data_QVZ
#
_chem_comp.id QVZ
_chem_comp.name "3-((9,9-dimethyl-9H-fluoren-2-yl)methyl)-2-oxoglutarate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H20 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-08-14
_chem_comp.pdbx_modified_date 2021-08-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 352.381
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code QVZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7A1K
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QVZ C10 C1 C 0 1 Y N N 19.155 24.542 32.011 -0.367 1.258 0.675 C10 QVZ 1
QVZ C13 C2 C 0 1 N N N 18.316 25.041 34.419 -2.813 1.574 -0.266 C13 QVZ 2
QVZ C15 C3 C 0 1 Y N N 21.134 25.695 37.550 -5.623 -1.619 -0.167 C15 QVZ 3
QVZ C17 C4 C 0 1 Y N N 18.802 25.579 36.905 -5.234 0.661 -0.795 C17 QVZ 4
QVZ C20 C5 C 0 1 N N N 22.295 25.356 28.272 2.047 -1.623 -0.797 C20 QVZ 5
QVZ C21 C6 C 0 1 N N N 17.386 25.351 28.788 5.095 0.941 -0.515 C21 QVZ 6
QVZ C01 C7 C 0 1 N N N 21.182 25.882 28.818 2.929 -0.958 0.205 C01 QVZ 7
QVZ C02 C8 C 0 1 N N S 19.887 25.107 28.762 2.836 0.530 0.421 C02 QVZ 8
QVZ C03 C9 C 0 1 N N N 19.978 24.025 29.702 1.914 0.816 1.608 C03 QVZ 9
QVZ C04 C10 C 0 1 N N N 18.719 25.995 29.130 4.229 1.092 0.710 C04 QVZ 10
QVZ C05 C11 C 0 1 Y N N 20.231 24.353 31.150 0.513 0.373 1.274 C05 QVZ 11
QVZ C06 C12 C 0 1 Y N N 21.521 24.445 31.660 0.108 -0.916 1.568 C06 QVZ 12
QVZ C07 C13 C 0 1 Y N N 21.729 24.731 33.022 -1.173 -1.328 1.266 C07 QVZ 13
QVZ C08 C14 C 0 1 Y N N 20.630 24.924 33.886 -2.066 -0.442 0.661 C08 QVZ 14
QVZ C09 C15 C 0 1 Y N N 19.369 24.822 33.360 -1.649 0.854 0.370 C09 QVZ 15
QVZ C11 C16 C 0 1 Y N N 20.541 25.212 35.251 -3.477 -0.615 0.235 C11 QVZ 16
QVZ C12 C17 C 0 1 Y N N 19.202 25.300 35.606 -3.941 0.573 -0.323 C12 QVZ 17
QVZ C14 C18 C 0 1 Y N N 21.528 25.413 36.239 -4.332 -1.716 0.310 C14 QVZ 18
QVZ C16 C19 C 0 1 Y N N 19.777 25.777 37.880 -6.075 -0.435 -0.719 C16 QVZ 19
QVZ C18 C20 C 0 1 N N N 17.400 26.131 34.098 -3.223 2.781 0.581 C18 QVZ 20
QVZ C19 C21 C 0 1 N N N 17.359 23.792 34.636 -2.437 2.026 -1.678 C19 QVZ 21
QVZ O01 O1 O 0 1 N N N 21.224 26.974 29.350 3.719 -1.613 0.842 O01 QVZ 22
QVZ O02 O2 O 0 1 N N N 23.364 25.893 28.380 2.179 -2.940 -1.041 O02 QVZ 23
QVZ O03 O3 O 0 1 N N N 22.210 24.219 27.575 1.210 -0.977 -1.391 O03 QVZ 24
QVZ O04 O4 O 0 1 N N N 17.252 24.685 27.789 4.615 0.541 -1.549 O04 QVZ 25
QVZ O05 O5 O 0 1 N N N 16.326 25.555 29.565 6.400 1.252 -0.456 O05 QVZ 26
QVZ H08 H1 H 0 1 N N N 18.146 24.471 31.632 -0.050 2.266 0.451 H08 QVZ 27
QVZ H10 H2 H 0 1 N N N 21.882 25.851 38.313 -6.282 -2.473 -0.110 H10 QVZ 28
QVZ H12 H3 H 0 1 N N N 17.753 25.642 37.156 -5.589 1.585 -1.227 H12 QVZ 29
QVZ H01 H4 H 0 1 N N N 19.740 24.718 27.744 2.432 1.003 -0.475 H01 QVZ 30
QVZ H02 H5 H 0 1 N N N 19.028 23.473 29.655 2.269 0.271 2.483 H02 QVZ 31
QVZ H03 H6 H 0 1 N N N 20.798 23.373 29.368 1.917 1.885 1.820 H03 QVZ 32
QVZ H04 H7 H 0 1 N N N 18.751 26.194 30.211 4.676 0.545 1.540 H04 QVZ 33
QVZ H05 H8 H 0 1 N N N 18.807 26.944 28.580 4.149 2.147 0.970 H05 QVZ 34
QVZ H06 H9 H 0 1 N N N 22.368 24.296 31.007 0.798 -1.603 2.035 H06 QVZ 35
QVZ H07 H10 H 0 1 N N N 22.735 24.803 33.408 -1.485 -2.336 1.496 H07 QVZ 36
QVZ H09 H11 H 0 1 N N N 22.576 25.350 35.985 -3.983 -2.642 0.741 H09 QVZ 37
QVZ H11 H12 H 0 1 N N N 19.484 25.995 38.896 -7.086 -0.365 -1.092 H11 QVZ 38
QVZ H14 H13 H 0 1 N N N 16.660 26.239 34.905 -4.073 3.280 0.116 H14 QVZ 39
QVZ H13 H14 H 0 1 N N N 17.967 27.068 33.993 -3.500 2.446 1.581 H13 QVZ 40
QVZ H15 H15 H 0 1 N N N 16.882 25.908 33.154 -2.387 3.477 0.650 H15 QVZ 41
QVZ H18 H16 H 0 1 N N N 16.622 24.026 35.419 -3.294 2.512 -2.145 H18 QVZ 42
QVZ H16 H17 H 0 1 N N N 16.835 23.564 33.696 -1.605 2.728 -1.626 H16 QVZ 43
QVZ H17 H18 H 0 1 N N N 17.957 22.921 34.944 -2.144 1.159 -2.271 H17 QVZ 44
QVZ H1 H19 H 0 1 N N N 24.022 25.385 27.919 1.585 -3.326 -1.699 H1 QVZ 45
QVZ H2 H20 H 0 1 N N N 15.570 25.116 29.192 6.915 1.139 -1.267 H2 QVZ 46
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QVZ O03 C20 DOUB N N 1
QVZ O04 C21 DOUB N N 2
QVZ C20 O02 SING N N 3
QVZ C20 C01 SING N N 4
QVZ C02 C01 SING N N 5
QVZ C02 C04 SING N N 6
QVZ C02 C03 SING N N 7
QVZ C21 C04 SING N N 8
QVZ C21 O05 SING N N 9
QVZ C01 O01 DOUB N N 10
QVZ C03 C05 SING N N 11
QVZ C05 C06 DOUB Y N 12
QVZ C05 C10 SING Y N 13
QVZ C06 C07 SING Y N 14
QVZ C10 C09 DOUB Y N 15
QVZ C07 C08 DOUB Y N 16
QVZ C09 C08 SING Y N 17
QVZ C09 C13 SING N N 18
QVZ C08 C11 SING N N 19
QVZ C18 C13 SING N N 20
QVZ C13 C19 SING N N 21
QVZ C13 C12 SING N N 22
QVZ C11 C12 DOUB Y N 23
QVZ C11 C14 SING Y N 24
QVZ C12 C17 SING Y N 25
QVZ C14 C15 DOUB Y N 26
QVZ C17 C16 DOUB Y N 27
QVZ C15 C16 SING Y N 28
QVZ C10 H08 SING N N 29
QVZ C15 H10 SING N N 30
QVZ C17 H12 SING N N 31
QVZ C02 H01 SING N N 32
QVZ C03 H02 SING N N 33
QVZ C03 H03 SING N N 34
QVZ C04 H04 SING N N 35
QVZ C04 H05 SING N N 36
QVZ C06 H06 SING N N 37
QVZ C07 H07 SING N N 38
QVZ C14 H09 SING N N 39
QVZ C16 H11 SING N N 40
QVZ C18 H14 SING N N 41
QVZ C18 H13 SING N N 42
QVZ C18 H15 SING N N 43
QVZ C19 H18 SING N N 44
QVZ C19 H16 SING N N 45
QVZ C19 H17 SING N N 46
QVZ O02 H1 SING N N 47
QVZ O05 H2 SING N N 48
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QVZ InChI InChI 1.03 "InChI=1S/C21H20O5/c1-21(2)16-6-4-3-5-14(16)15-8-7-12(10-17(15)21)9-13(11-18(22)23)19(24)20(25)26/h3-8,10,13H,9,11H2,1-2H3,(H,22,23)(H,25,26)/t13-/m0/s1"
QVZ InChIKey InChI 1.03 VBQHCGIHMLAMOB-ZDUSSCGKSA-N
QVZ SMILES_CANONICAL CACTVS 3.385 "CC1(C)c2ccccc2c3ccc(C[C@@H](CC(O)=O)C(=O)C(O)=O)cc13"
QVZ SMILES CACTVS 3.385 "CC1(C)c2ccccc2c3ccc(C[CH](CC(O)=O)C(=O)C(O)=O)cc13"
QVZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2-c3c1cc(cc3)C[C@@H](CC(=O)O)C(=O)C(=O)O)C"
QVZ SMILES "OpenEye OEToolkits" 2.0.7 "CC1(c2ccccc2-c3c1cc(cc3)CC(CC(=O)O)C(=O)C(=O)O)C"
#
_pdbx_chem_comp_identifier.comp_id QVZ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id QVZ
_pdbx_chem_comp_synonyms.name "(3~{S})-3-[(9,9-dimethylfluoren-2-yl)methyl]-2-oxidanylidene-pentanedioic acid"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QVZ "Create component" 2020-08-14 PDBE
QVZ "Modify synonyms" 2021-03-13 RCSB
QVZ "Initial release" 2021-08-25 RCSB
##