data_QBI # _chem_comp.id QBI _chem_comp.name "~{N}-[3-(4-azanyl-2-oxidanylidene-1~{H}-pyrimidin-5-yl)prop-2-ynyl]cyclopentanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N-(3-(4-amino-2-oxo-1,2-dihydropyrimidin-5-yl)prop-2-yn-1-yl)cyclopentanesulfonamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-29 _chem_comp.pdbx_modified_date 2024-09-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 296.345 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QBI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8QCO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QBI C10 C1 C 0 1 N N N N N N 0.950 -4.763 22.016 0.642 -0.226 -0.171 C10 QBI 1 QBI N12 N1 N 0 1 N N N N N N 2.793 -4.214 20.636 -1.457 0.907 0.084 N12 QBI 2 QBI C17 C2 C 0 1 N N N N N N 2.391 -1.366 22.216 -5.468 -0.005 0.329 C17 QBI 3 QBI C20 C3 C 0 1 N N N N N N 1.435 -0.422 20.240 -3.525 -1.480 0.285 C20 QBI 4 QBI C02 C4 C 0 1 N N N N N N -2.033 -3.920 23.671 4.115 -1.115 -0.276 C02 QBI 5 QBI C04 C5 C 0 1 N N N N N N -2.537 -2.950 25.672 5.932 0.215 0.241 C04 QBI 6 QBI C07 C6 C 0 1 N N N N N N -0.314 -3.327 25.167 3.797 1.185 0.448 C07 QBI 7 QBI C08 C7 C 0 1 N N N N N N -0.704 -3.851 23.955 3.228 0.009 0.039 C08 QBI 8 QBI C09 C8 C 0 1 N N N N N N 0.274 -4.378 22.911 1.807 -0.120 -0.076 C09 QBI 9 QBI C11 C9 C 0 1 N N N N N N 1.681 -5.129 20.733 -0.820 -0.358 -0.291 C11 QBI 10 QBI C16 C10 C 0 1 N N N N N N 1.593 -1.630 20.880 -3.959 -0.052 0.676 C16 QBI 11 QBI C18 C11 C 0 1 N N N N N N 2.708 0.204 22.198 -5.955 -1.420 0.729 C18 QBI 12 QBI C19 C12 C 0 1 N N N N N N 1.814 0.758 21.332 -4.794 -2.350 0.318 C19 QBI 13 QBI N01 N2 N 0 1 N N N N N N -2.457 -4.490 22.399 3.597 -2.318 -0.691 N01 QBI 14 QBI N03 N3 N 0 1 N N N N N N -2.916 -3.440 24.497 5.425 -0.949 -0.160 N03 QBI 15 QBI N06 N4 N 0 1 N N N N N N -1.255 -2.887 25.989 5.151 1.266 0.544 N06 QBI 16 QBI O05 O1 O 0 1 N N N N N N -3.348 -2.539 26.430 7.142 0.332 0.336 O05 QBI 17 QBI O14 O2 O 0 1 N N N N N N 1.923 -3.015 18.575 -3.303 2.488 0.190 O14 QBI 18 QBI O15 O3 O 0 1 N N N N N N 3.892 -2.182 19.532 -3.131 0.881 -1.683 O15 QBI 19 QBI S13 S1 S 0 1 N N N N N N 2.593 -2.738 19.846 -3.046 1.178 -0.296 S13 QBI 20 QBI H121 H1 H 0 0 N N N N N N 3.080 -4.006 21.571 -0.949 1.584 0.557 H121 QBI 21 QBI H171 H2 H 0 0 N N N N N N 1.779 -1.628 23.092 -5.976 0.759 0.918 H171 QBI 22 QBI H172 H3 H 0 0 N N N N N N 3.323 -1.950 22.233 -5.614 0.170 -0.737 H172 QBI 23 QBI H201 H4 H 0 0 N N N N N N 0.394 -0.306 19.905 -3.100 -1.479 -0.719 H201 QBI 24 QBI H202 H5 H 0 0 N N N N N N 2.108 -0.364 19.372 -2.794 -1.858 0.999 H202 QBI 25 QBI H071 H6 H 0 0 N N N N N N 0.730 -3.276 25.440 3.179 2.036 0.694 H071 QBI 26 QBI H112 H7 H 0 0 N N N N N N 2.043 -6.167 20.781 -1.079 -0.605 -1.320 H112 QBI 27 QBI H111 H8 H 0 0 N N N N N N 1.014 -5.013 19.866 -1.168 -1.150 0.372 H111 QBI 28 QBI H161 H9 H 0 0 N N N N N N 0.643 -2.141 21.095 -3.807 0.116 1.742 H161 QBI 29 QBI H181 H10 H 0 0 N N N N N N 2.581 0.631 23.204 -6.125 -1.475 1.804 H181 QBI 30 QBI H182 H11 H 0 0 N N N N N N 3.737 0.382 21.851 -6.863 -1.679 0.186 H182 QBI 31 QBI H191 H12 H 0 0 N N N N N N 0.912 1.082 21.871 -4.984 -2.771 -0.669 H191 QBI 32 QBI H192 H13 H 0 0 N N N N N N 2.264 1.621 20.820 -4.679 -3.149 1.050 H192 QBI 33 QBI H011 H14 H 0 0 N N N N N N -3.428 -4.513 22.160 2.637 -2.429 -0.777 H011 QBI 34 QBI H012 H15 H 0 0 N N N N N N -1.777 -4.859 21.765 4.191 -3.056 -0.898 H012 QBI 35 QBI H061 H16 H 0 0 N N N N N N -0.989 -2.498 26.871 5.561 2.095 0.836 H061 QBI 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QBI C02 N01 SING N N 1 QBI N03 C02 DOUB N N 2 QBI C04 N03 SING N N 3 QBI O05 C04 DOUB N N 4 QBI N06 C04 SING N N 5 QBI C07 N06 SING N N 6 QBI C08 C07 DOUB N N 7 QBI C09 C08 SING N N 8 QBI C10 C09 TRIP N N 9 QBI C11 C10 SING N N 10 QBI N12 C11 SING N N 11 QBI S13 N12 SING N N 12 QBI O14 S13 DOUB N N 13 QBI O15 S13 DOUB N N 14 QBI C16 S13 SING N N 15 QBI C17 C16 SING N N 16 QBI C18 C17 SING N N 17 QBI C19 C18 SING N N 18 QBI C20 C19 SING N N 19 QBI C02 C08 SING N N 20 QBI C16 C20 SING N N 21 QBI N12 H121 SING N N 22 QBI C17 H171 SING N N 23 QBI C17 H172 SING N N 24 QBI C20 H201 SING N N 25 QBI C20 H202 SING N N 26 QBI C07 H071 SING N N 27 QBI C11 H112 SING N N 28 QBI C11 H111 SING N N 29 QBI C16 H161 SING N N 30 QBI C18 H181 SING N N 31 QBI C18 H182 SING N N 32 QBI C19 H191 SING N N 33 QBI C19 H192 SING N N 34 QBI N01 H011 SING N N 35 QBI N01 H012 SING N N 36 QBI N06 H061 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QBI InChI InChI 1.06 "InChI=1S/C12H16N4O3S/c13-11-9(8-14-12(17)16-11)4-3-7-15-20(18,19)10-5-1-2-6-10/h8,10,15H,1-2,5-7H2,(H3,13,14,16,17)" QBI InChIKey InChI 1.06 NLRKPGXUNFPAJK-UHFFFAOYSA-N QBI SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=O)NC=C1C#CCN[S](=O)(=O)C2CCCC2" QBI SMILES CACTVS 3.385 "NC1=NC(=O)NC=C1C#CCN[S](=O)(=O)C2CCCC2" QBI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CCC(C1)S(=O)(=O)NCC#CC2=CNC(=O)N=C2N" QBI SMILES "OpenEye OEToolkits" 2.0.7 "C1CCC(C1)S(=O)(=O)NCC#CC2=CNC(=O)N=C2N" # _pdbx_chem_comp_identifier.comp_id QBI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3-(4-azanyl-2-oxidanylidene-1~{H}-pyrimidin-5-yl)prop-2-ynyl]cyclopentanesulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QBI "Create component" 2023-08-29 PDBE QBI "Initial release" 2024-09-11 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id QBI _pdbx_chem_comp_synonyms.name "N-(3-(4-amino-2-oxo-1,2-dihydropyrimidin-5-yl)prop-2-yn-1-yl)cyclopentanesulfonamide" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #