data_QRV # _chem_comp.id QRV _chem_comp.name "2-amino-9-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-7-{2-[(2-hydroxyethyl)(phenyl)amino]ethyl}-6-oxo-6,9-dihydro-1H-purin-7-ium" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H27 F N6 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2019-12-13 _chem_comp.pdbx_modified_date 2020-12-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 529.436 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QRV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6V5K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QRV C10 C1 C 0 1 Y N N 34.581 -49.979 -8.021 0.064 -0.570 -0.379 C10 QRV 1 QRV C13 C2 C 0 1 N N N 32.191 -49.441 -10.511 -2.634 1.231 0.246 C13 QRV 2 QRV C15 C3 C 0 1 Y N N 33.619 -48.869 -12.499 -4.918 1.998 -0.335 C15 QRV 3 QRV C17 C4 C 0 1 Y N N 33.330 -50.117 -14.559 -6.771 0.512 -0.005 C17 QRV 4 QRV C20 C5 C 0 1 Y N N 34.449 -47.997 -13.225 -5.786 2.970 -0.816 C20 QRV 5 QRV C21 C6 C 0 1 N N N 33.884 -47.566 -10.381 -3.024 3.556 -0.693 C21 QRV 6 QRV C22 C7 C 0 1 N N N 35.415 -47.535 -10.260 -3.010 4.520 0.495 C22 QRV 7 QRV C24 C8 C 0 1 N N R 36.653 -49.425 -6.672 2.024 -1.978 0.363 C24 QRV 8 QRV C26 C9 C 0 1 N N R 38.817 -49.501 -7.629 4.050 -0.986 -0.162 C26 QRV 9 QRV C28 C10 C 0 1 N N S 37.132 -50.861 -6.610 2.582 -2.776 -0.832 C28 QRV 10 QRV C01 C11 C 0 1 Y N N 33.142 -48.523 -7.336 -1.607 -1.862 0.108 C01 QRV 11 QRV C02 C12 C 0 1 Y N N 34.302 -48.331 -6.683 -0.438 -2.542 0.469 C02 QRV 12 QRV C04 C13 C 0 1 N N N 33.399 -46.531 -5.499 -1.686 -4.346 1.194 C04 QRV 13 QRV C06 C14 C 0 1 N N N 32.087 -47.729 -7.097 -2.853 -2.497 0.320 C06 QRV 14 QRV C12 C15 C 0 1 N N N 32.427 -50.241 -9.180 -2.147 0.361 -0.915 C12 QRV 15 QRV C16 C16 C 0 1 Y N N 33.056 -49.928 -13.206 -5.415 0.765 0.068 C16 QRV 16 QRV C18 C17 C 0 1 Y N N 34.162 -49.241 -15.250 -7.633 1.484 -0.479 C18 QRV 17 QRV C19 C18 C 0 1 Y N N 34.735 -48.167 -14.577 -7.140 2.710 -0.887 C19 QRV 18 QRV C27 C19 C 0 1 N N R 38.641 -50.591 -6.562 3.724 -1.887 -1.381 C27 QRV 19 QRV C31 C20 C 0 1 N N N 39.139 -50.006 -9.063 4.693 0.325 -0.617 C31 QRV 20 QRV F29 F1 F 0 1 N N N 36.825 -51.480 -7.705 1.593 -2.957 -1.805 F29 QRV 21 QRV N03 N1 N 0 1 N N N 34.422 -47.350 -5.777 -0.521 -3.766 1.002 N03 QRV 22 QRV N05 N2 N 0 1 N N N 32.198 -46.710 -6.162 -2.858 -3.735 0.863 N05 QRV 23 QRV N08 N3 N 0 1 N N N 33.531 -45.561 -4.594 -1.721 -5.603 1.743 N08 QRV 24 QRV N09 N4 N 0 1 Y N N 35.195 -49.243 -7.094 0.599 -1.705 0.157 N09 QRV 25 QRV N11 N5 N 1 1 Y N N 33.327 -49.554 -8.173 -1.233 -0.665 -0.407 N11 QRV 26 QRV N14 N6 N 0 1 N N N 33.323 -48.694 -11.172 -3.547 2.257 -0.262 N14 QRV 27 QRV O07 O1 O 0 1 N N N 31.006 -47.867 -7.675 -3.896 -1.941 0.021 O07 QRV 28 QRV O23 O2 O 0 1 N N N 35.851 -46.446 -11.064 -2.088 4.049 1.480 O23 QRV 29 QRV O25 O3 O 0 1 N N N 37.492 -48.879 -7.731 2.756 -0.743 0.432 O25 QRV 30 QRV O30 O4 O 0 1 N N N 38.959 -50.050 -5.275 4.856 -2.679 -1.746 O30 QRV 31 QRV O32 O5 O 0 1 N N N 39.170 -51.455 -9.183 5.088 1.084 0.527 O32 QRV 32 QRV OP3 O6 O 0 1 N N N 37.417 -51.352 -11.091 5.983 3.143 1.896 OP3 QRV 33 QRV OP1 O7 O 0 1 N N N 37.563 -53.447 -9.578 7.242 2.360 -0.275 OP1 QRV 34 QRV P33 P1 P 0 1 N N N 38.222 -52.307 -10.272 5.800 2.524 0.421 P33 QRV 35 QRV H1 H1 H 0 1 N N N 35.031 -50.795 -8.566 0.632 0.281 -0.725 H1 QRV 36 QRV H2 H2 H 0 1 N N N 31.408 -48.699 -10.297 -3.155 0.608 0.973 H2 QRV 37 QRV H3 H3 H 0 1 N N N 31.818 -50.165 -11.251 -1.779 1.710 0.725 H3 QRV 38 QRV H4 H4 H 0 1 N N N 32.890 -50.955 -15.079 -7.159 -0.446 0.308 H4 QRV 39 QRV H5 H5 H 0 1 N N N 34.886 -47.155 -12.709 -5.402 3.928 -1.134 H5 QRV 40 QRV H6 H6 H 0 1 N N N 33.563 -46.627 -10.856 -3.658 3.960 -1.481 H6 QRV 41 QRV H7 H7 H 0 1 N N N 33.466 -47.624 -9.365 -2.009 3.431 -1.071 H7 QRV 42 QRV H8 H8 H 0 1 N N N 35.846 -48.478 -10.627 -2.705 5.510 0.156 H8 QRV 43 QRV H9 H9 H 0 1 N N N 35.712 -47.379 -9.212 -4.008 4.576 0.929 H9 QRV 44 QRV H10 H10 H 0 1 N N N 36.838 -48.917 -5.714 2.164 -2.544 1.284 H10 QRV 45 QRV H11 H11 H 0 1 N N N 39.576 -48.772 -7.307 4.701 -1.509 0.538 H11 QRV 46 QRV H12 H12 H 0 1 N N N 36.792 -51.353 -5.687 2.973 -3.737 -0.500 H12 QRV 47 QRV H13 H13 H 0 1 N N N 31.449 -50.410 -8.705 -3.002 -0.117 -1.393 H13 QRV 48 QRV H14 H14 H 0 1 N N N 32.881 -51.209 -9.439 -1.626 0.984 -1.642 H14 QRV 49 QRV H15 H15 H 0 1 N N N 32.396 -50.615 -12.697 -4.743 0.005 0.439 H15 QRV 50 QRV H16 H16 H 0 1 N N N 34.361 -49.394 -16.300 -8.693 1.283 -0.536 H16 QRV 51 QRV H17 H17 H 0 1 N N N 35.388 -47.479 -15.093 -7.816 3.467 -1.257 H17 QRV 52 QRV H18 H18 H 0 1 N N N 39.221 -51.493 -6.807 3.381 -1.289 -2.226 H18 QRV 53 QRV H19 H19 H 0 1 N N N 40.124 -49.613 -9.356 5.568 0.108 -1.229 H19 QRV 54 QRV H20 H20 H 0 1 N N N 38.371 -49.618 -9.748 3.974 0.898 -1.203 H20 QRV 55 QRV H21 H21 H 0 1 N N N 31.420 -46.112 -5.970 -3.700 -4.190 1.018 H21 QRV 56 QRV H22 H22 H 0 1 N N N 34.400 -45.439 -4.115 -0.895 -6.051 1.984 H22 QRV 57 QRV H23 H23 H 0 1 N N N 32.761 -44.955 -4.394 -2.573 -6.044 1.891 H23 QRV 58 QRV H24 H24 H 0 1 N N N 36.798 -46.382 -11.024 -2.027 4.613 2.263 H24 QRV 59 QRV H25 H25 H 0 1 N N N 38.851 -50.723 -4.613 4.702 -3.259 -2.504 H25 QRV 60 QRV H26 H26 H 0 1 N N N 37.235 -51.738 -11.940 6.406 4.012 1.909 H26 QRV 61 QRV H27 H27 H 0 1 N N N 37.355 -54.125 -10.210 7.846 1.777 0.206 H27 QRV 62 QRV O1 O8 O 0 1 N N N 38.057 -53.145 -11.580 4.960 3.431 -0.393 O1 QRV 63 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QRV C18 C19 DOUB Y N 1 QRV C18 C17 SING Y N 2 QRV C19 C20 SING Y N 3 QRV C17 C16 DOUB Y N 4 QRV C20 C15 DOUB Y N 5 QRV C16 C15 SING Y N 6 QRV C15 N14 SING N N 7 QRV N14 C13 SING N N 8 QRV N14 C21 SING N N 9 QRV OP3 P33 SING N N 10 QRV O23 C22 SING N N 11 QRV C13 C12 SING N N 12 QRV C21 C22 SING N N 13 QRV P33 OP1 SING N N 14 QRV P33 O32 SING N N 15 QRV O32 C31 SING N N 16 QRV C12 N11 SING N N 17 QRV C31 C26 SING N N 18 QRV N11 C10 DOUB Y N 19 QRV N11 C01 SING Y N 20 QRV C10 N09 SING Y N 21 QRV O25 C26 SING N N 22 QRV O25 C24 SING N N 23 QRV F29 C28 SING N N 24 QRV O07 C06 DOUB N N 25 QRV C26 C27 SING N N 26 QRV C01 C06 SING N N 27 QRV C01 C02 DOUB Y N 28 QRV C06 N05 SING N N 29 QRV N09 C02 SING Y N 30 QRV N09 C24 SING N N 31 QRV C02 N03 SING N N 32 QRV C24 C28 SING N N 33 QRV C28 C27 SING N N 34 QRV C27 O30 SING N N 35 QRV N05 C04 SING N N 36 QRV N03 C04 DOUB N N 37 QRV C04 N08 SING N N 38 QRV C10 H1 SING N N 39 QRV C13 H2 SING N N 40 QRV C13 H3 SING N N 41 QRV C17 H4 SING N N 42 QRV C20 H5 SING N N 43 QRV C21 H6 SING N N 44 QRV C21 H7 SING N N 45 QRV C22 H8 SING N N 46 QRV C22 H9 SING N N 47 QRV C24 H10 SING N N 48 QRV C26 H11 SING N N 49 QRV C28 H12 SING N N 50 QRV C12 H13 SING N N 51 QRV C12 H14 SING N N 52 QRV C16 H15 SING N N 53 QRV C18 H16 SING N N 54 QRV C19 H17 SING N N 55 QRV C27 H18 SING N N 56 QRV C31 H19 SING N N 57 QRV C31 H20 SING N N 58 QRV N05 H21 SING N N 59 QRV N08 H22 SING N N 60 QRV N08 H23 SING N N 61 QRV O23 H24 SING N N 62 QRV O30 H25 SING N N 63 QRV OP3 H26 SING N N 64 QRV OP1 H27 SING N N 65 QRV P33 O1 DOUB N N 66 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QRV SMILES ACDLabs 12.01 "c3n(C1C(C(C(COP(O)(O)=O)O1)O)F)c2c(C(NC(N)=N2)=O)[n+]3CCN(c4ccccc4)CCO" QRV InChI InChI 1.03 "InChI=1S/C20H26FN6O8P/c21-14-16(29)13(10-34-36(31,32)33)35-19(14)27-11-26(15-17(27)23-20(22)24-18(15)30)7-6-25(8-9-28)12-4-2-1-3-5-12/h1-5,11,13-14,16,19,28-29H,6-10H2,(H4-,22,23,24,30,31,32,33)/p+1/t13-,14+,16-,19-/m1/s1" QRV InChIKey InChI 1.03 CYGUEJJPPJBMNJ-QHHYFVSCSA-O QRV SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(c[n+](CCN(CCO)c3ccccc3)c2C(=O)N1)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]4F" QRV SMILES CACTVS 3.385 "NC1=Nc2n(c[n+](CCN(CCO)c3ccccc3)c2C(=O)N1)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4F" QRV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N(CC[n+]2cn(c3c2C(=O)NC(=N3)N)[C@H]4[C@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)F)CCO" QRV SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N(CC[n+]2cn(c3c2C(=O)NC(=N3)N)C4C(C(C(O4)COP(=O)(O)O)O)F)CCO" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier QRV "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-9-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-7-{2-[(2-hydroxyethyl)(phenyl)amino]ethyl}-6-oxo-6,9-dihydro-1H-purin-7-ium" QRV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{R},4~{S},5~{R})-5-[2-azanyl-7-[2-[2-hydroxyethyl(phenyl)amino]ethyl]-6-oxidanylidene-1~{H}-purin-7-ium-9-yl]-4-fluoranyl-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QRV "Create component" 2019-12-13 RCSB QRV "Other modification" 2020-01-09 RCSB QRV "Initial release" 2020-12-09 RCSB ##