data_QIP # _chem_comp.id QIP _chem_comp.name "2-[(2~{S})-2-(3-methylsulfanylpropanimidoyl)-2-oxidanyl-4-oxidanylidene-imidazolidin-1-yl]-2-oxidanylidene-ethanamide" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H14 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id "MET, TYR, GLY" _chem_comp.pdbx_synonyms "CHROMOPHORE (MET-TYR-GLY)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-01 _chem_comp.pdbx_modified_date 2023-03-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.297 _chem_comp.one_letter_code MYG _chem_comp.three_letter_code QIP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8B7G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QIP O1 O1 O 0 1 N N N -9.018 -22.205 25.570 -0.355 0.565 -2.091 O1 QIP 1 QIP CB1 C3 C 0 1 N N N -10.345 -20.630 23.797 2.167 0.343 -0.407 CB1 QIP 2 QIP OB2 O2 O 0 1 N N N -7.123 -22.919 26.419 -4.110 -0.659 0.881 OB2 QIP 3 QIP CG1 C4 C 0 1 N N N -11.728 -21.382 23.720 3.143 -0.550 0.362 CG1 QIP 4 QIP SD S1 S 0 1 N N N -12.482 -21.907 22.076 4.846 -0.100 -0.074 SD QIP 5 QIP CE C5 C 0 1 N N N -14.168 -21.693 22.747 5.838 -1.248 0.920 CE QIP 6 QIP C1 C6 C 0 1 N N S -8.646 -20.907 25.859 -0.404 0.706 -0.670 C1 QIP 7 QIP C2 C7 C 0 1 N N N -6.232 -21.125 25.280 -2.116 -1.104 -0.279 C2 QIP 8 QIP C3 C8 C 0 1 N N N -7.940 -19.405 27.379 -1.446 2.481 0.363 C3 QIP 9 QIP CA1 C10 C 0 1 N N N -9.627 -20.138 25.157 0.753 -0.030 -0.045 CA1 QIP 10 QIP CA2 C11 C 0 1 N N N -6.220 -22.498 25.781 -3.438 -1.487 0.302 CA2 QIP 11 QIP CA3 C12 C 0 1 N N N -7.078 -19.078 26.116 -2.352 1.283 0.502 CA3 QIP 12 QIP N1 N1 N 0 1 N N N -9.953 -18.865 25.383 0.534 -0.971 0.794 N1 QIP 13 QIP N2 N2 N 0 1 N N N -5.142 -23.111 25.529 -3.884 -2.754 0.185 N2 QIP 14 QIP N3 N3 N 0 1 N N N -7.259 -20.374 25.499 -1.670 0.163 -0.162 N3 QIP 15 QIP N N4 N 0 1 N Y N -8.510 -20.631 27.283 -0.342 2.122 -0.311 N QIP 16 QIP O2 O4 O 0 1 N N N -5.213 -20.818 24.634 -1.444 -1.932 -0.857 O2 QIP 17 QIP O3 O5 O 0 1 N N N -8.230 -18.554 28.289 -1.679 3.592 0.790 O3 QIP 18 QIP H1 H1 H 0 1 N N N -8.332 -22.801 25.848 0.458 0.903 -2.492 H1 QIP 19 QIP H8 H8 H 0 1 N N N -14.906 -21.941 21.970 6.897 -1.067 0.735 H8 QIP 20 QIP H9 H9 H 0 1 N N N -14.306 -22.360 23.611 5.622 -1.094 1.977 H9 QIP 21 QIP H10 H10 H 0 1 N N N -14.306 -20.649 23.064 5.592 -2.274 0.645 H10 QIP 22 QIP H14 H14 H 0 1 N N N -6.027 -18.861 26.358 -2.507 1.054 1.557 H14 QIP 23 QIP H15 H15 H 0 1 N N N -7.493 -18.255 25.515 -3.308 1.479 0.018 H15 QIP 24 QIP H11 H16 H 0 1 N Y N -9.421 -18.469 26.131 -0.376 -1.212 1.027 H11 QIP 25 QIP H H19 H 0 1 N N N -4.999 -24.036 25.881 -3.347 -3.416 -0.277 H QIP 26 QIP H2 H20 H 0 1 N N N -4.433 -22.670 24.978 -4.742 -3.003 0.562 H2 QIP 27 QIP H5 H5 H 0 1 N N N -9.621 -21.300 23.310 2.346 1.386 -0.146 H5 QIP 28 QIP H7 H7 H 0 1 N N N -10.472 -19.722 23.189 2.316 0.206 -1.478 H7 QIP 29 QIP H12 H12 H 0 1 N N N -12.465 -20.723 24.201 2.994 -0.413 1.433 H12 QIP 30 QIP H13 H13 H 0 1 N N N -11.614 -22.300 24.315 2.964 -1.593 0.100 H13 QIP 31 QIP H3 H3 H 0 1 N Y N -8.783 -21.227 28.038 0.393 2.717 -0.529 H3 QIP 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QIP SD CE SING N N 1 QIP SD CG1 SING N N 2 QIP CG1 CB1 SING N N 3 QIP CB1 CA1 SING N N 4 QIP O2 C2 DOUB N N 5 QIP CA1 N1 DOUB N N 6 QIP CA1 C1 SING N N 7 QIP C2 N3 SING N N 8 QIP C2 CA2 SING N N 9 QIP N3 C1 SING N N 10 QIP N3 CA3 SING N N 11 QIP N2 CA2 SING N N 12 QIP O1 C1 SING N N 13 QIP CA2 OB2 DOUB N N 14 QIP C1 N SING N N 15 QIP CA3 C3 SING N N 16 QIP N C3 SING N N 17 QIP C3 O3 DOUB N N 18 QIP O1 H1 SING N N 19 QIP CE H8 SING N N 20 QIP CE H9 SING N N 21 QIP CE H10 SING N N 22 QIP CA3 H14 SING N N 23 QIP CA3 H15 SING N N 24 QIP N1 H11 SING N N 25 QIP N2 H SING N N 26 QIP N2 H2 SING N N 27 QIP CB1 H5 SING N N 28 QIP CB1 H7 SING N N 29 QIP CG1 H12 SING N N 30 QIP CG1 H13 SING N N 31 QIP N H3 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QIP InChI InChI 1.06 "InChI=1S/C9H14N4O4S/c1-18-3-2-5(10)9(17)12-6(14)4-13(9)8(16)7(11)15/h10,17H,2-4H2,1H3,(H2,11,15)(H,12,14)/b10-5-/t9-/m0/s1" QIP InChIKey InChI 1.06 IAJSNMSZNKJHRX-QFQXNISHSA-N QIP SMILES_CANONICAL CACTVS 3.385 "CSCCC(=N)[C@]1(O)NC(=O)CN1C(=O)C(N)=O" QIP SMILES CACTVS 3.385 "CSCCC(=N)[C]1(O)NC(=O)CN1C(=O)C(N)=O" QIP SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(/CCSC)\[C@@]1(NC(=O)CN1C(=O)C(=O)N)O" QIP SMILES "OpenEye OEToolkits" 3.1.0.0 "CSCCC(=N)C1(NC(=O)CN1C(=O)C(=O)N)O" # _pdbx_chem_comp_identifier.comp_id QIP _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "2-[(2~{S})-2-(3-methylsulfanylpropanimidoyl)-2-oxidanyl-4-oxidanylidene-imidazolidin-1-yl]-2-oxidanylidene-ethanamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id QIP _pdbx_chem_comp_synonyms.name "CHROMOPHORE (MET-TYR-GLY)" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QIP "Create component" 2022-11-18 PDBE QIP "Initial release" 2023-04-05 RCSB #