439 -2.007 H20 Q9W 49 Q9W H21 H21 H 0 1 N N N -31.145 -0.155 9.046 7.966 1.408 -1.644 H21 Q9W 50 Q9W H22 H22 H 0 1 N N N -30.286 4.181 15.705 -0.440 -3.178 -1.622 H22 Q9W 51 Q9W H23 H23 H 0 1 N N N -27.640 2.423 12.636 1.461 1.296 0.434 H23 Q9W 52 Q9W H24 H24 H 0 1 N N N -36.198 0.994 13.729 -5.264 -2.959 1.181 H24 Q9W 53 Q9W H25 H25 H 0 1 N N N -32.831 -4.729 15.500 -8.334 3.357 -0.438 H25 Q9W 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Q9W C15 C16 DOUB Y N 1 Q9W C15 C14 SING Y N 2 Q9W C16 C17 SING Y N 3 Q9W C13 C14 SING N N 4 Q9W C13 C12 SING N N 5 Q9W C14 C19 DOUB Y N 6 Q9W C17 C18 DOUB Y N 7 Q9W C19 C18 SING Y N 8 Q9W C12 C11 SING N N 9 Q9W C11 C10 SING N N 10 Q9W C10 N4 SING N N 11 Q9W N4 C9 SING N N 12 Q9W N1 C5 DOUB Y N 13 Q9W N1 C6 SING Y N 14 Q9W C5 N SING Y N 15 Q9W C9 C6 DOUB Y N 16 Q9W C9 N3 SING Y N 17 Q9W C6 C7 SING Y N 18 Q9W N3 C8 DOUB Y N 19 Q9W N C7 SING Y N 20 Q9W N C4 SING N N 21 Q9W O1 C1 SING N N 22 Q9W C7 N2 DOUB Y N 23 Q9W C1 C4 SING N N 24 Q9W C1 C SING N N 25 Q9W C8 N2 SING Y N 26 Q9W C4 O3 SING N N 27 Q9W C3 O2 SING N N 28 Q9W C3 C2 SING N N 29 Q9W C C2 SING N N 30 Q9W C O SING N N 31 Q9W O3 C2 SING N N 32 Q9W O H1 SING N N 33 Q9W C1 H2 SING N N 34 Q9W C2 H3 SING N N 35 Q9W C3 H4 SING N N 36 Q9W C3 H5 SING N N 37 Q9W C4 H6 SING N N 38 Q9W C5 H7 SING N N 39 Q9W C H8 SING N N 40 Q9W C10 H9 SING N N 41 Q9W C10 H10 SING N N 42 Q9W C11 H11 SING N N 43 Q9W C11 H12 SING N N 44 Q9W C12 H13 SING N N 45 Q9W C12 H14 SING N N 46 Q9W C13 H15 SING N N 47 Q9W C13 H16 SING N N 48 Q9W C15 H17 SING N N 49 Q9W C16 H18 SING N N 50 Q9W C17 H19 SING N N 51 Q9W C18 H20 SING N N 52 Q9W C19 H21 SING N N 53 Q9W C8 H22 SING N N 54 Q9W N4 H23 SING N N 55 Q9W O1 H24 SING N N 56 Q9W O2 H25 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Q9W SMILES ACDLabs 12.01 "OCC1OC(n2cnc3c(NCCCCc4ccccc4)ncnc32)C(O)C1O" Q9W InChI InChI 1.03 "InChI=1S/C20H25N5O4/c26-10-14-16(27)17(28)20(29-14)25-12-24-15-18(22-11-23-19(15)25)21-9-5-4-8-13-6-2-1-3-7-13/h1-3,6-7,11-12,14,16-17,20,26-28H,4-5,8-10H2,(H,21,22,23)/t14-,16-,17-,20-/m1/s1" Q9W InChIKey InChI 1.03 QNQVVNSRYWTXJV-WVSUBDOOSA-N Q9W SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(NCCCCc4ccccc4)ncnc23" Q9W SMILES CACTVS 3.385 "OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(NCCCCc4ccccc4)ncnc23" Q9W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCCCNc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]([C@H](O4)CO)O)O" Q9W SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CCCCNc2c3c(ncn2)n(cn3)C4C(C(C(O4)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Q9W "SYSTEMATIC NAME" ACDLabs 12.01 "N-(4-phenylbutyl)adenosine" Q9W "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-5-[6-(4-phenylbutylamino)purin-9-yl]oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Q9W "Create component" 2022-06-03 RCSB Q9W "Initial release" 2023-01-11 RCSB #