data_QH0 # _chem_comp.id QH0 _chem_comp.name "(phenylmethyl) N-[(2S)-4-methyl-1-[[(2S)-4-nitro-1-[(3R)-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H32 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-31 _chem_comp.pdbx_modified_date 2024-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QH0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BDH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QH0 C13 C1 C 0 1 N N R N N N 17.242 10.045 26.202 -4.403 1.952 -0.308 C13 QH0 1 QH0 C15 C2 C 0 1 N N N N N N 18.274 8.806 27.917 -6.466 3.077 0.169 C15 QH0 2 QH0 C17 C3 C 0 1 N N N N N N 16.307 9.924 27.379 -4.408 2.524 1.092 C17 QH0 3 QH0 C20 C4 C 0 1 N N N N N N 18.919 11.679 22.060 -2.587 -2.450 1.187 C20 QH0 4 QH0 C26 C5 C 0 1 N N N N N N 20.190 13.384 30.132 4.823 1.029 -0.457 C26 QH0 5 QH0 C28 C6 C 0 1 Y N N N N N 21.401 11.448 28.892 6.809 -0.306 0.279 C28 QH0 6 QH0 O01 O1 O 0 1 N N N N N N 18.699 13.884 28.000 2.501 1.116 -1.675 O01 QH0 7 QH0 C02 C7 C 0 1 N N N N N N 19.796 14.413 27.976 2.508 0.479 -0.641 C02 QH0 8 QH0 N03 N1 N 0 1 N N N N N N 20.249 15.065 26.898 1.379 -0.114 -0.206 N03 QH0 9 QH0 C04 C8 C 0 1 N N S N N N 19.590 14.903 25.613 0.141 0.010 -0.981 C04 QH0 10 QH0 C05 C9 C 0 1 N N N N N N 20.363 15.722 24.535 0.112 -1.064 -2.071 C05 QH0 11 QH0 C06 C10 C 0 1 N N N N N N 20.435 17.206 24.861 1.242 -0.808 -3.069 C06 QH0 12 QH0 C07 C11 C 0 1 N N N N N N 21.165 18.037 23.753 1.291 -1.949 -4.088 C07 QH0 13 QH0 C08 C12 C 0 1 N N N N N N 19.069 17.824 25.024 0.991 0.514 -3.797 C08 QH0 14 QH0 C09 C13 C 0 1 N N N N N N 19.470 13.445 25.206 -1.044 -0.169 -0.067 C09 QH0 15 QH0 N10 N2 N 0 1 N N N N N N 18.306 12.950 24.728 -2.294 -0.094 -0.564 N10 QH0 16 QH0 C11 C14 C 0 1 N N S N N N 18.079 11.617 24.372 -3.446 -0.268 0.324 C11 QH0 17 QH0 C12 C15 C 0 1 N N N N N N 16.957 11.119 25.241 -4.662 0.444 -0.272 C12 QH0 18 QH0 C14 C16 C 0 1 N N N N N N 18.600 9.848 26.852 -5.564 2.683 -1.021 C14 QH0 19 QH0 N16 N3 N 0 1 N N N N N N 16.901 9.132 28.271 -5.572 3.152 1.330 N16 QH0 20 QH0 O18 O2 O 0 1 N N N N N N 15.174 10.366 27.501 -3.495 2.429 1.884 O18 QH0 21 QH0 C19 C17 C 0 1 N N N N N N 17.697 11.468 22.889 -3.753 -1.759 0.477 C19 QH0 22 QH0 N21 N4 N 1 1 N N N N N N 19.072 10.693 20.890 -2.880 -3.877 1.332 N21 QH0 23 QH0 O22 O3 O -1 1 N N N N N N 20.040 10.866 20.181 -2.024 -4.705 1.075 O22 QH0 24 QH0 O23 O4 O 0 1 N N N N N N 18.259 9.814 20.712 -3.980 -4.238 1.712 O23 QH0 25 QH0 O24 O5 O 0 1 N N N N N N 20.408 12.695 25.312 -0.872 -0.379 1.115 O24 QH0 26 QH0 O25 O6 O 0 1 N N N N N N 20.614 14.329 29.072 3.645 0.364 0.071 O25 QH0 27 QH0 C27 C18 C 0 1 Y N N N N N 20.557 11.925 29.951 5.990 0.792 0.467 C27 QH0 28 QH0 C29 C19 C 0 1 Y N N N N N 21.742 10.074 28.783 7.876 -0.526 1.130 C29 QH0 29 QH0 C30 C20 C 0 1 Y N N N N N 21.277 9.136 29.739 8.124 0.351 2.169 C30 QH0 30 QH0 C31 C21 C 0 1 Y N N N N N 20.459 9.585 30.808 7.305 1.449 2.357 C31 QH0 31 QH0 C32 C22 C 0 1 Y N N N N N 20.090 10.953 30.883 6.242 1.672 1.503 C32 QH0 32 QH0 H1 H1 H 0 1 N N N N N N 17.081 9.117 25.634 -3.456 2.165 -0.804 H1 QH0 33 QH0 H2 H2 H 0 1 N N N N N N 18.348 7.786 27.511 -6.930 4.046 -0.013 H2 QH0 34 QH0 H3 H3 H 0 1 N N N N N N 18.942 8.904 28.786 -7.231 2.317 0.331 H3 QH0 35 QH0 H4 H4 H 0 1 N N N N N N 19.799 11.578 22.712 -1.677 -2.324 0.599 H4 QH0 36 QH0 H5 H5 H 0 1 N N N N N N 18.883 12.698 21.648 -2.447 -2.005 2.172 H5 QH0 37 QH0 H6 H6 H 0 1 N N N N N N 20.641 13.723 31.076 5.055 0.629 -1.444 H6 QH0 38 QH0 H7 H7 H 0 1 N N N N N N 19.094 13.442 30.207 4.633 2.099 -0.534 H7 QH0 39 QH0 H8 H8 H 0 1 N N N N N N 21.784 12.148 28.164 6.613 -0.994 -0.530 H8 QH0 40 QH0 H9 H9 H 0 1 N N N N N N 21.044 15.666 26.977 1.385 -0.624 0.619 H9 QH0 41 QH0 H10 H10 H 0 1 N N N N N N 18.575 15.321 25.680 0.099 0.997 -1.442 H10 QH0 42 QH0 H11 H11 H 0 1 N N N N N N 19.853 15.599 23.568 0.243 -2.046 -1.617 H11 QH0 43 QH0 H12 H12 H 0 1 N N N N N N 21.387 15.328 24.462 -0.846 -1.028 -2.589 H12 QH0 44 QH0 H13 H13 H 0 1 N N N N N N 20.992 17.330 25.801 2.192 -0.755 -2.537 H13 QH0 45 QH0 H14 H14 H 0 1 N N N N N N 21.186 19.098 24.043 0.341 -2.002 -4.620 H14 QH0 46 QH0 H15 H15 H 0 1 N N N N N N 22.195 17.668 23.637 2.096 -1.767 -4.799 H15 QH0 47 QH0 H16 H16 H 0 1 N N N N N N 20.627 17.929 22.799 1.470 -2.891 -3.569 H16 QH0 48 QH0 H17 H17 H 0 1 N N N N N N 18.508 17.276 25.796 0.041 0.461 -4.329 H17 QH0 49 QH0 H18 H18 H 0 1 N N N N N N 19.176 18.876 25.326 0.956 1.327 -3.072 H18 QH0 50 QH0 H19 H19 H 0 1 N N N N N N 18.526 17.771 24.069 1.796 0.696 -4.509 H19 QH0 51 QH0 H20 H20 H 0 1 N N N N N N 17.545 13.590 24.620 -2.432 0.074 -1.509 H20 QH0 52 QH0 H21 H21 H 0 1 N N N N N N 18.976 11.010 24.564 -3.219 0.158 1.302 H21 QH0 53 QH0 H22 H22 H 0 1 N N N N N N 16.584 11.980 25.816 -5.540 0.241 0.342 H22 QH0 54 QH0 H23 H23 H 0 1 N N N N N N 16.164 10.754 24.571 -4.836 0.081 -1.285 H23 QH0 55 QH0 H24 H24 H 0 1 N N N N N N 19.340 9.469 26.132 -5.204 3.568 -1.546 H24 QH0 56 QH0 H25 H25 H 0 1 N Y N N N N 18.970 10.781 27.302 -6.088 2.013 -1.703 H25 QH0 57 QH0 H26 H26 H 0 1 N N N N N N 16.450 8.797 29.098 -5.792 3.599 2.163 H26 QH0 58 QH0 H27 H27 H 0 1 N N N N N N 16.936 12.217 22.625 -3.893 -2.204 -0.509 H27 QH0 59 QH0 H28 H28 H 0 1 N N N N N N 17.296 10.459 22.709 -4.662 -1.885 1.065 H28 QH0 60 QH0 H29 H29 H 0 1 N N N N N N 22.362 9.740 27.964 8.516 -1.384 0.983 H29 QH0 61 QH0 H30 H30 H 0 1 N N N N N N 21.542 8.092 29.655 8.957 0.178 2.834 H30 QH0 62 QH0 H31 H31 H 0 1 N N N N N N 20.119 8.889 31.561 7.499 2.134 3.169 H31 QH0 63 QH0 H32 H32 H 0 1 N N N N N N 19.430 11.270 31.677 5.602 2.530 1.650 H32 QH0 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QH0 O22 N21 SING N N 1 QH0 O23 N21 DOUB N N 2 QH0 N21 C20 SING N N 3 QH0 C20 C19 SING N N 4 QH0 C19 C11 SING N N 5 QH0 C07 C06 SING N N 6 QH0 C11 N10 SING N N 7 QH0 C11 C12 SING N N 8 QH0 C05 C06 SING N N 9 QH0 C05 C04 SING N N 10 QH0 N10 C09 SING N N 11 QH0 C06 C08 SING N N 12 QH0 C09 O24 DOUB N N 13 QH0 C09 C04 SING N N 14 QH0 C12 C13 SING N N 15 QH0 C04 N03 SING N N 16 QH0 C13 C14 SING N N 17 QH0 C13 C17 SING N N 18 QH0 C14 C15 SING N N 19 QH0 N03 C02 SING N N 20 QH0 C17 O18 DOUB N N 21 QH0 C17 N16 SING N N 22 QH0 C15 N16 SING N N 23 QH0 C02 O01 DOUB N N 24 QH0 C02 O25 SING N N 25 QH0 C29 C28 DOUB Y N 26 QH0 C29 C30 SING Y N 27 QH0 C28 C27 SING Y N 28 QH0 O25 C26 SING N N 29 QH0 C30 C31 DOUB Y N 30 QH0 C27 C26 SING N N 31 QH0 C27 C32 DOUB Y N 32 QH0 C31 C32 SING Y N 33 QH0 C13 H1 SING N N 34 QH0 C15 H2 SING N N 35 QH0 C15 H3 SING N N 36 QH0 C20 H4 SING N N 37 QH0 C20 H5 SING N N 38 QH0 C26 H6 SING N N 39 QH0 C26 H7 SING N N 40 QH0 C28 H8 SING N N 41 QH0 N03 H9 SING N N 42 QH0 C04 H10 SING N N 43 QH0 C05 H11 SING N N 44 QH0 C05 H12 SING N N 45 QH0 C06 H13 SING N N 46 QH0 C07 H14 SING N N 47 QH0 C07 H15 SING N N 48 QH0 C07 H16 SING N N 49 QH0 C08 H17 SING N N 50 QH0 C08 H18 SING N N 51 QH0 C08 H19 SING N N 52 QH0 N10 H20 SING N N 53 QH0 C11 H21 SING N N 54 QH0 C12 H22 SING N N 55 QH0 C12 H23 SING N N 56 QH0 C14 H24 SING N N 57 QH0 C14 H25 SING N N 58 QH0 N16 H26 SING N N 59 QH0 C19 H27 SING N N 60 QH0 C19 H28 SING N N 61 QH0 C29 H29 SING N N 62 QH0 C30 H30 SING N N 63 QH0 C31 H31 SING N N 64 QH0 C32 H32 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QH0 InChI InChI 1.06 "InChI=1S/C22H32N4O6/c1-15(2)12-19(25-22(29)32-14-16-6-4-3-5-7-16)21(28)24-18(9-11-26(30)31)13-17-8-10-23-20(17)27/h3-7,15,17-19H,8-14H2,1-2H3,(H,23,27)(H,24,28)(H,25,29)/t17-,18-,19+/m1/s1" QH0 InChIKey InChI 1.06 AHDULYSHSMKYBB-QRVBRYPASA-N QH0 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@H](CC[N+]([O-])=O)C[C@H]2CCNC2=O" QH0 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CC[N+]([O-])=O)C[CH]2CCNC2=O" QH0 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)C[C@@H](C(=O)N[C@H](CC[N+](=O)[O-])C[C@H]1CCNC1=O)NC(=O)OCc2ccccc2" QH0 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)CC(C(=O)NC(CC[N+](=O)[O-])CC1CCNC1=O)NC(=O)OCc2ccccc2" # _pdbx_chem_comp_identifier.comp_id QH0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(phenylmethyl) ~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-4-nitro-1-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QH0 "Create component" 2022-10-31 PDBE QH0 "Modify formula" 2022-11-01 PDBE QH0 "Initial release" 2023-11-08 RCSB QH0 "Other modification" 2024-01-16 PDBE #