data_QRH # _chem_comp.id QRH _chem_comp.name "(2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H38 N O3 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-29 _chem_comp.pdbx_modified_date 2021-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 563.666 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QRH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ZWE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QRH C02 C1 C 0 1 N N N -118.457 38.177 3.364 -3.967 -0.667 -0.276 C02 QRH 1 QRH C03 C2 C 0 1 N N N -119.545 37.538 2.513 -5.222 -0.013 -0.231 C03 QRH 2 QRH O01 O1 O 0 1 N N N -117.512 37.510 3.642 -3.915 -1.884 -0.274 O01 QRH 3 QRH C04 C3 C 0 1 N N N -119.299 37.507 1.181 -6.366 -0.742 -0.186 C04 QRH 4 QRH C05 C4 C 0 1 N N N -119.942 36.989 -0.057 -7.617 -0.090 -0.142 C05 QRH 5 QRH C06 C5 C 0 1 N N N -120.918 37.082 -0.955 -8.758 -0.817 -0.098 C06 QRH 6 QRH C07 C6 C 0 1 Y N N -121.131 36.141 -2.148 -10.060 -0.139 -0.051 C07 QRH 7 QRH C08 C7 C 0 1 Y N N -121.593 34.802 -2.012 -11.242 -0.888 -0.005 C08 QRH 8 QRH C09 C8 C 0 1 Y N N -121.759 33.959 -3.104 -12.462 -0.245 0.038 C09 QRH 9 QRH C11 C9 C 0 1 N N N -122.342 32.327 -4.601 -14.552 0.372 0.528 C11 QRH 10 QRH C13 C10 C 0 1 Y N N -121.462 34.404 -4.417 -12.518 1.150 0.037 C13 QRH 11 QRH C14 C11 C 0 1 Y N N -121.004 35.691 -4.589 -11.346 1.893 -0.008 C14 QRH 12 QRH C15 C12 C 0 1 Y N N -120.844 36.533 -3.462 -10.123 1.260 -0.047 C15 QRH 13 QRH C17 C13 C 0 1 N N N -119.777 40.296 3.444 -1.533 -0.620 -0.378 C17 QRH 14 QRH C18 C14 C 0 1 N N N -119.542 40.918 2.031 -0.415 0.423 -0.428 C18 QRH 15 QRH C19 C15 C 0 1 N N N -120.708 40.824 0.997 0.940 -0.284 -0.482 C19 QRH 16 QRH C20 C16 C 0 1 N N N -120.987 42.076 0.077 2.058 0.760 -0.532 C20 QRH 17 QRH C21 C17 C 0 1 N N N -121.014 43.533 0.770 3.414 0.053 -0.587 C21 QRH 18 QRH C22 C18 C 0 1 N N N -121.205 43.748 2.348 4.531 1.096 -0.637 C22 QRH 19 QRH C24 C19 C 0 1 Y N N -118.437 45.179 2.780 7.744 1.217 -1.032 C24 QRH 20 QRH C25 C20 C 0 1 Y N N -117.310 45.156 3.644 8.931 0.563 -1.303 C25 QRH 21 QRH C26 C21 C 0 1 Y N N -115.954 45.287 3.274 10.081 1.291 -1.546 C26 QRH 22 QRH C27 C22 C 0 1 Y N N -115.595 45.460 1.940 10.044 2.672 -1.516 C27 QRH 23 QRH C28 C23 C 0 1 Y N N -116.651 45.492 1.025 8.856 3.326 -1.245 C28 QRH 24 QRH C29 C24 C 0 1 Y N N -118.000 45.356 1.440 7.705 2.598 -1.009 C29 QRH 25 QRH C30 C25 C 0 1 Y N N -120.189 44.287 5.072 6.290 -1.617 -0.442 C30 QRH 26 QRH C31 C26 C 0 1 Y N N -119.264 43.317 5.547 7.501 -2.205 -0.127 C31 QRH 27 QRH C32 C27 C 0 1 Y N N -119.234 42.770 6.849 7.575 -3.571 0.072 C32 QRH 28 QRH C33 C28 C 0 1 Y N N -120.161 43.160 7.807 6.438 -4.349 -0.043 C33 QRH 29 QRH C34 C29 C 0 1 Y N N -121.100 44.112 7.401 5.227 -3.760 -0.357 C34 QRH 30 QRH C35 C30 C 0 1 Y N N -121.095 44.637 6.093 5.153 -2.395 -0.557 C35 QRH 31 QRH C36 C31 C 0 1 Y N N -121.119 46.562 3.228 6.404 0.504 1.134 C36 QRH 32 QRH C37 C32 C 0 1 Y N N -120.596 47.786 2.759 5.297 0.551 1.961 C37 QRH 33 QRH C38 C33 C 0 1 Y N N -121.321 48.989 2.632 5.457 0.752 3.319 C38 QRH 34 QRH C39 C34 C 0 1 Y N N -122.674 49.057 2.964 6.723 0.906 3.851 C39 QRH 35 QRH C40 C35 C 0 1 Y N N -123.256 47.877 3.423 7.831 0.859 3.024 C40 QRH 36 QRH C41 C36 C 0 1 Y N N -122.498 46.700 3.534 7.671 0.653 1.667 C41 QRH 37 QRH N16 N1 N 0 1 N N N -118.633 39.500 3.802 -2.831 0.057 -0.325 N16 QRH 38 QRH O10 O2 O 0 1 N N N -122.192 32.650 -3.213 -13.738 -0.731 0.087 O10 QRH 39 QRH O12 O3 O 0 1 N N N -121.708 33.391 -5.310 -13.826 1.533 0.084 O12 QRH 40 QRH P23 P1 P 0 1 N N N -120.208 44.986 3.382 6.188 0.232 -0.703 P23 QRH 41 QRH H1 H1 H 0 1 N N N -120.451 37.137 2.942 -5.269 1.066 -0.232 H1 QRH 42 QRH H2 H2 H 0 1 N N N -118.367 38.001 0.951 -6.320 -1.821 -0.185 H2 QRH 43 QRH H3 H3 H 0 1 N N N -119.337 36.151 -0.371 -7.663 0.989 -0.143 H3 QRH 44 QRH H4 H4 H 0 1 N N N -121.623 37.891 -0.834 -8.711 -1.896 -0.097 H4 QRH 45 QRH H5 H5 H 0 1 N N N -121.823 34.428 -1.025 -11.198 -1.967 -0.005 H5 QRH 46 QRH H6 H6 H 0 1 N N N -123.407 32.267 -4.869 -15.535 0.333 0.059 H6 QRH 47 QRH H7 H7 H 0 1 N N N -121.853 31.368 -4.828 -14.646 0.368 1.614 H7 QRH 48 QRH H8 H8 H 0 1 N N N -120.768 36.056 -5.578 -11.393 2.972 -0.009 H8 QRH 49 QRH H9 H9 H 0 1 N N N -120.479 37.536 -3.625 -9.214 1.842 -0.082 H9 QRH 50 QRH H10 H10 H 0 1 N N N -119.913 41.100 4.183 -1.486 -1.247 -1.268 H10 QRH 51 QRH H11 H11 H 0 1 N N N -120.675 39.662 3.423 -1.411 -1.241 0.510 H11 QRH 52 QRH H12 H12 H 0 1 N N N -118.670 40.413 1.590 -0.538 1.044 -1.315 H12 QRH 53 QRH H13 H13 H 0 1 N N N -119.315 41.985 2.175 -0.463 1.049 0.463 H13 QRH 54 QRH H14 H14 H 0 1 N N N -121.630 40.621 1.562 1.062 -0.905 0.405 H14 QRH 55 QRH H15 H15 H 0 1 N N N -120.489 39.974 0.334 0.988 -0.910 -1.373 H15 QRH 56 QRH H16 H16 H 0 1 N N N -121.967 41.921 -0.398 1.936 1.381 -1.420 H16 QRH 57 QRH H17 H17 H 0 1 N N N -120.204 42.095 -0.696 2.010 1.386 0.359 H17 QRH 58 QRH H18 H18 H 0 1 N N N -120.056 44.008 0.514 3.536 -0.568 0.301 H18 QRH 59 QRH H19 H19 H 0 1 N N N -121.836 44.082 0.288 3.461 -0.574 -1.477 H19 QRH 60 QRH H20 H20 H 0 1 N N N -122.260 44.028 2.484 4.410 1.717 -1.524 H20 QRH 61 QRH H21 H21 H 0 1 N N N -121.025 42.764 2.806 4.484 1.722 0.254 H21 QRH 62 QRH H22 H22 H 0 1 N N N -117.512 45.024 4.697 8.961 -0.516 -1.326 H22 QRH 63 QRH H23 H23 H 0 1 N N N -115.187 45.253 4.034 11.009 0.780 -1.757 H23 QRH 64 QRH H24 H24 H 0 1 N N N -114.565 45.563 1.632 10.942 3.241 -1.705 H24 QRH 65 QRH H25 H25 H 0 1 N N N -116.434 45.624 -0.025 8.826 4.405 -1.227 H25 QRH 66 QRH H26 H26 H 0 1 N N N -118.759 45.390 0.673 6.778 3.109 -0.797 H26 QRH 67 QRH H27 H27 H 0 1 N N N -118.517 42.967 4.850 8.389 -1.597 -0.038 H27 QRH 68 QRH H28 H28 H 0 1 N N N -118.481 42.039 7.103 8.521 -4.030 0.316 H28 QRH 69 QRH H29 H29 H 0 1 N N N -120.156 42.752 8.807 6.496 -5.416 0.112 H29 QRH 70 QRH H30 H30 H 0 1 N N N -121.845 44.453 8.104 4.339 -4.368 -0.447 H30 QRH 71 QRH H31 H31 H 0 1 N N N -121.850 45.370 5.853 4.207 -1.935 -0.802 H31 QRH 72 QRH H32 H32 H 0 1 N N N -119.554 47.803 2.474 4.308 0.430 1.545 H32 QRH 73 QRH H33 H33 H 0 1 N N N -120.819 49.874 2.271 4.592 0.789 3.965 H33 QRH 74 QRH H34 H34 H 0 1 N N N -123.239 49.973 2.871 6.848 1.064 4.912 H34 QRH 75 QRH H35 H35 H 0 1 N N N -124.301 47.868 3.696 8.820 0.980 3.440 H35 QRH 76 QRH H36 H36 H 0 1 N N N -123.012 45.818 3.885 8.536 0.612 1.022 H36 QRH 77 QRH H37 H37 H 0 1 N N N -117.932 39.907 4.388 -2.873 1.026 -0.326 H37 QRH 78 QRH H38 H38 H 0 1 N N N ? ? ? 6.019 0.018 -2.148 H38 QRH 79 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QRH O12 C11 SING N N 1 QRH O12 C13 SING N N 2 QRH C11 O10 SING N N 3 QRH C14 C13 DOUB Y N 4 QRH C14 C15 SING Y N 5 QRH C13 C09 SING Y N 6 QRH C15 C07 DOUB Y N 7 QRH O10 C09 SING N N 8 QRH C09 C08 DOUB Y N 9 QRH C07 C08 SING Y N 10 QRH C07 C06 SING N N 11 QRH C06 C05 DOUB N E 12 QRH C05 C04 SING N N 13 QRH C20 C21 SING N N 14 QRH C20 C19 SING N N 15 QRH C21 C22 SING N N 16 QRH C19 C18 SING N N 17 QRH C28 C29 DOUB Y N 18 QRH C28 C27 SING Y N 19 QRH C04 C03 DOUB N E 20 QRH C29 C24 SING Y N 21 QRH C27 C26 DOUB Y N 22 QRH C18 C17 SING N N 23 QRH C22 P23 SING N N 24 QRH C03 C02 SING N N 25 QRH C38 C37 DOUB Y N 26 QRH C38 C39 SING Y N 27 QRH C37 C36 SING Y N 28 QRH C24 P23 SING N N 29 QRH C24 C25 DOUB Y N 30 QRH C39 C40 DOUB Y N 31 QRH C36 P23 SING N N 32 QRH C36 C41 DOUB Y N 33 QRH C26 C25 SING Y N 34 QRH C02 O01 DOUB N N 35 QRH C02 N16 SING N N 36 QRH P23 C30 SING N N 37 QRH C40 C41 SING Y N 38 QRH C17 N16 SING N N 39 QRH C30 C31 DOUB Y N 40 QRH C30 C35 SING Y N 41 QRH C31 C32 SING Y N 42 QRH C35 C34 DOUB Y N 43 QRH C32 C33 DOUB Y N 44 QRH C34 C33 SING Y N 45 QRH C03 H1 SING N N 46 QRH C04 H2 SING N N 47 QRH C05 H3 SING N N 48 QRH C06 H4 SING N N 49 QRH C08 H5 SING N N 50 QRH C11 H6 SING N N 51 QRH C11 H7 SING N N 52 QRH C14 H8 SING N N 53 QRH C15 H9 SING N N 54 QRH C17 H10 SING N N 55 QRH C17 H11 SING N N 56 QRH C18 H12 SING N N 57 QRH C18 H13 SING N N 58 QRH C19 H14 SING N N 59 QRH C19 H15 SING N N 60 QRH C20 H16 SING N N 61 QRH C20 H17 SING N N 62 QRH C21 H18 SING N N 63 QRH C21 H19 SING N N 64 QRH C22 H20 SING N N 65 QRH C22 H21 SING N N 66 QRH C25 H22 SING N N 67 QRH C26 H23 SING N N 68 QRH C27 H24 SING N N 69 QRH C28 H25 SING N N 70 QRH C29 H26 SING N N 71 QRH C31 H27 SING N N 72 QRH C32 H28 SING N N 73 QRH C33 H29 SING N N 74 QRH C34 H30 SING N N 75 QRH C35 H31 SING N N 76 QRH C37 H32 SING N N 77 QRH C38 H33 SING N N 78 QRH C39 H34 SING N N 79 QRH C40 H35 SING N N 80 QRH C41 H36 SING N N 81 QRH N16 H37 SING N N 82 QRH P23 H38 SING N N 83 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QRH InChI InChI 1.03 "InChI=1S/C36H38NO3P/c38-36(23-13-12-16-30-24-25-34-35(28-30)40-29-39-34)37-26-14-1-2-15-27-41(31-17-6-3-7-18-31,32-19-8-4-9-20-32)33-21-10-5-11-22-33/h3-13,16-25,28,41H,1-2,14-15,26-27,29H2,(H,37,38)/b16-12+,23-13+" QRH InChIKey InChI 1.03 XYBUESNIYRZZQB-XSDFDVSCSA-N QRH SMILES_CANONICAL CACTVS 3.385 "O=C(NCCCCCC[PH](c1ccccc1)(c2ccccc2)c3ccccc3)/C=C/C=C/c4ccc5OCOc5c4" QRH SMILES CACTVS 3.385 "O=C(NCCCCCC[PH](c1ccccc1)(c2ccccc2)c3ccccc3)C=CC=Cc4ccc5OCOc5c4" QRH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)P(CCCCCCNC(=O)/C=C/C=C/c2ccc3c(c2)OCO3)(c4ccccc4)c5ccccc5" QRH SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)P(CCCCCCNC(=O)C=CC=Cc2ccc3c(c2)OCO3)(c4ccccc4)c5ccccc5" # _pdbx_chem_comp_identifier.comp_id QRH _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{E},4~{E})-5-(1,3-benzodioxol-5-yl)-~{N}-[6-(triphenyl-$l^{5}-phosphanyl)hexyl]penta-2,4-dienamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QRH "Create component" 2020-07-29 PDBE QRH "Initial release" 2021-06-09 RCSB ##