data_QLL # _chem_comp.id QLL _chem_comp.name "2-({[4-(benzyloxy)-1H-indazol-3-yl]methyl}sulfanyl)-5-(methylsulfanyl)pyrimidin-4-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H18 N4 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-05-08 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 410.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QLL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FX7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QLL C10 C1 C 0 1 Y N N 20.901 -3.584 -22.851 -4.735 -1.493 0.271 C10 QLL 1 QLL C11 C2 C 0 1 Y N N 18.897 -3.897 -24.122 -3.422 0.538 0.047 C11 QLL 2 QLL C13 C3 C 0 1 Y N N 13.776 -4.837 -19.843 2.982 -0.925 1.088 C13 QLL 3 QLL C18 C4 C 0 1 N N N 16.876 -4.224 -25.319 -2.237 2.585 -0.194 C18 QLL 4 QLL C19 C5 C 0 1 Y N N 15.413 -4.321 -25.099 -0.829 3.118 -0.143 C19 QLL 5 QLL C20 C6 C 0 1 Y N N 21.022 -3.485 -25.162 -5.811 0.594 -0.214 C20 QLL 6 QLL C21 C7 C 0 1 Y N N 21.692 -3.436 -23.992 -5.892 -0.759 0.019 C21 QLL 7 QLL C22 C8 C 0 1 Y N N 19.647 -3.716 -25.248 -4.582 1.243 -0.200 C22 QLL 8 QLL C23 C9 C 0 1 N N N 10.938 -5.177 -19.716 5.570 -0.304 2.332 C23 QLL 9 QLL C24 C10 C 0 1 Y N N 14.573 -4.500 -26.187 -0.060 3.153 -1.291 C24 QLL 10 QLL C25 C11 C 0 1 Y N N 14.813 -4.185 -23.860 -0.307 3.576 1.053 C25 QLL 11 QLL C26 C12 C 0 1 Y N N 13.429 -4.282 -23.730 0.985 4.065 1.100 C26 QLL 12 QLL C27 C13 C 0 1 Y N N 13.212 -4.606 -26.054 1.232 3.642 -1.243 C27 QLL 13 QLL C28 C14 C 0 1 Y N N 12.609 -4.463 -24.817 1.756 4.095 -0.047 C28 QLL 14 QLL N1 N1 N 0 1 Y N N 15.715 -6.328 -18.590 2.349 -1.528 -1.470 N1 QLL 15 QLL N2 N2 N 0 1 Y N N 20.175 -3.753 -20.764 -3.112 -2.980 0.705 N2 QLL 16 QLL C3 C15 C 0 1 Y N N 19.563 -3.808 -22.881 -3.487 -0.845 0.286 C3 QLL 17 QLL C4 C16 C 0 1 Y N N 19.129 -3.899 -21.577 -2.513 -1.833 0.564 C4 QLL 18 QLL C5 C17 C 0 1 Y N N 14.453 -6.508 -18.304 3.623 -1.289 -1.189 C5 QLL 19 QLL C6 C18 C 0 1 Y N N 16.027 -5.411 -19.498 1.426 -1.476 -0.521 C6 QLL 20 QLL N7 N3 N 0 1 Y N N 21.290 -3.574 -21.537 -4.491 -2.818 0.527 N7 QLL 21 QLL C8 C19 C 0 1 Y N N 13.468 -5.807 -18.918 3.981 -0.974 0.127 C8 QLL 22 QLL N9 N4 N 0 1 Y N N 15.072 -4.647 -20.100 1.731 -1.181 0.734 N9 QLL 23 QLL S12 S1 S 0 1 N N N 17.696 -5.222 -19.902 -0.254 -1.801 -0.941 S12 QLL 24 QLL C14 C20 C 0 1 N N N 17.761 -4.104 -21.123 -1.029 -1.596 0.682 C14 QLL 25 QLL O15 O1 O 0 1 N N N 17.554 -4.099 -24.108 -2.224 1.178 0.058 O15 QLL 26 QLL S16 S2 S 0 1 N N N 11.806 -6.185 -18.535 5.659 -0.647 0.553 S16 QLL 27 QLL O17 O2 O 0 1 N N N 14.128 -7.395 -17.329 4.565 -1.344 -2.164 O17 QLL 28 QLL H30 H1 H 0 1 N N N 13.009 -4.259 -20.336 3.221 -0.686 2.114 H30 QLL 29 QLL H35 H2 H 0 1 N N N 17.089 -3.344 -25.943 -2.843 3.084 0.562 H35 QLL 30 QLL H34 H3 H 0 1 N N N 17.224 -5.132 -25.834 -2.661 2.773 -1.181 H34 QLL 31 QLL H36 H4 H 0 1 N N N 21.576 -3.338 -26.077 -6.711 1.158 -0.409 H36 QLL 32 QLL H37 H5 H 0 1 N N N 22.761 -3.293 -23.942 -6.853 -1.253 0.006 H37 QLL 33 QLL H38 H6 H 0 1 N N N 19.172 -3.752 -26.217 -4.535 2.306 -0.384 H38 QLL 34 QLL H39 H7 H 0 1 N N N 9.854 -5.315 -19.590 6.568 -0.085 2.710 H39 QLL 35 QLL H41 H8 H 0 1 N N N 11.194 -4.120 -19.554 4.919 0.553 2.504 H41 QLL 36 QLL H40 H9 H 0 1 N N N 11.230 -5.473 -20.735 5.168 -1.175 2.850 H40 QLL 37 QLL H42 H10 H 0 1 N N N 15.006 -4.558 -27.175 -0.469 2.798 -2.226 H42 QLL 38 QLL H43 H11 H 0 1 N N N 15.422 -4.002 -22.987 -0.909 3.553 1.949 H43 QLL 39 QLL H44 H12 H 0 1 N N N 12.988 -4.213 -22.746 1.393 4.424 2.034 H44 QLL 40 QLL H45 H13 H 0 1 N N N 12.604 -4.803 -26.925 1.832 3.669 -2.141 H45 QLL 41 QLL H46 H14 H 0 1 N N N 11.535 -4.493 -24.710 2.765 4.477 -0.010 H46 QLL 42 QLL H29 H15 H 0 1 N N N 22.225 -3.456 -21.202 -5.158 -3.520 0.581 H29 QLL 43 QLL H32 H16 H 0 1 N N N 17.358 -3.149 -20.756 -0.851 -0.583 1.045 H32 QLL 44 QLL H31 H17 H 0 1 N N N 17.152 -4.459 -21.967 -0.601 -2.313 1.382 H31 QLL 45 QLL H33 H18 H 0 1 N N N 14.920 -7.781 -16.974 4.714 -0.501 -2.615 H33 QLL 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QLL N2 C4 DOUB Y N 1 QLL C3 C4 SING Y N 2 QLL N1 C5 DOUB Y N 3 QLL N1 C6 SING Y N 4 QLL N2 N7 SING Y N 5 QLL C5 C8 SING Y N 6 QLL C6 N9 DOUB Y N 7 QLL C3 C10 DOUB Y N 8 QLL N7 C10 SING Y N 9 QLL C3 C11 SING Y N 10 QLL C6 S12 SING N N 11 QLL C8 C13 DOUB Y N 12 QLL N9 C13 SING Y N 13 QLL C4 C14 SING N N 14 QLL S12 C14 SING N N 15 QLL C11 O15 SING N N 16 QLL C8 S16 SING N N 17 QLL C5 O17 SING N N 18 QLL O15 C18 SING N N 19 QLL C18 C19 SING N N 20 QLL C10 C21 SING Y N 21 QLL C20 C21 DOUB Y N 22 QLL C11 C22 DOUB Y N 23 QLL C20 C22 SING Y N 24 QLL S16 C23 SING N N 25 QLL C19 C24 DOUB Y N 26 QLL C19 C25 SING Y N 27 QLL C25 C26 DOUB Y N 28 QLL C24 C27 SING Y N 29 QLL C26 C28 SING Y N 30 QLL C27 C28 DOUB Y N 31 QLL C13 H30 SING N N 32 QLL C18 H35 SING N N 33 QLL C18 H34 SING N N 34 QLL C20 H36 SING N N 35 QLL C21 H37 SING N N 36 QLL C22 H38 SING N N 37 QLL C23 H39 SING N N 38 QLL C23 H41 SING N N 39 QLL C23 H40 SING N N 40 QLL C24 H42 SING N N 41 QLL C25 H43 SING N N 42 QLL C26 H44 SING N N 43 QLL C27 H45 SING N N 44 QLL C28 H46 SING N N 45 QLL N7 H29 SING N N 46 QLL C14 H32 SING N N 47 QLL C14 H31 SING N N 48 QLL O17 H33 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QLL SMILES ACDLabs 12.01 "Oc1nc(ncc1SC)SCc1n[NH]c2cccc(OCc3ccccc3)c21" QLL InChI InChI 1.06 "InChI=1S/C20H18N4O2S2/c1-27-17-10-21-20(22-19(17)25)28-12-15-18-14(23-24-15)8-5-9-16(18)26-11-13-6-3-2-4-7-13/h2-10H,11-12H2,1H3,(H,23,24)(H,21,22,25)" QLL InChIKey InChI 1.06 WPFAYHFCRNQLGD-UHFFFAOYSA-N QLL SMILES_CANONICAL CACTVS 3.385 "CSc1cnc(SCc2n[nH]c3cccc(OCc4ccccc4)c23)nc1O" QLL SMILES CACTVS 3.385 "CSc1cnc(SCc2n[nH]c3cccc(OCc4ccccc4)c23)nc1O" QLL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CSc1cnc(nc1O)SCc2c3c(cccc3OCc4ccccc4)[nH]n2" QLL SMILES "OpenEye OEToolkits" 2.0.7 "CSc1cnc(nc1O)SCc2c3c(cccc3OCc4ccccc4)[nH]n2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier QLL "SYSTEMATIC NAME" ACDLabs 12.01 "2-({[4-(benzyloxy)-1H-indazol-3-yl]methyl}sulfanyl)-5-(methylsulfanyl)pyrimidin-4-ol" QLL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-methylsulfanyl-2-[(4-phenylmethoxy-1~{H}-indazol-3-yl)methylsulfanyl]pyrimidin-4-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QLL "Create component" 2023-05-08 RCSB QLL "Initial release" 2023-06-14 RCSB #