data_QG4 # _chem_comp.id QG4 _chem_comp.name "{N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(triaza-1,2-dien-2-ium-1-ide-kappaN~1~)iron(4+)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H33 Fe N9 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 4 _chem_comp.pdbx_initial_date 2019-10-25 _chem_comp.pdbx_modified_date 2020-05-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 567.488 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QG4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6UIZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QG4 O2 O1 O 0 1 N N N 14.350 29.422 -8.272 9.834 0.711 2.759 O2 QG4 1 QG4 C9 C1 C 0 1 N N N 15.572 29.589 -8.519 9.779 0.599 1.550 C9 QG4 2 QG4 N1 N1 N 0 1 N N N 16.508 29.662 -7.550 10.630 -0.160 0.847 N1 QG4 3 QG4 N2 N2 N 0 1 N N N 16.102 29.254 -9.748 8.859 1.219 0.799 N2 QG4 4 QG4 C10 C2 C 0 1 N N S 17.544 29.257 -9.656 9.076 0.870 -0.613 C10 QG4 5 QG4 C8 C3 C 0 1 N N R 17.865 29.522 -8.150 10.285 -0.072 -0.581 C8 QG4 6 QG4 C7 C4 C 0 1 N N N 18.550 28.237 -7.606 9.947 -1.480 -1.109 C7 QG4 7 QG4 S1 S1 S 0 1 N N N 17.954 26.882 -8.602 8.134 -1.594 -0.824 S1 QG4 8 QG4 C6 C5 C 0 1 N N S 18.154 27.882 -10.070 7.813 0.181 -1.166 C6 QG4 9 QG4 C5 C6 C 0 1 N N N 17.575 27.295 -11.378 6.565 0.656 -0.419 C5 QG4 10 QG4 C4 C7 C 0 1 N N N 18.302 26.081 -11.943 5.320 0.051 -1.071 C4 QG4 11 QG4 C3 C8 C 0 1 N N N 17.629 25.479 -13.192 4.072 0.527 -0.324 C3 QG4 12 QG4 C2 C9 C 0 1 N N N 18.524 24.348 -13.756 2.827 -0.079 -0.975 C2 QG4 13 QG4 C1 C10 C 0 1 N N N 19.805 24.777 -14.545 1.597 0.390 -0.240 C1 QG4 14 QG4 C24 C11 C 0 1 N N N 21.805 24.502 -15.085 -0.818 0.437 0.075 C24 QG4 15 QG4 O1 O2 O 0 1 N N N 19.694 25.893 -15.036 1.706 1.135 0.710 O1 QG4 16 QG4 N6 N3 N 0 1 N N N 20.802 23.967 -14.116 0.377 -0.019 -0.640 N6 QG4 17 QG4 C23 C12 C 0 1 N N N 22.436 25.734 -14.443 -2.064 -0.168 -0.576 C23 QG4 18 QG4 N3 N4 N 1 1 N N N 23.819 26.010 -14.756 -3.262 0.289 0.140 N3 QG4 19 QG4 C11 C13 C 0 1 N N N 24.669 25.123 -13.849 -3.502 1.753 0.157 C11 QG4 20 QG4 C17 C14 C 0 1 N N N 24.010 27.459 -14.802 -3.446 -0.232 1.518 C17 QG4 21 QG4 FE1 FE1 FE 0 0 N N N 25.011 25.320 -16.556 -4.986 -0.231 -0.581 FE1 QG4 22 QG4 N4 N5 N 1 1 Y N N 26.815 25.475 -14.808 -5.884 1.382 -0.119 N4 QG4 23 QG4 C16 C15 C 0 1 Y N N 28.169 25.737 -14.796 -7.154 1.693 -0.112 C16 QG4 24 QG4 C15 C16 C 0 1 Y N N 28.875 25.713 -13.575 -7.579 2.949 0.285 C15 QG4 25 QG4 C14 C17 C 0 1 Y N N 28.229 25.500 -12.340 -6.610 3.861 0.674 C14 QG4 26 QG4 C13 C18 C 0 1 Y N N 26.814 25.279 -12.409 -5.285 3.492 0.644 C13 QG4 27 QG4 C12 C19 C 0 1 Y N N 26.137 25.293 -13.694 -4.936 2.211 0.218 C12 QG4 28 QG4 N5 N6 N 1 1 Y N N 25.778 27.452 -16.500 -5.409 -1.526 0.747 N5 QG4 29 QG4 C18 C20 C 0 1 Y N N 25.089 28.133 -15.559 -4.434 -1.354 1.700 C18 QG4 30 QG4 C22 C21 C 0 1 Y N N 26.817 28.025 -17.207 -6.363 -2.418 0.812 C22 QG4 31 QG4 C21 C22 C 0 1 Y N N 27.196 29.387 -16.985 -6.463 -3.279 1.890 C21 QG4 32 QG4 C20 C23 C 0 1 Y N N 26.465 30.115 -16.006 -5.516 -3.162 2.896 C20 QG4 33 QG4 C19 C24 C 0 1 Y N N 25.394 29.487 -15.273 -4.491 -2.219 2.806 C19 QG4 34 QG4 N7 N7 N 0 1 N N N 23.495 25.372 -18.085 -5.081 -0.795 -2.372 N7 QG4 35 QG4 N8 N8 N 1 1 N N N 22.625 26.257 -18.068 -6.052 -1.175 -2.791 N8 QG4 36 QG4 N9 N9 N 0 1 N N N 21.725 27.104 -18.089 -7.023 -1.555 -3.210 N9 QG4 37 QG4 H1 H1 H 0 1 N N N 16.320 29.791 -6.576 11.357 -0.684 1.219 H1 QG4 38 QG4 H2 H2 H 0 1 N N N 15.573 29.043 -10.570 8.162 1.806 1.133 H2 QG4 39 QG4 H3 H3 H 0 1 N N N 17.981 30.056 -10.273 9.307 1.765 -1.192 H3 QG4 40 QG4 H4 H4 H 0 1 N N N 18.492 30.415 -8.013 11.112 0.355 -1.148 H4 QG4 41 QG4 H5 H5 H 0 1 N N N 18.280 28.080 -6.551 10.177 -1.560 -2.172 H5 QG4 42 QG4 H6 H6 H 0 1 N N N 19.643 28.322 -7.696 10.479 -2.244 -0.542 H6 QG4 43 QG4 H7 H7 H 0 1 N N N 19.239 28.012 -10.199 7.714 0.356 -2.237 H7 QG4 44 QG4 H8 H8 H 0 1 N N N 17.598 28.087 -12.141 6.621 0.339 0.622 H8 QG4 45 QG4 H9 H9 H 0 1 N N N 16.532 27.003 -11.184 6.507 1.744 -0.465 H9 QG4 46 QG4 H10 H10 H 0 1 N N N 18.342 25.306 -11.163 5.264 0.368 -2.112 H10 QG4 47 QG4 H11 H11 H 0 1 N N N 19.325 26.383 -12.212 5.378 -1.036 -1.025 H11 QG4 48 QG4 H12 H12 H 0 1 N N N 17.501 26.262 -13.954 4.128 0.210 0.717 H12 QG4 49 QG4 H13 H13 H 0 1 N N N 16.646 25.069 -12.919 4.014 1.614 -0.370 H13 QG4 50 QG4 H14 H14 H 0 1 N N N 17.905 23.743 -14.434 2.770 0.238 -2.017 H14 QG4 51 QG4 H15 H15 H 0 1 N N N 18.850 23.729 -12.907 2.885 -1.166 -0.929 H15 QG4 52 QG4 H16 H16 H 0 1 N N N 21.309 24.779 -16.027 -0.762 0.120 1.116 H16 QG4 53 QG4 H17 H17 H 0 1 N N N 22.577 23.744 -15.286 -0.877 1.525 0.029 H17 QG4 54 QG4 H18 H18 H 0 1 N N N 20.850 23.264 -13.406 0.289 -0.614 -1.400 H18 QG4 55 QG4 H19 H19 H 0 1 N N N 21.846 26.608 -14.755 -2.120 0.149 -1.618 H19 QG4 56 QG4 H20 H20 H 0 1 N N N 22.362 25.613 -13.352 -2.005 -1.256 -0.530 H20 QG4 57 QG4 H21 H21 H 0 1 N N N 24.244 25.226 -12.840 -2.981 2.168 1.020 H21 QG4 58 QG4 H22 H22 H 0 1 N N N 24.519 24.093 -14.206 -3.052 2.178 -0.739 H22 QG4 59 QG4 H23 H23 H 0 1 N N N 24.139 27.775 -13.756 -2.477 -0.576 1.879 H23 QG4 60 QG4 H24 H24 H 0 1 N N N 23.069 27.870 -15.196 -3.760 0.598 2.151 H24 QG4 61 QG4 H25 H25 H 0 1 N N N 28.687 25.960 -15.717 -7.883 0.959 -0.421 H25 QG4 62 QG4 H26 H26 H 0 1 N N N 29.945 25.863 -13.587 -8.627 3.209 0.291 H26 QG4 63 QG4 H27 H27 H 0 1 N N N 28.765 25.503 -11.403 -6.893 4.852 0.998 H27 QG4 64 QG4 H28 H28 H 0 1 N N N 26.251 25.102 -11.505 -4.529 4.201 0.947 H28 QG4 65 QG4 H29 H29 H 0 1 N N N 27.351 27.436 -17.938 -7.084 -2.484 0.010 H29 QG4 66 QG4 H30 H30 H 0 1 N N N 28.004 29.843 -17.538 -7.251 -4.015 1.947 H30 QG4 67 QG4 H31 H31 H 0 1 N N N 26.714 31.147 -15.810 -5.548 -3.816 3.754 H31 QG4 68 QG4 H32 H32 H 0 1 N N N 24.839 30.034 -14.526 -3.742 -2.141 3.580 H32 QG4 69 QG4 H33 H33 H 0 1 N N N 20.961 26.824 -18.670 -7.238 -2.499 -3.156 H33 QG4 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QG4 N9 N8 DOUB N N 1 QG4 N7 N8 DOUB N N 2 QG4 N7 FE1 SING N N 3 QG4 C22 C21 DOUB Y N 4 QG4 C22 N5 SING Y N 5 QG4 C21 C20 SING Y N 6 QG4 FE1 N5 SING N N 7 QG4 FE1 N3 SING N N 8 QG4 N5 C18 DOUB Y N 9 QG4 C20 C19 DOUB Y N 10 QG4 C18 C19 SING Y N 11 QG4 C18 C17 SING N N 12 QG4 C24 C23 SING N N 13 QG4 C24 N6 SING N N 14 QG4 O1 C1 DOUB N N 15 QG4 N4 C16 DOUB Y N 16 QG4 N4 C12 SING Y N 17 QG4 C17 N3 SING N N 18 QG4 C16 C15 SING Y N 19 QG4 N3 C23 SING N N 20 QG4 N3 C11 SING N N 21 QG4 C1 N6 SING N N 22 QG4 C1 C2 SING N N 23 QG4 C11 C12 SING N N 24 QG4 C2 C3 SING N N 25 QG4 C12 C13 DOUB Y N 26 QG4 C15 C14 DOUB Y N 27 QG4 C3 C4 SING N N 28 QG4 C13 C14 SING Y N 29 QG4 C4 C5 SING N N 30 QG4 C5 C6 SING N N 31 QG4 C6 C10 SING N N 32 QG4 C6 S1 SING N N 33 QG4 N2 C10 SING N N 34 QG4 N2 C9 SING N N 35 QG4 C10 C8 SING N N 36 QG4 S1 C7 SING N N 37 QG4 C9 O2 DOUB N N 38 QG4 C9 N1 SING N N 39 QG4 C8 C7 SING N N 40 QG4 C8 N1 SING N N 41 QG4 N1 H1 SING N N 42 QG4 N2 H2 SING N N 43 QG4 C10 H3 SING N N 44 QG4 C8 H4 SING N N 45 QG4 C7 H5 SING N N 46 QG4 C7 H6 SING N N 47 QG4 C6 H7 SING N N 48 QG4 C5 H8 SING N N 49 QG4 C5 H9 SING N N 50 QG4 C4 H10 SING N N 51 QG4 C4 H11 SING N N 52 QG4 C3 H12 SING N N 53 QG4 C3 H13 SING N N 54 QG4 C2 H14 SING N N 55 QG4 C2 H15 SING N N 56 QG4 C24 H16 SING N N 57 QG4 C24 H17 SING N N 58 QG4 N6 H18 SING N N 59 QG4 C23 H19 SING N N 60 QG4 C23 H20 SING N N 61 QG4 C11 H21 SING N N 62 QG4 C11 H22 SING N N 63 QG4 C17 H23 SING N N 64 QG4 C17 H24 SING N N 65 QG4 C16 H25 SING N N 66 QG4 C15 H26 SING N N 67 QG4 C14 H27 SING N N 68 QG4 C13 H28 SING N N 69 QG4 C22 H29 SING N N 70 QG4 C21 H30 SING N N 71 QG4 C20 H31 SING N N 72 QG4 C19 H32 SING N N 73 QG4 N9 H33 SING N N 74 QG4 FE1 N4 SING N N 75 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QG4 SMILES ACDLabs 12.01 "O=C1NC2C(N1)C(SC2)CCCCC(NCC[N+]43Cc6[n+]([Fe]3([n+]5c(C4)cccc5)\N=[N+]=N)cccc6)=O" QG4 InChI InChI 1.03 "InChI=1S/C24H32N6O2S.Fe.HN3/c31-22(10-2-1-9-21-23-20(17-33-21)28-24(32)29-23)27-13-14-30(15-18-7-3-5-11-25-18)16-19-8-4-6-12-26-19;;1-3-2/h3-8,11-12,20-21,23H,1-2,9-10,13-17H2,(H,27,31)(H2,28,29,32);;1H/q;+4;/t20-,21-,23-;;/m0../s1" QG4 InChIKey InChI 1.03 NPUCPLAKXVBABZ-VPTGAVHVSA-N QG4 SMILES_CANONICAL CACTVS 3.385 "N=[N+]=N[Fe]1[n+]2ccccc2CN(CCNC(=O)CCCC[C@@H]3SC[C@@H]4NC(=O)N[C@H]34)Cc5cccc[n+]15" QG4 SMILES CACTVS 3.385 "N=[N+]=N[Fe]1[n+]2ccccc2CN(CCNC(=O)CCCC[CH]3SC[CH]4NC(=O)N[CH]34)Cc5cccc[n+]15" QG4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc[n+]2c(c1)C[N+]3([Fe]2([n+]4ccccc4C3)N=[N+]=N)CCNC(=O)CCCC[C@H]5[C@@H]6[C@H](CS5)NC(=O)N6" QG4 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc[n+]2c(c1)C[N+]3([Fe]2([n+]4ccccc4C3)N=[N+]=N)CCNC(=O)CCCCC5C6C(CS5)NC(=O)N6" # _pdbx_chem_comp_identifier.comp_id QG4 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "{N-(2-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(triaza-1,2-dien-2-ium-1-ide-kappaN~1~)iron(4+)" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QG4 "Create component" 2019-10-25 RCSB QG4 "Initial release" 2020-05-06 RCSB ##