data_R2X # _chem_comp.id R2X _chem_comp.name "(2S,5R)-N-{(1R)-1-(3-chlorophenyl)-2-[(isoquinolin-4-yl)amino]-2-oxoethyl}-5-(pyrrolidine-1-carbonyl)oxolane-2-carboxamide (non-preferred name)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 Cl N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-21 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 506.981 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R2X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GL0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R2X N1 N1 N 0 1 N N N N N N -27.650 5.450 26.566 7.344 0.562 0.404 N1 R2X 1 R2X N3 N2 N 0 1 Y N N N N N -16.584 4.367 25.662 -5.528 2.736 -1.784 N3 R2X 2 R2X C4 C1 C 0 1 Y N N N N N -22.305 4.407 29.583 -1.009 -1.347 -0.492 C4 R2X 3 R2X C5 C2 C 0 1 Y N N N N N -22.636 3.088 29.877 -1.480 -2.456 0.184 C5 R2X 4 R2X C6 C3 C 0 1 N N R N N N -21.960 4.790 28.149 -0.984 -0.003 0.191 C6 R2X 5 R2X C7 C4 C 0 1 N N N N N N -22.658 7.100 27.647 1.382 0.472 0.530 C7 R2X 6 R2X C8 C5 C 0 1 N N S N N N -23.611 7.968 26.837 2.651 1.198 0.164 C8 R2X 7 R2X C10 C6 C 0 1 N N N N N N -25.747 7.782 27.867 4.661 0.740 -1.133 C10 R2X 8 R2X C13 C7 C 0 1 N N N N N N -28.239 4.159 26.934 8.562 -0.134 0.845 C13 R2X 9 R2X C15 C8 C 0 1 N N N N N N -29.864 5.973 27.035 9.206 1.845 -0.389 C15 R2X 10 R2X C17 C9 C 0 1 N N N N N N -20.449 5.052 27.930 -2.173 0.809 -0.254 C17 R2X 11 R2X C20 C10 C 0 1 Y N N N N N -16.141 5.589 25.405 -6.644 2.753 -1.094 C20 R2X 12 R2X C21 C11 C 0 1 Y N N N N N -16.940 6.756 25.465 -6.782 1.944 0.046 C21 R2X 13 R2X C22 C12 C 0 1 Y N N N N N -16.432 8.056 25.218 -7.958 1.933 0.812 C22 R2X 14 R2X C24 C13 C 0 1 Y N N N N N -18.596 9.002 25.611 -6.969 0.317 2.283 C24 R2X 15 R2X C26 C14 C 0 1 Y N N N N N -18.313 6.601 25.808 -5.695 1.117 0.429 C26 R2X 16 R2X O3 O1 O 0 1 N N N N N N -19.663 5.166 28.874 -2.006 1.872 -0.813 O3 R2X 17 R2X N2 N3 N 0 1 N N N N N N -20.085 5.126 26.627 -3.422 0.353 -0.030 N2 R2X 18 R2X C18 C15 C 0 1 Y N N N N N -18.786 5.284 26.108 -4.523 1.146 -0.358 C18 R2X 19 R2X C25 C16 C 0 1 Y N N N N N -19.124 7.765 25.860 -5.812 0.302 1.563 C25 R2X 20 R2X C23 C17 C 0 1 Y N N N N N -17.250 9.147 25.296 -8.037 1.129 1.909 C23 R2X 21 R2X C19 C18 C 0 1 Y N N N N N -17.872 4.233 26.005 -4.493 1.977 -1.459 C19 R2X 22 R2X C3 C19 C 0 1 Y N N N N N -22.272 5.339 30.613 -0.556 -1.469 -1.792 C3 R2X 23 R2X C2 C20 C 0 1 Y N N N N N -22.551 4.963 31.919 -0.575 -2.702 -2.418 C2 R2X 24 R2X C1 C21 C 0 1 Y N N N N N -22.869 3.646 32.214 -1.045 -3.813 -1.742 C1 R2X 25 R2X C C22 C 0 1 Y N N N N N -22.897 2.725 31.184 -1.497 -3.691 -0.441 C R2X 26 R2X CL CL1 CL 0 0 N N N N N N -23.211 1.054 31.546 -2.088 -5.085 0.408 CL R2X 27 R2X N N4 N 0 1 N N N N N N -22.867 5.778 27.584 0.250 0.702 -0.165 N R2X 28 R2X O O2 O 0 1 N N N N N N -21.780 7.624 28.333 1.379 -0.319 1.449 O R2X 29 R2X O1 O3 O 0 1 N N N N N N -24.462 7.164 25.993 3.727 0.803 1.043 O1 R2X 30 R2X C11 C23 C 0 1 N N R N N N -25.820 7.111 26.498 4.940 1.138 0.333 C11 R2X 31 R2X C9 C24 C 0 1 N N N N N N -24.565 8.750 27.715 3.121 0.781 -1.247 C9 R2X 32 R2X C12 C25 C 0 1 N N N N N N -26.320 5.661 26.570 6.101 0.349 0.879 C12 R2X 33 R2X O2 O4 O 0 1 N N N N N N -25.528 4.736 26.644 5.918 -0.479 1.747 O2 R2X 34 R2X C16 C26 C 0 1 N N N N N N -28.687 6.423 26.215 7.709 1.538 -0.640 C16 R2X 35 R2X C14 C27 C 0 1 N N N N N N -29.728 4.460 27.041 9.742 0.457 0.045 C14 R2X 36 R2X H1 H1 H 0 1 N N N N N N -22.689 2.352 29.088 -1.833 -2.360 1.200 H1 R2X 37 R2X H2 H2 H 0 1 N N N N N N -22.153 3.872 27.574 -1.023 -0.144 1.271 H2 R2X 38 R2X H3 H3 H 0 1 N N N N N N -23.025 8.670 26.225 2.497 2.276 0.209 H3 R2X 39 R2X H4 H4 H 0 1 N N N N N N -26.677 8.326 28.091 5.114 1.459 -1.816 H4 R2X 40 R2X H5 H5 H 0 1 N N N N N N -25.554 7.044 28.659 5.035 -0.264 -1.335 H5 R2X 41 R2X H6 H6 H 0 1 N N N N N N -28.046 3.404 26.158 8.717 0.031 1.911 H6 R2X 42 R2X H7 H7 H 0 1 N N N N N N -27.840 3.806 27.896 8.473 -1.201 0.641 H7 R2X 43 R2X H8 H8 H 0 1 N N N N N N -29.810 6.377 28.057 9.693 2.183 -1.304 H8 R2X 44 R2X H9 H9 H 0 1 N N N N N N -30.811 6.282 26.568 9.327 2.578 0.408 H9 R2X 45 R2X H10 H10 H 0 1 N N N N N N -15.102 5.702 25.132 -7.459 3.391 -1.403 H10 R2X 46 R2X H11 H11 H 0 1 N N N N N N -15.390 8.185 24.966 -8.794 2.558 0.535 H11 R2X 47 R2X H12 H12 H 0 1 N N N N N N -19.231 9.874 25.660 -7.059 -0.312 3.157 H12 R2X 48 R2X H13 H13 H 0 1 N N N N N N -20.824 5.061 25.957 -3.555 -0.525 0.359 H13 R2X 49 R2X H14 H14 H 0 1 N N N N N N -20.173 7.672 26.100 -4.991 -0.332 1.864 H14 R2X 50 R2X H15 H15 H 0 1 N N N N N N -16.847 10.132 25.111 -8.942 1.121 2.498 H15 R2X 51 R2X H16 H16 H 0 1 N N N N N N -18.231 3.237 26.218 -3.602 2.010 -2.069 H16 R2X 52 R2X H17 H17 H 0 1 N N N N N N -22.026 6.368 30.394 -0.189 -0.602 -2.320 H17 R2X 53 R2X H18 H18 H 0 1 N N N N N N -22.520 5.699 32.709 -0.221 -2.797 -3.434 H18 R2X 54 R2X H19 H19 H 0 1 N N N N N N -23.090 3.346 33.228 -1.059 -4.776 -2.231 H19 R2X 55 R2X H20 H20 H 0 1 N N N N N N -23.692 5.452 27.123 0.252 1.335 -0.900 H20 R2X 56 R2X H21 H21 H 0 1 N N N N N N -26.491 7.690 25.847 5.140 2.207 0.407 H21 R2X 57 R2X H22 H22 H 0 1 N N N N N N -24.111 8.979 28.690 2.731 -0.204 -1.504 H22 R2X 58 R2X H23 H23 H 0 1 N N N N N N -24.877 9.685 27.228 2.812 1.520 -1.987 H23 R2X 59 R2X H24 H24 H 0 1 N N N N N N -28.381 7.443 26.489 7.571 1.103 -1.630 H24 R2X 60 R2X H25 H25 H 0 1 N N N N N N -28.917 6.386 25.140 7.113 2.444 -0.537 H25 R2X 61 R2X H26 H26 H 0 1 N N N N N N -30.266 4.027 26.185 10.621 0.567 0.680 H26 R2X 62 R2X H27 H27 H 0 1 N N N N N N -30.133 4.046 27.976 9.968 -0.161 -0.823 H27 R2X 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R2X C22 C23 DOUB Y N 1 R2X C22 C21 SING Y N 2 R2X C23 C24 SING Y N 3 R2X C20 C21 DOUB Y N 4 R2X C20 N3 SING Y N 5 R2X C21 C26 SING Y N 6 R2X C24 C25 DOUB Y N 7 R2X N3 C19 DOUB Y N 8 R2X C26 C25 SING Y N 9 R2X C26 C18 DOUB Y N 10 R2X O1 C11 SING N N 11 R2X O1 C8 SING N N 12 R2X C19 C18 SING Y N 13 R2X C18 N2 SING N N 14 R2X C16 N1 SING N N 15 R2X C16 C15 SING N N 16 R2X C11 C12 SING N N 17 R2X C11 C10 SING N N 18 R2X N1 C12 SING N N 19 R2X N1 C13 SING N N 20 R2X C12 O2 DOUB N N 21 R2X N2 C17 SING N N 22 R2X C8 C7 SING N N 23 R2X C8 C9 SING N N 24 R2X C13 C14 SING N N 25 R2X C15 C14 SING N N 26 R2X N C7 SING N N 27 R2X N C6 SING N N 28 R2X C7 O DOUB N N 29 R2X C9 C10 SING N N 30 R2X C17 C6 SING N N 31 R2X C17 O3 DOUB N N 32 R2X C6 C4 SING N N 33 R2X C4 C5 DOUB Y N 34 R2X C4 C3 SING Y N 35 R2X C5 C SING Y N 36 R2X C3 C2 DOUB Y N 37 R2X C CL SING N N 38 R2X C C1 DOUB Y N 39 R2X C2 C1 SING Y N 40 R2X C5 H1 SING N N 41 R2X C6 H2 SING N N 42 R2X C8 H3 SING N N 43 R2X C10 H4 SING N N 44 R2X C10 H5 SING N N 45 R2X C13 H6 SING N N 46 R2X C13 H7 SING N N 47 R2X C15 H8 SING N N 48 R2X C15 H9 SING N N 49 R2X C20 H10 SING N N 50 R2X C22 H11 SING N N 51 R2X C24 H12 SING N N 52 R2X N2 H13 SING N N 53 R2X C25 H14 SING N N 54 R2X C23 H15 SING N N 55 R2X C19 H16 SING N N 56 R2X C3 H17 SING N N 57 R2X C2 H18 SING N N 58 R2X C1 H19 SING N N 59 R2X N H20 SING N N 60 R2X C11 H21 SING N N 61 R2X C9 H22 SING N N 62 R2X C9 H23 SING N N 63 R2X C16 H24 SING N N 64 R2X C16 H25 SING N N 65 R2X C14 H26 SING N N 66 R2X C14 H27 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R2X SMILES ACDLabs 12.01 "O=C(NC(c1cccc(Cl)c1)C(=O)Nc1cncc2ccccc21)C1CCC(O1)C(=O)N1CCCC1" R2X InChI InChI 1.06 "InChI=1S/C27H27ClN4O4/c28-19-8-5-7-17(14-19)24(26(34)30-21-16-29-15-18-6-1-2-9-20(18)21)31-25(33)22-10-11-23(36-22)27(35)32-12-3-4-13-32/h1-2,5-9,14-16,22-24H,3-4,10-13H2,(H,30,34)(H,31,33)/t22-,23+,24+/m0/s1" R2X InChIKey InChI 1.06 RZBYEPRBZPLACH-RBZQAINGSA-N R2X SMILES_CANONICAL CACTVS 3.385 "Clc1cccc(c1)[C@@H](NC(=O)[C@@H]2CC[C@@H](O2)C(=O)N3CCCC3)C(=O)Nc4cncc5ccccc45" R2X SMILES CACTVS 3.385 "Clc1cccc(c1)[CH](NC(=O)[CH]2CC[CH](O2)C(=O)N3CCCC3)C(=O)Nc4cncc5ccccc45" R2X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cncc2NC(=O)[C@@H](c3cccc(c3)Cl)NC(=O)[C@@H]4CC[C@@H](O4)C(=O)N5CCCC5" R2X SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cncc2NC(=O)C(c3cccc(c3)Cl)NC(=O)C4CCC(O4)C(=O)N5CCCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R2X "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,5R)-N-{(1R)-1-(3-chlorophenyl)-2-[(isoquinolin-4-yl)amino]-2-oxoethyl}-5-(pyrrolidine-1-carbonyl)oxolane-2-carboxamide (non-preferred name)" R2X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},5~{R})-~{N}-[(1~{R})-1-(3-chlorophenyl)-2-(isoquinolin-4-ylamino)-2-oxidanylidene-ethyl]-5-pyrrolidin-1-ylcarbonyl-oxolane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R2X "Create component" 2023-08-21 RCSB R2X "Initial release" 2023-11-08 RCSB #