data_QG2 # _chem_comp.id QG2 _chem_comp.name "(2~{S},3~{S},4~{R},5~{R},6~{S})-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-4,5-bis(oxidanyl)-3-(sulfoamino)-6-(sulfooxymethyl)oxan-2-yl]oxy-6-(4-methyl-2-oxidanylidene-chromen-7-yl)oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H27 N O19 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-06-16 _chem_comp.pdbx_modified_date 2020-10-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 673.575 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QG2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ZDM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QG2 C1 C1 C 0 1 N N S -20.071 15.326 57.394 -2.030 1.342 0.879 C1 QG2 1 QG2 C2 C2 C 0 1 N N R -19.401 15.609 56.039 -0.956 1.597 1.939 C2 QG2 2 QG2 C3 C3 C 0 1 N N R -18.560 16.902 56.035 0.383 1.861 1.243 C3 QG2 3 QG2 C4 C4 C 0 1 N N S -19.217 17.916 56.960 0.724 0.668 0.346 C4 QG2 4 QG2 C5 C5 C 0 1 N N S -19.076 17.366 58.403 -0.415 0.448 -0.652 C5 QG2 5 QG2 C6 C6 C 0 1 N N N -19.861 18.220 59.351 -0.115 -0.762 -1.500 C6 QG2 6 QG2 O7 O1 O 0 1 N N N -18.581 14.484 55.663 -1.320 2.735 2.723 O7 QG2 7 QG2 O8 O2 O 0 1 N N N -18.353 17.420 54.718 1.408 2.029 2.226 O8 QG2 8 QG2 O9 O3 O 0 1 N N N -18.576 19.204 56.885 1.936 0.934 -0.364 O9 QG2 9 QG2 O10 O4 O 0 1 N N N -19.433 15.972 58.533 -1.637 0.239 0.060 O10 QG2 10 QG2 O11 O5 O 0 1 N N N -19.175 19.085 59.974 0.869 -0.714 -2.412 O11 QG2 11 QG2 O12 O6 O 0 1 N N N -21.452 15.750 57.363 -3.271 1.039 1.521 O12 QG2 12 QG2 C13 C7 C 0 1 N N R -18.925 20.126 55.832 3.121 0.644 0.380 C13 QG2 13 QG2 C14 C8 C 0 1 N N R -18.406 21.492 56.260 4.348 1.075 -0.426 C14 QG2 14 QG2 C15 C9 C 0 1 N N R -19.260 22.052 57.387 4.406 0.266 -1.725 C15 QG2 15 QG2 C16 C10 C 0 1 N N S -20.713 22.075 56.988 4.430 -1.227 -1.383 C16 QG2 16 QG2 C17 C11 C 0 1 N N R -21.131 20.677 56.576 3.199 -1.569 -0.539 C17 QG2 17 QG2 C18 C12 C 0 1 N N N -22.580 20.641 56.146 3.246 -3.046 -0.143 C18 QG2 18 QG2 O19 O7 O 0 1 N N N -20.318 20.213 55.509 3.190 -0.760 0.638 O19 QG2 19 QG2 N20 N1 N 0 1 N N N -16.991 21.344 56.695 4.250 2.502 -0.743 N20 QG2 20 QG2 O21 O8 O 0 1 N N N -18.871 23.370 57.686 5.588 0.609 -2.451 O21 QG2 21 QG2 O22 O9 O 0 1 N N N -21.510 22.543 58.091 4.410 -1.994 -2.589 O22 QG2 22 QG2 O23 O10 O 0 1 N N N -23.135 19.334 56.302 2.049 -3.390 0.557 O23 QG2 23 QG2 S24 S1 S 0 1 N N N -16.012 22.604 56.354 4.990 3.619 0.231 S24 QG2 24 QG2 S25 S2 S 0 1 N N N -24.036 18.741 55.207 1.987 -4.845 1.001 S25 QG2 25 QG2 O26 O11 O 0 1 N N N -23.750 17.310 55.007 0.671 -5.060 1.490 O26 QG2 26 QG2 O27 O12 O 0 1 N N N -23.721 19.494 53.985 2.561 -5.610 -0.050 O27 QG2 27 QG2 O28 O13 O 0 1 N N N -25.471 18.843 55.459 2.919 -4.990 2.196 O28 QG2 28 QG2 O29 O14 O 0 1 N N N -16.140 22.823 54.885 4.741 4.889 -0.355 O29 QG2 29 QG2 O30 O15 O 0 1 N N N -14.584 22.367 56.680 4.625 3.293 1.565 O30 QG2 30 QG2 O31 O16 O 0 1 N N N -16.464 23.740 57.154 6.490 3.384 0.126 O31 QG2 31 QG2 C32 C13 C 0 1 Y N N -22.343 15.332 58.296 -4.357 0.887 0.722 C32 QG2 32 QG2 C33 C14 C 0 1 Y N N -23.699 15.583 58.074 -4.224 1.022 -0.659 C33 QG2 33 QG2 C34 C15 C 0 1 Y N N -24.641 15.122 59.000 -5.307 0.872 -1.476 C34 QG2 34 QG2 C35 C16 C 0 1 Y N N -24.240 14.427 60.141 -6.560 0.580 -0.924 C35 QG2 35 QG2 C36 C17 C 0 1 Y N N -22.808 14.174 60.363 -6.700 0.442 0.470 C36 QG2 36 QG2 C37 C18 C 0 1 Y N N -21.893 14.636 59.440 -5.589 0.593 1.285 C37 QG2 37 QG2 C38 C19 C 0 1 N N N -25.173 13.948 61.195 -7.739 0.414 -1.775 C38 QG2 38 QG2 C39 C20 C 0 1 N N N -24.659 13.259 62.301 -8.927 0.132 -1.179 C39 QG2 39 QG2 C40 C21 C 0 1 N N N -23.274 13.026 62.448 -8.995 0.008 0.224 C40 QG2 40 QG2 O41 O17 O 0 1 N N N -22.387 13.483 61.485 -7.911 0.161 0.999 O41 QG2 41 QG2 C42 C22 C 0 1 N N N -26.644 14.198 61.058 -7.638 0.553 -3.273 C42 QG2 42 QG2 O43 O18 O 0 1 N N N -22.798 12.410 63.457 -10.066 -0.245 0.745 O43 QG2 43 QG2 O44 O19 O 0 1 N N N -21.118 18.047 59.439 -0.759 -1.774 -1.359 O44 QG2 44 QG2 H1 H1 H 0 1 N N N -20.043 14.238 57.553 -2.149 2.231 0.259 H1 QG2 45 QG2 H2 H2 H 0 1 N N N -20.200 15.731 55.292 -0.865 0.724 2.584 H2 QG2 46 QG2 H3 H3 H 0 1 N N N -17.580 16.651 56.468 0.308 2.764 0.636 H3 QG2 47 QG2 H4 H4 H 0 1 N N N -20.285 18.001 56.711 0.849 -0.225 0.959 H4 QG2 48 QG2 H5 H5 H 0 1 N N N -18.015 17.469 58.676 -0.513 1.325 -1.292 H5 QG2 49 QG2 HO7 H6 H 0 1 N N N -19.107 13.693 55.668 -2.162 2.638 3.189 HO7 QG2 50 QG2 HO8 H7 H 0 1 N N N -17.832 18.213 54.767 1.253 2.764 2.834 HO8 QG2 51 QG2 H6 H8 H 0 1 N N N -19.746 19.601 60.531 0.976 -1.487 -2.983 H6 QG2 52 QG2 H13 H9 H 0 1 N N N -18.375 19.837 54.924 3.098 1.187 1.326 H13 QG2 53 QG2 H14 H10 H 0 1 N N N -18.454 22.177 55.401 5.251 0.893 0.158 H14 QG2 54 QG2 H15 H11 H 0 1 N N N -19.143 21.409 58.272 3.528 0.488 -2.333 H15 QG2 55 QG2 H16 H12 H 0 1 N N N -20.835 22.749 56.127 5.334 -1.457 -0.820 H16 QG2 56 QG2 H17 H13 H 0 1 N N N -21.012 20.012 57.444 2.296 -1.377 -1.119 H17 QG2 57 QG2 H181 H14 H 0 0 N N N -22.647 20.935 55.088 3.332 -3.660 -1.040 H181 QG2 58 QG2 H18 H15 H 0 1 N N N -23.154 21.350 56.761 4.107 -3.222 0.502 H18 QG2 59 QG2 HN20 H16 H 0 0 N N N -16.986 21.210 57.686 3.752 2.793 -1.522 HN20 QG2 60 QG2 HO21 H17 H 0 0 N N N -19.411 23.708 58.391 5.689 0.132 -3.286 HO21 QG2 61 QG2 HO22 H18 H 0 0 N N N -21.233 23.419 58.333 4.423 -2.950 -2.447 HO22 QG2 62 QG2 H33 H19 H 0 1 N N N -24.017 16.127 57.197 -3.258 1.247 -1.085 H33 QG2 63 QG2 H34 H20 H 0 1 N N N -25.691 15.306 58.829 -5.198 0.978 -2.545 H34 QG2 64 QG2 H37 H21 H 0 1 N N N -20.837 14.466 59.591 -5.683 0.486 2.355 H37 QG2 65 QG2 H39 H22 H 0 1 N N N -25.338 12.897 63.059 -9.816 0.004 -1.778 H39 QG2 66 QG2 H42 H23 H 0 1 N N N -27.171 13.775 61.926 -7.415 -0.419 -3.713 H42 QG2 67 QG2 H421 H24 H 0 0 N N N -26.829 15.281 61.009 -8.585 0.922 -3.668 H421 QG2 68 QG2 H422 H25 H 0 0 N N N -27.013 13.721 60.138 -6.843 1.255 -3.520 H422 QG2 69 QG2 H7 H26 H 0 1 N N N -25.860 17.977 55.432 2.955 -5.885 2.559 H7 QG2 70 QG2 H8 H27 H 0 1 N N N -15.746 24.057 57.689 7.021 3.989 0.662 H8 QG2 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QG2 O27 S25 DOUB N N 1 QG2 O8 C3 SING N N 2 QG2 O29 S24 DOUB N N 3 QG2 O26 S25 DOUB N N 4 QG2 S25 O28 SING N N 5 QG2 S25 O23 SING N N 6 QG2 O19 C13 SING N N 7 QG2 O19 C17 SING N N 8 QG2 O7 C2 SING N N 9 QG2 C13 C14 SING N N 10 QG2 C13 O9 SING N N 11 QG2 C3 C2 SING N N 12 QG2 C3 C4 SING N N 13 QG2 C2 C1 SING N N 14 QG2 C18 O23 SING N N 15 QG2 C18 C17 SING N N 16 QG2 C14 N20 SING N N 17 QG2 C14 C15 SING N N 18 QG2 S24 O30 DOUB N N 19 QG2 S24 N20 SING N N 20 QG2 S24 O31 SING N N 21 QG2 C17 C16 SING N N 22 QG2 O9 C4 SING N N 23 QG2 C4 C5 SING N N 24 QG2 C16 C15 SING N N 25 QG2 C16 O22 SING N N 26 QG2 O12 C1 SING N N 27 QG2 O12 C32 SING N N 28 QG2 C15 O21 SING N N 29 QG2 C1 O10 SING N N 30 QG2 C33 C32 DOUB Y N 31 QG2 C33 C34 SING Y N 32 QG2 C32 C37 SING Y N 33 QG2 C5 O10 SING N N 34 QG2 C5 C6 SING N N 35 QG2 C34 C35 DOUB Y N 36 QG2 C6 O44 DOUB N N 37 QG2 C6 O11 SING N N 38 QG2 C37 C36 DOUB Y N 39 QG2 C35 C36 SING Y N 40 QG2 C35 C38 SING N N 41 QG2 C36 O41 SING N N 42 QG2 C42 C38 SING N N 43 QG2 C38 C39 DOUB N N 44 QG2 O41 C40 SING N N 45 QG2 C39 C40 SING N N 46 QG2 C40 O43 DOUB N N 47 QG2 C1 H1 SING N N 48 QG2 C2 H2 SING N N 49 QG2 C3 H3 SING N N 50 QG2 C4 H4 SING N N 51 QG2 C5 H5 SING N N 52 QG2 O7 HO7 SING N N 53 QG2 O8 HO8 SING N N 54 QG2 O11 H6 SING N N 55 QG2 C13 H13 SING N N 56 QG2 C14 H14 SING N N 57 QG2 C15 H15 SING N N 58 QG2 C16 H16 SING N N 59 QG2 C17 H17 SING N N 60 QG2 C18 H181 SING N N 61 QG2 C18 H18 SING N N 62 QG2 N20 HN20 SING N N 63 QG2 O21 HO21 SING N N 64 QG2 O22 HO22 SING N N 65 QG2 C33 H33 SING N N 66 QG2 C34 H34 SING N N 67 QG2 C37 H37 SING N N 68 QG2 C39 H39 SING N N 69 QG2 C42 H42 SING N N 70 QG2 C42 H421 SING N N 71 QG2 C42 H422 SING N N 72 QG2 O28 H7 SING N N 73 QG2 O31 H8 SING N N 74 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QG2 InChI InChI 1.03 "InChI=1S/C22H27NO19S2/c1-7-4-12(24)39-10-5-8(2-3-9(7)10)38-22-17(28)16(27)18(19(42-22)20(29)30)41-21-13(23-43(31,32)33)15(26)14(25)11(40-21)6-37-44(34,35)36/h2-5,11,13-19,21-23,25-28H,6H2,1H3,(H,29,30)(H,31,32,33)(H,34,35,36)/t11-,13-,14-,15-,16-,17-,18+,19+,21-,22-/m1/s1" QG2 InChIKey InChI 1.03 VWVHHIREMFENNG-XOAMEYKJSA-N QG2 SMILES_CANONICAL CACTVS 3.385 "CC1=CC(=O)Oc2cc(O[C@@H]3O[C@@H]([C@@H](O[C@H]4O[C@H](CO[S](O)(=O)=O)[C@@H](O)[C@H](O)[C@H]4N[S](O)(=O)=O)[C@H](O)[C@H]3O)C(O)=O)ccc12" QG2 SMILES CACTVS 3.385 "CC1=CC(=O)Oc2cc(O[CH]3O[CH]([CH](O[CH]4O[CH](CO[S](O)(=O)=O)[CH](O)[CH](O)[CH]4N[S](O)(=O)=O)[CH](O)[CH]3O)C(O)=O)ccc12" QG2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)Oc2c1ccc(c2)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)C(=O)O)O[C@@H]4[C@@H]([C@H]([C@@H]([C@H](O4)COS(=O)(=O)O)O)O)NS(=O)(=O)O)O)O" QG2 SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)Oc2c1ccc(c2)OC3C(C(C(C(O3)C(=O)O)OC4C(C(C(C(O4)COS(=O)(=O)O)O)O)NS(=O)(=O)O)O)O" # _pdbx_chem_comp_identifier.comp_id QG2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{R},5~{R},6~{S})-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-4,5-bis(oxidanyl)-3-(sulfoamino)-6-(sulfooxymethyl)oxan-2-yl]oxy-6-(4-methyl-2-oxidanylidene-chromen-7-yl)oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QG2 "Create component" 2020-06-16 PDBE QG2 "Initial release" 2020-10-21 RCSB ##