data_QYD # _chem_comp.id QYD _chem_comp.name "N-(4-NITROPHENYL)-2-PHENYL-THIOMORPHOLINE-4-CARBOXAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H17 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-08 _chem_comp.pdbx_modified_date 2015-05-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 343.400 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QYD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5ALP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QYD C1 C1 C 0 1 Y N N 11.878 -8.743 -22.498 5.538 -3.014 0.043 C1 QYD 1 QYD C2 C2 C 0 1 Y N N 12.939 -9.475 -22.995 4.639 -3.020 -1.007 C2 QYD 2 QYD C3 C3 C 0 1 Y N N 13.668 -10.284 -22.138 3.753 -1.971 -1.164 C3 QYD 3 QYD C4 C4 C 0 1 Y N N 13.352 -10.360 -20.805 3.766 -0.916 -0.272 C4 QYD 4 QYD C5 C5 C 0 1 Y N N 12.290 -9.631 -20.332 4.664 -0.910 0.779 C5 QYD 5 QYD C6 C6 C 0 1 Y N N 11.537 -8.807 -21.150 5.551 -1.959 0.935 C6 QYD 6 QYD C7 C7 C 0 1 N N S 14.164 -11.250 -19.937 2.800 0.228 -0.444 C7 QYD 7 QYD C8 C8 C 0 1 N N N 14.624 -10.533 -18.691 1.912 0.343 0.800 C8 QYD 8 QYD N9 N9 N 0 1 N N N 15.354 -11.376 -17.744 1.017 1.492 0.656 N9 QYD 9 QYD C10 C10 C 0 1 N N N 15.530 -12.771 -18.085 1.551 2.853 0.604 C10 QYD 10 QYD C11 C11 C 0 1 N N N 14.249 -13.544 -18.195 2.398 3.022 -0.661 C11 QYD 11 QYD S12 S12 S 0 1 N N N 13.229 -12.736 -19.476 3.725 1.780 -0.648 S12 QYD 12 QYD C13 C13 C 0 1 N N N 16.152 -10.760 -16.792 -0.314 1.293 0.571 C13 QYD 13 QYD O14 O14 O 0 1 N N N 16.621 -9.648 -17.017 -1.070 2.245 0.549 O14 QYD 14 QYD N15 N15 N 0 1 N N N 16.332 -11.441 -15.601 -0.806 0.040 0.510 N15 QYD 15 QYD C16 C16 C 0 1 Y N N 17.282 -11.001 -14.665 -2.176 -0.164 0.309 C16 QYD 16 QYD C17 C17 C 0 1 Y N N 18.171 -11.915 -14.161 -2.809 -1.254 0.893 C17 QYD 17 QYD C18 C18 C 0 1 Y N N 19.090 -11.509 -13.207 -4.161 -1.453 0.693 C18 QYD 18 QYD C19 C19 C 0 1 Y N N 19.073 -10.188 -12.816 -4.884 -0.569 -0.086 C19 QYD 19 QYD C20 C20 C 0 1 Y N N 18.168 -9.268 -13.295 -4.256 0.517 -0.669 C20 QYD 20 QYD C21 C21 C 0 1 Y N N 17.245 -9.695 -14.238 -2.905 0.725 -0.469 C21 QYD 21 QYD N22 N22 N 1 1 N N N 20.040 -9.748 -11.827 -6.333 -0.785 -0.298 N22 QYD 22 QYD O23 O23 O -1 1 N N N 20.799 -10.630 -11.390 -6.887 -1.742 0.214 O23 QYD 23 QYD O24 O24 O 0 1 N N N 19.979 -8.567 -11.462 -6.971 -0.007 -0.985 O24 QYD 24 QYD H1 H1 H 0 1 N N N 11.306 -8.113 -23.164 6.228 -3.836 0.168 H1 QYD 25 QYD H2 H2 H 0 1 N N N 13.198 -9.417 -24.042 4.629 -3.845 -1.704 H2 QYD 26 QYD H6 H6 H 0 1 N N N 10.712 -8.233 -20.755 6.254 -1.954 1.756 H6 QYD 27 QYD H3 H3 H 0 1 N N N 14.495 -10.862 -22.524 3.051 -1.976 -1.985 H3 QYD 28 QYD H5 H5 H 0 1 N N N 12.033 -9.703 -19.285 4.675 -0.085 1.476 H5 QYD 29 QYD H7 H7 H 0 1 N N N 15.042 -11.607 -20.495 2.179 0.053 -1.322 H7 QYD 30 QYD H81C H81C H 0 0 N N N 15.282 -9.705 -18.993 1.321 -0.567 0.909 H81C QYD 31 QYD H82C H82C H 0 0 N N N 13.738 -10.129 -18.180 2.538 0.477 1.682 H82C QYD 32 QYD H101 H101 H 0 0 N N N 16.050 -12.827 -19.052 0.727 3.566 0.587 H101 QYD 33 QYD H102 H102 H 0 0 N N N 16.150 -13.240 -17.307 2.170 3.035 1.483 H102 QYD 34 QYD H111 H111 H 0 0 N N N 14.461 -14.584 -18.485 1.773 2.879 -1.542 H111 QYD 35 QYD H112 H112 H 0 0 N N N 13.720 -13.533 -17.231 2.834 4.021 -0.679 H112 QYD 36 QYD H15 H15 H 0 1 N N N 15.781 -12.253 -15.405 -0.211 -0.720 0.604 H15 QYD 37 QYD H17 H17 H 0 1 N N N 18.155 -12.939 -14.504 -2.245 -1.945 1.501 H17 QYD 38 QYD H21 H21 H 0 1 N N N 16.508 -9.011 -14.631 -2.417 1.575 -0.920 H21 QYD 39 QYD H18 H18 H 0 1 N N N 19.798 -12.206 -12.783 -4.654 -2.300 1.146 H18 QYD 40 QYD H20 H20 H 0 1 N N N 18.176 -8.246 -12.947 -4.824 1.206 -1.277 H20 QYD 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QYD C1 C2 SING Y N 1 QYD C1 C6 DOUB Y N 2 QYD C2 C3 DOUB Y N 3 QYD C3 C4 SING Y N 4 QYD C4 C5 DOUB Y N 5 QYD C4 C7 SING N N 6 QYD C5 C6 SING Y N 7 QYD C7 C8 SING N N 8 QYD C7 S12 SING N N 9 QYD C8 N9 SING N N 10 QYD N9 C10 SING N N 11 QYD N9 C13 SING N N 12 QYD C10 C11 SING N N 13 QYD C11 S12 SING N N 14 QYD C13 O14 DOUB N N 15 QYD C13 N15 SING N N 16 QYD N15 C16 SING N N 17 QYD C16 C17 SING Y N 18 QYD C16 C21 DOUB Y N 19 QYD C17 C18 DOUB Y N 20 QYD C18 C19 SING Y N 21 QYD C19 C20 DOUB Y N 22 QYD C19 N22 SING N N 23 QYD C20 C21 SING Y N 24 QYD N22 O23 SING N N 25 QYD N22 O24 DOUB N N 26 QYD C1 H1 SING N N 27 QYD C2 H2 SING N N 28 QYD C6 H6 SING N N 29 QYD C3 H3 SING N N 30 QYD C5 H5 SING N N 31 QYD C7 H7 SING N N 32 QYD C8 H81C SING N N 33 QYD C8 H82C SING N N 34 QYD C10 H101 SING N N 35 QYD C10 H102 SING N N 36 QYD C11 H111 SING N N 37 QYD C11 H112 SING N N 38 QYD N15 H15 SING N N 39 QYD C17 H17 SING N N 40 QYD C21 H21 SING N N 41 QYD C18 H18 SING N N 42 QYD C20 H20 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QYD InChI InChI 1.03 "InChI=1S/C17H17N3O3S/c21-17(18-14-6-8-15(9-7-14)20(22)23)19-10-11-24-16(12-19)13-4-2-1-3-5-13/h1-9,16H,10-12H2,(H,18,21)/t16-/m1/s1" QYD InChIKey InChI 1.03 PNYRURHCCDDZLP-MRXNPFEDSA-N QYD SMILES_CANONICAL CACTVS 3.385 "[O-][N+](=O)c1ccc(NC(=O)N2CCS[C@H](C2)c3ccccc3)cc1" QYD SMILES CACTVS 3.385 "[O-][N+](=O)c1ccc(NC(=O)N2CCS[CH](C2)c3ccccc3)cc1" QYD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)[C@H]2CN(CCS2)C(=O)Nc3ccc(cc3)[N+](=O)[O-]" QYD SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C2CN(CCS2)C(=O)Nc3ccc(cc3)[N+](=O)[O-]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier QYD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-N-(4-nitrophenyl)-2-phenyl-thiomorpholine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QYD "Create component" 2015-03-08 EBI QYD "Initial release" 2015-05-13 RCSB #