data_QR4
#
_chem_comp.id QR4
_chem_comp.name "{3-[(3aR,4R,5S,6aR)-4-azaniumyl-4-carboxyoctahydrocyclopenta[b]pyrrol-1-ium-5-yl]propyl}(trihydroxy)borate(1-)"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H24 B N2 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2019-12-10
_chem_comp.pdbx_modified_date 2020-05-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 275.130
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code QR4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6V7D
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QR4 O O1 O 0 1 N N N 15.181 8.346 23.329 -1.193 -1.126 -1.540 O QR4 1
QR4 C4 C1 C 0 1 N N N 15.270 7.285 23.919 -1.761 -1.560 -0.566 C4 QR4 2
QR4 O1 O2 O 0 1 N N N 16.418 6.781 24.330 -2.366 -2.757 -0.619 O1 QR4 3
QR4 C3 C2 C 0 1 N N R 14.034 6.412 24.277 -1.784 -0.760 0.711 C3 QR4 4
QR4 N N1 N 1 1 N N N 12.827 7.013 23.681 -1.943 -1.657 1.863 N QR4 5
QR4 C5 C3 C 0 1 N N S 14.201 4.915 23.765 -0.480 0.053 0.849 C5 QR4 6
QR4 C9 C4 C 0 1 N N N 14.684 4.169 25.013 -0.833 1.438 0.255 C9 QR4 7
QR4 C10 C5 C 0 1 N N R 13.828 4.761 26.137 -2.288 1.666 0.730 C10 QR4 8
QR4 C2 C6 C 0 1 N N R 13.800 6.268 25.845 -2.935 0.257 0.674 C2 QR4 9
QR4 C1 C7 C 0 1 N N N 14.767 6.893 26.872 -3.591 0.228 -0.729 C1 QR4 10
QR4 N1 N2 N 1 1 N N N 14.438 4.626 27.509 -2.985 2.501 -0.266 N1 QR4 11
QR4 C C8 C 0 1 N N N 14.623 6.000 28.081 -4.053 1.696 -0.895 C QR4 12
QR4 C6 C9 C 0 1 N N N 15.099 4.643 22.543 0.646 -0.603 0.047 C6 QR4 13
QR4 C7 C10 C 0 1 N N N 14.847 3.286 21.864 1.968 0.104 0.355 C7 QR4 14
QR4 C8 C11 C 0 1 N N N 15.281 3.218 20.401 3.095 -0.552 -0.446 C8 QR4 15
QR4 B B1 B -1 1 N N N 14.825 1.920 19.665 4.475 0.185 -0.125 B QR4 16
QR4 O4 O3 O 0 1 N N N 13.346 1.863 19.447 4.378 1.505 -0.470 O4 QR4 17
QR4 O3 O4 O 0 1 N N N 15.158 0.663 20.344 4.746 0.083 1.211 O3 QR4 18
QR4 O2 O5 O 0 1 N N N 15.479 1.754 18.320 5.482 -0.400 -0.841 O2 QR4 19
QR4 H10 H1 H 0 1 N N N 17.126 7.369 24.093 -2.321 -3.234 -1.459 H10 QR4 20
QR4 H8 H2 H 0 1 N N N 12.727 7.953 24.006 -1.177 -2.314 1.886 H8 QR4 21
QR4 H23 H3 H 0 1 N N N 12.912 7.012 22.685 -1.946 -1.114 2.714 H23 QR4 22
QR4 H9 H4 H 0 1 N N N 12.023 6.481 23.948 -2.814 -2.159 1.781 H9 QR4 23
QR4 H11 H5 H 0 1 N N N 13.194 4.544 23.525 -0.199 0.147 1.898 H11 QR4 24
QR4 H21 H6 H 0 1 N N N 14.512 3.087 24.916 -0.173 2.207 0.655 H21 QR4 25
QR4 H22 H7 H 0 1 N N N 15.753 4.355 25.193 -0.783 1.414 -0.834 H22 QR4 26
QR4 H1 H8 H 0 1 N N N 12.811 4.342 26.113 -2.326 2.107 1.726 H1 QR4 27
QR4 H H9 H 0 1 N N N 12.788 6.639 26.062 -3.653 0.097 1.478 H QR4 28
QR4 H7 H10 H 0 1 N N N 15.801 6.882 26.496 -2.863 -0.041 -1.495 H7 QR4 29
QR4 H6 H11 H 0 1 N N N 14.474 7.926 27.109 -4.442 -0.453 -0.747 H6 QR4 30
QR4 H3 H12 H 0 1 N N N 13.830 4.094 28.098 -3.389 3.305 0.190 H3 QR4 31
QR4 H2 H13 H 0 1 N N N 15.323 4.166 27.441 -2.330 2.806 -0.970 H2 QR4 32
QR4 H4 H14 H 0 1 N N N 15.527 6.043 28.707 -4.145 1.948 -1.951 H4 QR4 33
QR4 H5 H15 H 0 1 N N N 13.748 6.293 28.680 -5.001 1.856 -0.381 H5 QR4 34
QR4 H12 H16 H 0 1 N N N 16.148 4.674 22.872 0.724 -1.654 0.323 H12 QR4 35
QR4 H13 H17 H 0 1 N N N 14.923 5.437 21.802 0.430 -0.521 -1.018 H13 QR4 36
QR4 H15 H18 H 0 1 N N N 13.769 3.073 21.913 1.891 1.156 0.080 H15 QR4 37
QR4 H14 H19 H 0 1 N N N 15.399 2.515 22.422 2.185 0.022 1.420 H14 QR4 38
QR4 H16 H20 H 0 1 N N N 16.379 3.270 20.363 3.172 -1.604 -0.171 H16 QR4 39
QR4 H17 H21 H 0 1 N N N 14.854 4.083 19.873 2.878 -0.470 -1.512 H17 QR4 40
QR4 H20 H22 H 0 1 N N N 12.899 1.965 20.279 5.182 2.015 -0.303 H20 QR4 41
QR4 H19 H23 H 0 1 N N N 14.785 0.666 21.218 4.072 0.478 1.780 H19 QR4 42
QR4 H18 H24 H 0 1 N N N 16.423 1.785 18.420 5.355 -0.364 -1.799 H18 QR4 43
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QR4 O2 B SING N N 1
QR4 O4 B SING N N 2
QR4 B O3 SING N N 3
QR4 B C8 SING N N 4
QR4 C8 C7 SING N N 5
QR4 C7 C6 SING N N 6
QR4 C6 C5 SING N N 7
QR4 O C4 DOUB N N 8
QR4 N C3 SING N N 9
QR4 C5 C3 SING N N 10
QR4 C5 C9 SING N N 11
QR4 C4 C3 SING N N 12
QR4 C4 O1 SING N N 13
QR4 C3 C2 SING N N 14
QR4 C9 C10 SING N N 15
QR4 C2 C10 SING N N 16
QR4 C2 C1 SING N N 17
QR4 C10 N1 SING N N 18
QR4 C1 C SING N N 19
QR4 N1 C SING N N 20
QR4 O1 H10 SING N N 21
QR4 N H8 SING N N 22
QR4 N H23 SING N N 23
QR4 N H9 SING N N 24
QR4 C5 H11 SING N N 25
QR4 C9 H21 SING N N 26
QR4 C9 H22 SING N N 27
QR4 C10 H1 SING N N 28
QR4 C2 H SING N N 29
QR4 C1 H7 SING N N 30
QR4 C1 H6 SING N N 31
QR4 N1 H3 SING N N 32
QR4 N1 H2 SING N N 33
QR4 C H4 SING N N 34
QR4 C H5 SING N N 35
QR4 C6 H12 SING N N 36
QR4 C6 H13 SING N N 37
QR4 C7 H15 SING N N 38
QR4 C7 H14 SING N N 39
QR4 C8 H16 SING N N 40
QR4 C8 H17 SING N N 41
QR4 O4 H20 SING N N 42
QR4 O3 H19 SING N N 43
QR4 O2 H18 SING N N 44
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QR4 SMILES ACDLabs 12.01 "O=C(C1(C2C(CC1CCC[B-](O)(O)O)[NH2+]CC2)[NH3+])O"
QR4 InChI InChI 1.03 "InChI=1S/C11H22BN2O5/c13-11(10(15)16)7(2-1-4-12(17,18)19)6-9-8(11)3-5-14-9/h7-9,14,17-19H,1-6,13H2,(H,15,16)/q-1/p+2/t7-,8+,9+,11+/m0/s1"
QR4 InChIKey InChI 1.03 ZNCURAYGFUECIT-YSSBGUOXSA-P
QR4 SMILES_CANONICAL CACTVS 3.385 "[NH3+][C@@]1([C@@H](CCC[B-](O)(O)O)C[C@H]2[NH2+]CC[C@@H]12)C(O)=O"
QR4 SMILES CACTVS 3.385 "[NH3+][C]1([CH](CCC[B-](O)(O)O)C[CH]2[NH2+]CC[CH]12)C(O)=O"
QR4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-](CCC[C@H]1C[C@@H]2[C@H]([C@]1(C(=O)O)[NH3+])CC[NH2+]2)(O)(O)O"
QR4 SMILES "OpenEye OEToolkits" 2.0.7 "[B-](CCCC1CC2C(C1(C(=O)O)[NH3+])CC[NH2+]2)(O)(O)O"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
QR4 "SYSTEMATIC NAME" ACDLabs 12.01 "{3-[(3aR,4R,5S,6aR)-4-azaniumyl-4-carboxyoctahydrocyclopenta[b]pyrrol-1-ium-5-yl]propyl}(trihydroxy)borate(1-)"
QR4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[(3~{a}~{R},4~{R},5~{S},6~{a}~{R})-4-azaniumyl-4-carboxy-2,3,3~{a},5,6,6~{a}-hexahydro-1~{H}-cyclopenta[b]pyrrol-1-ium-5-yl]propyl-tris(oxidanyl)boranuide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QR4 "Create component" 2019-12-10 RCSB
QR4 "Initial release" 2020-05-06 RCSB
##