data_R1J # _chem_comp.id R1J _chem_comp.name "(2R)-4-(ethenylsulfonyl)-1-{[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}-2-{[(prop-2-yn-1-yl)oxy]methyl}piperazine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 F4 N2 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-01-23 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 436.421 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R1J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6VKW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R1J C02 C1 C 0 1 Y N N N N N 12.937 19.951 0.697 3.240 -1.313 0.372 C02 R1J 1 R1J C03 C2 C 0 1 Y N N N N N 13.411 19.711 -0.574 2.004 -1.578 -0.190 C03 R1J 2 R1J C04 C3 C 0 1 Y N N N N N 14.560 18.960 -0.756 1.420 -0.659 -1.043 C04 R1J 3 R1J C05 C4 C 0 1 N N N N N N 15.089 18.693 -2.153 0.074 -0.950 -1.654 C05 R1J 4 R1J C07 C5 C 0 1 N N N N N N 13.969 16.478 -2.072 -0.885 1.021 -0.625 C07 R1J 5 R1J C08 C6 C 0 1 N N N N N N 14.217 14.999 -2.382 -1.885 1.493 0.436 C08 R1J 6 R1J C10 C7 C 0 1 N N N N N N 15.842 15.634 -4.222 -3.372 -0.437 -0.225 C10 R1J 7 R1J C11 C8 C 0 1 N N R N N N 15.441 17.083 -3.989 -2.312 -0.833 -1.260 C11 R1J 8 R1J C12 C9 C 0 1 N N N N N N 16.464 18.093 -4.532 -2.348 -2.348 -1.472 C12 R1J 9 R1J C14 C10 C 0 1 N N N N N N 18.377 18.202 -6.005 -2.170 -4.435 -0.307 C14 R1J 10 R1J C15 C11 C 0 1 N N N N N N 17.692 19.380 -6.539 -1.962 -5.011 1.031 C15 R1J 11 R1J C16 C12 C 0 1 N N N N N N 17.157 20.333 -7.002 -1.797 -5.470 2.099 C16 R1J 12 R1J C20 C13 C 0 1 N N N N N N 15.091 12.351 -4.554 -5.256 2.040 1.603 C20 R1J 13 R1J C21 C14 C 0 1 N N N N N N 14.688 11.114 -4.690 -5.256 3.142 2.311 C21 R1J 14 R1J C22 C15 C 0 1 Y N N N N N 15.238 18.469 0.352 2.070 0.526 -1.336 C22 R1J 15 R1J C23 C16 C 0 1 Y N N N N N 14.757 18.713 1.622 3.305 0.796 -0.778 C23 R1J 16 R1J C24 C17 C 0 1 Y N N N N N 13.611 19.452 1.793 3.891 -0.120 0.082 C24 R1J 17 R1J C26 C18 C 0 1 N N N N N N 13.821 20.518 3.960 5.714 1.391 0.294 C26 R1J 18 R1J F01 F1 F 0 1 N N N N N N 11.804 20.679 0.859 3.810 -2.210 1.205 F01 R1J 19 R1J F27 F2 F 0 1 N N N N N N 13.071 20.810 5.034 5.913 1.448 -1.089 F27 R1J 20 R1J F28 F3 F 0 1 N N N N N N 14.166 21.683 3.426 6.946 1.502 0.948 F28 R1J 21 R1J F29 F4 F 0 1 N N N N N N 14.953 19.963 4.408 4.881 2.444 0.689 F29 R1J 22 R1J N06 N1 N 0 1 N N N N N N 15.104 17.282 -2.568 -0.984 -0.437 -0.774 N06 R1J 23 R1J N09 N2 N 0 1 N N N N N N 14.631 14.895 -3.803 -3.220 0.996 0.073 N09 R1J 24 R1J O13 O1 O 0 1 N N N N N N 17.429 17.368 -5.314 -2.154 -3.009 -0.220 O13 R1J 25 R1J O18 O2 O 0 1 N N N N N N 12.543 13.264 -4.141 -5.464 1.411 -0.867 O18 R1J 26 R1J O19 O3 O 0 1 N N N N N N 13.867 14.247 -6.270 -3.992 3.322 -0.212 O19 R1J 27 R1J O25 O4 O 0 1 N N N N N N 13.126 19.721 3.092 5.103 0.146 0.637 O25 R1J 28 R1J S17 S1 S 0 1 N N N N N N 13.915 13.685 -4.786 -4.519 2.020 0.003 S17 R1J 29 R1J H1 H1 H 0 1 N N N N N N 12.886 20.109 -1.430 1.495 -2.502 0.037 H1 R1J 30 R1J H2 H2 H 0 1 N N N N N N 16.121 19.071 -2.202 0.004 -0.464 -2.627 H2 R1J 31 R1J H3 H3 H 0 1 N N N N N N 14.461 19.248 -2.865 -0.045 -2.026 -1.776 H3 R1J 32 R1J H4 H4 H 0 1 N N N N N N 13.871 16.613 -0.985 -1.112 1.500 -1.578 H4 R1J 33 R1J H5 H5 H 0 1 N N N N N N 13.043 16.806 -2.567 0.126 1.287 -0.316 H5 R1J 34 R1J H6 H6 H 0 1 N N N N N N 13.294 14.423 -2.218 -1.598 1.098 1.410 H6 R1J 35 R1J H7 H7 H 0 1 N N N N N N 15.013 14.609 -1.731 -1.894 2.583 0.471 H7 R1J 36 R1J H8 H8 H 0 1 N N N N N N 16.073 15.451 -5.282 -4.367 -0.624 -0.629 H8 R1J 37 R1J H9 H9 H 0 1 N N N N N N 16.710 15.358 -3.605 -3.228 -1.017 0.686 H9 R1J 38 R1J H10 H10 H 0 1 N N N N N N 14.516 17.245 -4.563 -2.519 -0.329 -2.204 H10 R1J 39 R1J H11 H11 H 0 1 N N N N N N 16.967 18.602 -3.696 -3.314 -2.634 -1.889 H11 R1J 40 R1J H12 H12 H 0 1 N N N N N N 15.956 18.838 -5.162 -1.555 -2.637 -2.162 H12 R1J 41 R1J H13 H13 H 0 1 N N N N N N 18.830 17.635 -6.832 -1.373 -4.767 -0.973 H13 R1J 42 R1J H14 H14 H 0 1 N N N N N N 19.163 18.521 -5.305 -3.132 -4.765 -0.699 H14 R1J 43 R1J H15 H15 H 0 1 N N N N N N 16.679 21.184 -7.415 -1.649 -5.880 3.054 H15 R1J 44 R1J H16 H16 H 0 1 N N N N N N 16.120 12.566 -4.305 -5.708 1.143 2.001 H16 R1J 45 R1J H17 H17 H 0 1 N N N N N N 15.385 10.301 -4.553 -4.804 4.039 1.914 H17 R1J 46 R1J H18 H18 H 0 1 N N N N N N 13.658 10.906 -4.939 -5.707 3.154 3.292 H18 R1J 47 R1J H19 H19 H 0 1 N N N N N N 16.143 17.895 0.219 1.611 1.241 -2.003 H19 R1J 48 R1J H20 H20 H 0 1 N N N N N N 15.281 18.323 2.482 3.811 1.722 -1.008 H20 R1J 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R1J C16 C15 TRIP N N 1 R1J C15 C14 SING N N 2 R1J O19 S17 DOUB N N 3 R1J C14 O13 SING N N 4 R1J O13 C12 SING N N 5 R1J S17 C20 SING N N 6 R1J S17 O18 DOUB N N 7 R1J S17 N09 SING N N 8 R1J C21 C20 DOUB N N 9 R1J C12 C11 SING N N 10 R1J C10 C11 SING N N 11 R1J C10 N09 SING N N 12 R1J C11 N06 SING N N 13 R1J N09 C08 SING N N 14 R1J N06 C05 SING N N 15 R1J N06 C07 SING N N 16 R1J C08 C07 SING N N 17 R1J C05 C04 SING N N 18 R1J C04 C03 DOUB Y N 19 R1J C04 C22 SING Y N 20 R1J C03 C02 SING Y N 21 R1J C22 C23 DOUB Y N 22 R1J C02 F01 SING N N 23 R1J C02 C24 DOUB Y N 24 R1J C23 C24 SING Y N 25 R1J C24 O25 SING N N 26 R1J O25 C26 SING N N 27 R1J F28 C26 SING N N 28 R1J C26 F29 SING N N 29 R1J C26 F27 SING N N 30 R1J C03 H1 SING N N 31 R1J C05 H2 SING N N 32 R1J C05 H3 SING N N 33 R1J C07 H4 SING N N 34 R1J C07 H5 SING N N 35 R1J C08 H6 SING N N 36 R1J C08 H7 SING N N 37 R1J C10 H8 SING N N 38 R1J C10 H9 SING N N 39 R1J C11 H10 SING N N 40 R1J C12 H11 SING N N 41 R1J C12 H12 SING N N 42 R1J C14 H13 SING N N 43 R1J C14 H14 SING N N 44 R1J C16 H15 SING N N 45 R1J C20 H16 SING N N 46 R1J C21 H17 SING N N 47 R1J C21 H18 SING N N 48 R1J C22 H19 SING N N 49 R1J C23 H20 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R1J SMILES ACDLabs 12.01 "c1(F)c(ccc(c1)CN2CCN(CC2COCC#C)S(/C=C)(=O)=O)OC(F)(F)F" R1J InChI InChI 1.03 "InChI=1S/C18H20F4N2O4S/c1-3-9-27-13-15-12-24(29(25,26)4-2)8-7-23(15)11-14-5-6-17(16(19)10-14)28-18(20,21)22/h1,4-6,10,15H,2,7-9,11-13H2/t15-/m1/s1" R1J InChIKey InChI 1.03 NQCGTCQEDROBSF-OAHLLOKOSA-N R1J SMILES_CANONICAL CACTVS 3.385 "Fc1cc(CN2CCN(C[C@@H]2COCC#C)[S](=O)(=O)C=C)ccc1OC(F)(F)F" R1J SMILES CACTVS 3.385 "Fc1cc(CN2CCN(C[CH]2COCC#C)[S](=O)(=O)C=C)ccc1OC(F)(F)F" R1J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C=CS(=O)(=O)N1CCN([C@H](C1)COCC#C)Cc2ccc(c(c2)F)OC(F)(F)F" R1J SMILES "OpenEye OEToolkits" 2.0.7 "C=CS(=O)(=O)N1CCN(C(C1)COCC#C)Cc2ccc(c(c2)F)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R1J "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-4-(ethenylsulfonyl)-1-{[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}-2-{[(prop-2-yn-1-yl)oxy]methyl}piperazine" R1J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-4-ethenylsulfonyl-1-[[3-fluoranyl-4-(trifluoromethyloxy)phenyl]methyl]-2-(prop-2-ynoxymethyl)piperazine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R1J "Create component" 2020-01-23 RCSB R1J "Modify PCM" 2024-09-27 PDBE R1J "Initial release" 2025-08-13 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id R1J _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C21 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #