data_QQ8 # _chem_comp.id QQ8 _chem_comp.name "(4~{S})-4-azanyl-5-formamido-pentanamide" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H13 N3 O3" _chem_comp.mon_nstd_parent_comp_id GLN _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-23 _chem_comp.pdbx_modified_date 2024-06-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 175.186 _chem_comp.one_letter_code Q _chem_comp.three_letter_code QQ8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ZUF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QQ8 O OCA O 0 1 N N N N Y Y 2.545 -13.624 -2.957 3.703 -1.413 -0.151 O QQ8 1 QQ8 C CAO C 0 1 N N N N Y Y 2.085 -13.655 -4.089 3.635 -0.218 0.058 C QQ8 2 QQ8 NM NM N 0 1 N N N N Y N 1.535 -14.710 -4.619 2.432 0.377 0.180 NM QQ8 3 QQ8 CM CM C 0 1 N N N N Y N 1.419 -15.958 -3.870 1.206 -0.417 0.063 CM QQ8 4 QQ8 CA CAA C 0 1 N N S N Y N -0.069 -16.264 -3.736 -0.011 0.493 0.240 CA QQ8 5 QQ8 N NA N 0 1 N N N Y Y N -0.612 -16.440 -5.061 0.063 1.602 -0.721 N QQ8 6 QQ8 CB CB C 0 1 N N N N N N -0.217 -17.555 -2.935 -1.289 -0.311 -0.006 CB QQ8 7 QQ8 CG CG C 0 1 N N N N N N -1.615 -17.743 -2.458 -2.507 0.565 0.293 CG QQ8 8 QQ8 CD CD C 0 1 N N N N N N -1.750 -19.016 -1.672 -3.767 -0.227 0.050 CD QQ8 9 QQ8 OE1 OE1 O 0 1 N N N N N N -1.122 -20.042 -1.987 -3.696 -1.378 -0.324 OE1 QQ8 10 QQ8 NE2 NE2 N 0 1 N N N N N N -2.553 -18.957 -0.634 -4.971 0.344 0.250 NE2 QQ8 11 QQ8 H6 H2 H 0 1 N N N N Y N 1.186 -14.664 -5.555 2.377 1.331 0.346 H6 QQ8 12 QQ8 H3 H3 H 0 1 N N N N Y N 1.924 -16.771 -4.411 1.170 -0.885 -0.921 H3 QQ8 13 QQ8 H4 H4 H 0 1 N N N N Y N 1.872 -15.844 -2.874 1.198 -1.189 0.832 H4 QQ8 14 QQ8 HA H5 H 0 1 N N N N Y N -0.573 -15.440 -3.210 -0.022 0.891 1.255 HA QQ8 15 QQ8 H H6 H 0 1 N N N Y Y N -1.589 -16.642 -4.997 0.074 1.258 -1.669 H QQ8 16 QQ8 H2 H7 H 0 1 N Y N Y Y N -0.479 -15.602 -5.590 -0.696 2.252 -0.581 H2 QQ8 17 QQ8 H9 H9 H 0 1 N N N N N N 0.060 -18.406 -3.574 -1.320 -0.635 -1.046 H9 QQ8 18 QQ8 H10 H10 H 0 1 N N N N N N 0.455 -17.515 -2.065 -1.300 -1.184 0.647 H10 QQ8 19 QQ8 H11 H11 H 0 1 N N N N N N -1.894 -16.893 -1.817 -2.476 0.888 1.333 H11 QQ8 20 QQ8 H12 H12 H 0 1 N N N N N N -2.289 -17.784 -3.326 -2.496 1.438 -0.360 H12 QQ8 21 QQ8 H13 H13 H 0 1 N N N N N N -2.682 -19.762 -0.055 -5.027 1.265 0.549 H13 QQ8 22 QQ8 H14 H14 H 0 1 N N N N N N -3.036 -18.107 -0.423 -5.781 -0.165 0.094 H14 QQ8 23 QQ8 OXT OXT O 0 1 N Y N N Y Y ? ? ? 4.761 0.511 0.171 O1 QQ8 24 QQ8 HXT HXT H 0 1 N Y N N Y Y ? ? ? 5.600 0.040 0.080 H1 QQ8 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QQ8 N CA SING N N 1 QQ8 NM C SING N N 2 QQ8 NM CM SING N N 3 QQ8 C O DOUB N N 4 QQ8 CM CA SING N N 5 QQ8 CA CB SING N N 6 QQ8 CB CG SING N N 7 QQ8 CG CD SING N N 8 QQ8 OE1 CD DOUB N N 9 QQ8 CD NE2 SING N N 10 QQ8 NM H6 SING N N 11 QQ8 CM H3 SING N N 12 QQ8 CM H4 SING N N 13 QQ8 CA HA SING N N 14 QQ8 N H SING N N 15 QQ8 N H2 SING N N 16 QQ8 CB H9 SING N N 17 QQ8 CB H10 SING N N 18 QQ8 CG H11 SING N N 19 QQ8 CG H12 SING N N 20 QQ8 NE2 H13 SING N N 21 QQ8 NE2 H14 SING N N 22 QQ8 C OXT SING N N 23 QQ8 OXT HXT SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QQ8 InChI InChI 1.06 "InChI=1S/C6H13N3O3/c7-4(1-2-5(8)10)3-9-6(11)12/h4,9H,1-3,7H2,(H2,8,10)(H,11,12)/t4-/m0/s1" QQ8 InChIKey InChI 1.06 MISYRPXYMKXXTM-BYPYZUCNSA-N QQ8 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCC(N)=O)CNC(O)=O" QQ8 SMILES CACTVS 3.385 "N[CH](CCC(N)=O)CNC(O)=O" QQ8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CC(=O)N)[C@@H](CNC(=O)O)N" QQ8 SMILES "OpenEye OEToolkits" 2.0.7 "C(CC(=O)N)C(CNC(=O)O)N" # _pdbx_chem_comp_identifier.comp_id QQ8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S})-2,5-bis(azanyl)-5-oxidanylidene-pentyl]carbamic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QQ8 "Create component" 2020-07-23 PDBE QQ8 "Initial release" 2021-06-09 RCSB QQ8 "Modify backbone" 2023-11-03 PDBE QQ8 "Other modification" 2024-06-28 PDBE #