data_QBO # _chem_comp.id QBO _chem_comp.name "(4~{R})-4-[(1~{R},2~{S},5~{R},6~{R},13~{S},14~{S},17~{R},19~{R})-6,14-dimethyl-17-oxidanyl-7,8,9,10-tetrazapentacyclo[11.8.0.0^{2,6}.0^{7,11}.0^{14,19}]henicosa-8,10-dien-5-yl]pentanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H38 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-24 _chem_comp.pdbx_modified_date 2023-05-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 430.584 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QBO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BBS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QBO OBB O1 O 0 1 N N N -9.493 31.444 -12.236 -7.066 -0.914 1.238 OBB QBO 1 QBO CBE C1 C 0 1 N N N -10.014 32.272 -11.446 -7.062 -0.652 0.059 CBE QBO 2 QBO OBD O2 O 0 1 N N N -10.085 33.521 -11.497 -8.203 -0.713 -0.646 OBD QBO 3 QBO CAY C2 C 0 1 N N N -10.660 31.755 -10.169 -5.778 -0.251 -0.620 CAY QBO 4 QBO CAL C3 C 0 1 N N N -12.181 31.538 -10.362 -4.639 -0.255 0.401 CAL QBO 5 QBO CAH C4 C 0 1 N N R -12.778 31.045 -8.957 -3.335 0.152 -0.288 CAH QBO 6 QBO CAI C5 C 0 1 N N N -13.126 32.261 -8.139 -3.442 1.600 -0.769 CAI QBO 7 QBO CAM C6 C 0 1 N N R -14.131 30.211 -8.961 -2.175 0.028 0.702 CAM QBO 8 QBO CAE C7 C 0 1 N N N -15.103 30.769 -10.008 -2.129 -1.396 1.288 CAE QBO 9 QBO CAF C8 C 0 1 N N N -15.842 29.572 -10.571 -0.749 -1.985 0.933 CAF QBO 10 QBO CAN C9 C 0 1 N N S -15.580 28.398 -9.551 0.125 -0.769 0.586 CAN QBO 11 QBO CAU C10 C 0 1 N N R -14.077 28.688 -9.183 -0.838 0.243 -0.022 CAU QBO 12 QBO CAS C11 C 0 1 N N N -12.987 28.255 -10.200 -1.007 -0.031 -1.518 CAS QBO 13 QBO NBC N1 N 0 1 Y N N -13.733 28.070 -7.890 -0.319 1.591 0.191 NBC QBO 14 QBO NAT N2 N 0 1 Y N N -13.217 28.737 -6.849 -0.794 2.568 0.866 NAT QBO 15 QBO NAO N3 N 0 1 Y N N -13.035 27.780 -5.896 0.020 3.566 0.768 NAO QBO 16 QBO NAW N4 N 0 1 Y N N -13.522 26.634 -6.377 1.023 3.232 0.025 NAW QBO 17 QBO CAZ C12 C 0 1 Y N N -13.956 26.796 -7.612 0.843 1.998 -0.356 CAZ QBO 18 QBO CAV C13 C 0 1 N N N -14.471 25.715 -8.371 1.721 1.146 -1.232 CAV QBO 19 QBO CAG C14 C 0 1 N N S -15.913 25.952 -8.979 2.321 -0.006 -0.400 CAG QBO 20 QBO CAA C15 C 0 1 N N R -15.919 27.036 -10.109 1.305 -1.140 -0.278 CAA QBO 21 QBO CAC C16 C 0 1 N N N -17.354 27.190 -10.765 1.961 -2.379 0.347 CAC QBO 22 QBO CAD C17 C 0 1 N N N -17.837 25.933 -11.328 3.170 -2.822 -0.470 CAD QBO 23 QBO CAB C18 C 0 1 N N R -17.891 24.860 -10.236 4.196 -1.686 -0.479 CAB QBO 24 QBO CAR C19 C 0 1 N N N -19.028 25.210 -9.248 4.581 -1.325 0.957 CAR QBO 25 QBO CAX C20 C 0 1 N N R -19.058 24.028 -8.236 5.593 -0.178 0.937 CAX QBO 26 QBO OBA O3 O 0 1 N N N -20.114 24.309 -7.271 5.949 0.166 2.277 OBA QBO 27 QBO CAQ C21 C 0 1 N N N -17.810 23.881 -7.475 4.976 1.039 0.245 CAQ QBO 28 QBO CAJ C22 C 0 1 N N N -16.678 23.499 -8.440 4.589 0.672 -1.189 CAJ QBO 29 QBO CAP C23 C 0 1 N N S -16.508 24.622 -9.540 3.569 -0.472 -1.161 CAP QBO 30 QBO CAK C24 C 0 1 N N N -15.573 24.034 -10.618 3.184 -0.838 -2.595 CAK QBO 31 QBO H1 H1 H 0 1 N N N -9.656 33.831 -12.286 -9.002 -0.971 -0.167 H1 QBO 32 QBO H2 H2 H 0 1 N N N -10.193 30.798 -9.892 -5.552 -0.959 -1.418 H2 QBO 33 QBO H3 H3 H 0 1 N N N -10.501 32.487 -9.364 -5.885 0.748 -1.041 H3 QBO 34 QBO H4 H4 H 0 1 N N N -12.660 32.481 -10.664 -4.864 0.452 1.199 H4 QBO 35 QBO H5 H5 H 0 1 N N N -12.357 30.774 -11.134 -4.531 -1.255 0.822 H5 QBO 36 QBO H6 H6 H 0 1 N N N -12.006 30.458 -8.438 -3.155 -0.502 -1.141 H6 QBO 37 QBO H7 H7 H 0 1 N N N -13.538 31.945 -7.169 -4.189 1.666 -1.560 H7 QBO 38 QBO H8 H8 H 0 1 N N N -12.220 32.863 -7.974 -3.738 2.239 0.064 H8 QBO 39 QBO H9 H9 H 0 1 N N N -13.874 32.863 -8.677 -2.476 1.928 -1.153 H9 QBO 40 QBO H10 H10 H 0 1 N N N -14.595 30.372 -7.977 -2.287 0.759 1.503 H10 QBO 41 QBO H11 H11 H 0 1 N N N -14.550 31.287 -10.806 -2.249 -1.356 2.371 H11 QBO 42 QBO H12 H12 H 0 1 N N N -15.810 31.469 -9.539 -2.920 -2.004 0.849 H12 QBO 43 QBO H13 H13 H 0 1 N N N -16.919 29.785 -10.644 -0.334 -2.519 1.788 H13 QBO 44 QBO H14 H14 H 0 1 N N N -15.451 29.312 -11.566 -0.831 -2.651 0.073 H14 QBO 45 QBO H15 H15 H 0 1 N N N -16.193 28.580 -8.656 0.512 -0.353 1.516 H15 QBO 46 QBO H16 H16 H 0 1 N N N -11.994 28.521 -9.809 -1.640 -0.908 -1.657 H16 QBO 47 QBO H17 H17 H 0 1 N N N -13.041 27.167 -10.354 -1.472 0.831 -1.995 H17 QBO 48 QBO H18 H18 H 0 1 N N N -13.154 28.770 -11.158 -0.031 -0.212 -1.967 H18 QBO 49 QBO H19 H19 H 0 1 N N N -14.517 24.831 -7.718 1.128 0.734 -2.049 H19 QBO 50 QBO H20 H20 H 0 1 N N N -13.778 25.521 -9.203 2.526 1.756 -1.641 H20 QBO 51 QBO H21 H21 H 0 1 N N N -16.567 26.303 -8.167 2.602 0.358 0.588 H21 QBO 52 QBO H22 H22 H 0 1 N N N -15.195 26.755 -10.888 0.947 -1.403 -1.273 H22 QBO 53 QBO H23 H23 H 0 1 N N N -17.299 27.940 -11.568 2.280 -2.143 1.362 H23 QBO 54 QBO H24 H24 H 0 1 N N N -18.062 27.529 -9.994 1.234 -3.191 0.379 H24 QBO 55 QBO H25 H25 H 0 1 N N N -18.845 26.082 -11.743 3.612 -3.710 -0.017 H25 QBO 56 QBO H26 H26 H 0 1 N N N -17.156 25.606 -12.128 2.861 -3.045 -1.491 H26 QBO 57 QBO H27 H27 H 0 1 N N N -18.168 23.914 -10.724 5.082 -1.998 -1.033 H27 QBO 58 QBO H28 H28 H 0 1 N N N -18.813 26.157 -8.731 3.691 -1.016 1.505 H28 QBO 59 QBO H29 H29 H 0 1 N N N -19.989 25.291 -9.777 5.025 -2.194 1.444 H29 QBO 60 QBO H30 H30 H 0 1 N N N -19.279 23.098 -8.781 6.485 -0.490 0.394 H30 QBO 61 QBO H31 H31 H 0 1 N N N -20.159 23.604 -6.636 6.589 0.888 2.341 H31 QBO 62 QBO H32 H32 H 0 1 N N N -17.931 23.093 -6.717 4.087 1.355 0.791 H32 QBO 63 QBO H33 H33 H 0 1 N N N -17.566 24.832 -6.979 5.700 1.854 0.229 H33 QBO 64 QBO H34 H34 H 0 1 N N N -16.921 22.544 -8.928 4.149 1.540 -1.681 H34 QBO 65 QBO H35 H35 H 0 1 N N N -15.739 23.394 -7.877 5.477 0.355 -1.736 H35 QBO 66 QBO H36 H36 H 0 1 N N N -14.581 23.846 -10.181 2.467 -1.659 -2.581 H36 QBO 67 QBO H37 H37 H 0 1 N N N -15.994 23.089 -10.992 2.735 0.027 -3.083 H37 QBO 68 QBO H38 H38 H 0 1 N N N -15.478 24.748 -11.450 4.075 -1.144 -3.144 H38 QBO 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QBO OBB CBE DOUB N N 1 QBO OBD CBE SING N N 2 QBO CBE CAY SING N N 3 QBO CAD CAC SING N N 4 QBO CAD CAB SING N N 5 QBO CAC CAA SING N N 6 QBO CAK CAP SING N N 7 QBO CAF CAE SING N N 8 QBO CAF CAN SING N N 9 QBO CAL CAY SING N N 10 QBO CAL CAH SING N N 11 QBO CAB CAP SING N N 12 QBO CAB CAR SING N N 13 QBO CAS CAU SING N N 14 QBO CAA CAN SING N N 15 QBO CAA CAG SING N N 16 QBO CAE CAM SING N N 17 QBO CAN CAU SING N N 18 QBO CAP CAG SING N N 19 QBO CAP CAJ SING N N 20 QBO CAR CAX SING N N 21 QBO CAU CAM SING N N 22 QBO CAU NBC SING N N 23 QBO CAG CAV SING N N 24 QBO CAM CAH SING N N 25 QBO CAH CAI SING N N 26 QBO CAJ CAQ SING N N 27 QBO CAV CAZ SING N N 28 QBO CAX CAQ SING N N 29 QBO CAX OBA SING N N 30 QBO NBC CAZ SING Y N 31 QBO NBC NAT SING Y N 32 QBO CAZ NAW DOUB Y N 33 QBO NAT NAO DOUB Y N 34 QBO NAW NAO SING Y N 35 QBO OBD H1 SING N N 36 QBO CAY H2 SING N N 37 QBO CAY H3 SING N N 38 QBO CAL H4 SING N N 39 QBO CAL H5 SING N N 40 QBO CAH H6 SING N N 41 QBO CAI H7 SING N N 42 QBO CAI H8 SING N N 43 QBO CAI H9 SING N N 44 QBO CAM H10 SING N N 45 QBO CAE H11 SING N N 46 QBO CAE H12 SING N N 47 QBO CAF H13 SING N N 48 QBO CAF H14 SING N N 49 QBO CAN H15 SING N N 50 QBO CAS H16 SING N N 51 QBO CAS H17 SING N N 52 QBO CAS H18 SING N N 53 QBO CAV H19 SING N N 54 QBO CAV H20 SING N N 55 QBO CAG H21 SING N N 56 QBO CAA H22 SING N N 57 QBO CAC H23 SING N N 58 QBO CAC H24 SING N N 59 QBO CAD H25 SING N N 60 QBO CAD H26 SING N N 61 QBO CAB H27 SING N N 62 QBO CAR H28 SING N N 63 QBO CAR H29 SING N N 64 QBO CAX H30 SING N N 65 QBO OBA H31 SING N N 66 QBO CAQ H32 SING N N 67 QBO CAQ H33 SING N N 68 QBO CAJ H34 SING N N 69 QBO CAJ H35 SING N N 70 QBO CAK H36 SING N N 71 QBO CAK H37 SING N N 72 QBO CAK H38 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QBO InChI InChI 1.06 "InChI=1S/C24H38N4O3/c1-14(4-9-22(30)31)18-7-8-19-17-6-5-15-12-16(29)10-11-23(15,2)20(17)13-21-25-26-27-28(21)24(18,19)3/h14-20,29H,4-13H2,1-3H3,(H,30,31)/t14-,15-,16-,17+,18-,19+,20+,23+,24-/m1/s1" QBO InChIKey InChI 1.06 MIQKAEOABWRKCI-VPUMZWJWSA-N QBO SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3Cc5nnnn5[C@]12C" QBO SMILES CACTVS 3.385 "C[CH](CCC(O)=O)[CH]1CC[CH]2[CH]3CC[CH]4C[CH](O)CC[C]4(C)[CH]3Cc5nnnn5[C]12C" QBO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CCC(=O)O)[C@H]1CC[C@@H]2[C@@]1(n3c(nnn3)C[C@H]4[C@H]2CC[C@H]5[C@@]4(CC[C@H](C5)O)C)C" QBO SMILES "OpenEye OEToolkits" 2.0.7 "CC(CCC(=O)O)C1CCC2C1(n3c(nnn3)CC4C2CCC5C4(CCC(C5)O)C)C" # _pdbx_chem_comp_identifier.comp_id QBO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(4~{R})-4-[(1~{R},2~{S},5~{R},6~{R},13~{S},14~{S},17~{R},19~{R})-6,14-dimethyl-17-oxidanyl-7,8,9,10-tetrazapentacyclo[11.8.0.0^{2,6}.0^{7,11}.0^{14,19}]henicosa-8,10-dien-5-yl]pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QBO "Create component" 2022-10-24 PDBE QBO "Initial release" 2023-03-08 RCSB QBO "Modify formula" 2023-05-15 PDBE #