data_R3U # _chem_comp.id R3U _chem_comp.name "(4~{R})-4-[(3~{R},4~{R},5~{S},6~{R},7~{R},8~{S},9~{S},10~{R},13~{R},14~{R},17~{R})-6-ethyl-4-fluoranyl-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]-~{N}-[4-(trifluoromethyloxy)phenyl]sulfonyl-pentanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H47 F4 N O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-23 _chem_comp.pdbx_modified_date 2025-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 661.788 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BQ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R3U N1 N1 N 0 1 N N N N N N -23.573 -3.433 9.388 -3.724 -3.076 0.807 N1 R3U 1 R3U C4 C1 C 0 1 N N R N N N -23.589 5.059 7.645 2.134 -1.199 -0.475 C4 R3U 2 R3U C5 C2 C 0 1 N N S N N N -23.333 6.594 7.764 3.115 -0.610 0.510 C5 R3U 3 R3U C6 C3 C 0 1 N N R N N N -22.976 7.307 6.446 2.704 0.815 0.887 C6 R3U 4 R3U C7 C4 C 0 1 N N R N N N -22.992 8.830 6.639 3.663 1.359 1.948 C7 R3U 5 R3U C8 C5 C 0 1 N N N N N N -22.814 9.573 5.300 3.252 2.784 2.324 C8 R3U 6 R3U C10 C6 C 0 1 N N S N N N -22.040 9.265 7.798 5.088 1.368 1.391 C10 R3U 7 R3U C13 C7 C 0 1 N N N N N N -20.495 10.111 9.856 6.980 0.847 -0.784 C13 R3U 8 R3U C15 C8 C 0 1 N N R N N N -22.443 8.564 9.126 5.498 -0.056 1.014 C15 R3U 9 R3U C17 C9 C 0 1 N N S N N N -22.376 7.020 8.895 4.538 -0.601 -0.046 C17 R3U 10 R3U C20 C10 C 0 1 N N R N N N -23.465 4.139 8.890 2.555 -2.576 -1.018 C20 R3U 11 R3U C21 C11 C 0 1 N N N N N N -24.820 4.056 9.613 2.297 -3.688 0.001 C21 R3U 12 R3U C22 C12 C 0 1 N N R N N N -23.588 1.463 9.002 0.389 -3.494 -1.937 C22 R3U 13 R3U C24 C13 C 0 1 N N N N N N -23.283 0.179 8.211 -0.462 -2.648 -0.988 C24 R3U 14 R3U C26 C14 C 0 1 N N N N N N -23.440 -2.415 8.459 -2.560 -2.591 0.333 C26 R3U 15 R3U C28 C15 C 0 1 Y N N N N N -21.440 -6.071 7.494 -6.377 -0.794 0.215 C28 R3U 16 R3U C1 C16 C 0 1 N N R N N N -23.114 2.740 8.283 1.672 -2.737 -2.284 C1 R3U 17 R3U C11 C17 C 0 1 N N R N N N -20.532 9.110 7.557 5.145 2.262 0.150 C11 R3U 18 R3U C12 C18 C 0 1 N N R N N N -19.683 9.779 8.619 6.571 2.272 -0.405 C12 R3U 19 R3U C14 C19 C 0 1 N N N N N N -21.456 8.986 10.237 6.923 -0.047 0.456 C14 R3U 20 R3U C16 C20 C 0 1 N N N N N N -23.857 9.010 9.552 5.443 -0.948 2.256 C16 R3U 21 R3U C18 C21 C 0 1 N N N N N N -22.615 6.175 10.148 4.933 -2.041 -0.392 C18 R3U 22 R3U C19 C22 C 0 1 N N N N N N -22.404 4.693 9.846 4.017 -2.555 -1.472 C19 R3U 23 R3U C2 C23 C 0 1 N N N N N N -23.550 2.838 6.802 1.334 -1.312 -2.759 C2 R3U 24 R3U C23 C24 C 0 1 N N N N N N -22.986 1.333 10.399 -0.400 -3.774 -3.217 C23 R3U 25 R3U C25 C25 C 0 1 N N N N N N -23.506 -1.046 9.095 -1.722 -3.425 -0.602 C25 R3U 26 R3U C27 C26 C 0 1 Y N N N N N -21.734 -5.218 8.545 -5.188 -0.748 0.919 C27 R3U 27 R3U C29 C27 C 0 1 Y N N N N N -20.133 -6.248 7.097 -6.799 0.308 -0.504 C29 R3U 28 R3U C3 C28 C 0 1 N N N N N N -23.130 4.264 6.424 1.984 -0.342 -1.746 C3 R3U 29 R3U C30 C29 C 0 1 Y N N N N N -19.117 -5.577 7.756 -6.028 1.461 -0.519 C30 R3U 30 R3U C31 C30 C 0 1 N N N N N N -17.061 -6.679 7.994 -5.597 3.698 -1.197 C31 R3U 31 R3U C32 C31 C 0 1 Y N N N N N -19.409 -4.727 8.812 -4.836 1.505 0.188 C32 R3U 32 R3U C33 C32 C 0 1 Y N N N N N -20.717 -4.547 9.208 -4.421 0.403 0.910 C33 R3U 33 R3U C9 C33 C 0 1 N N N N N N -22.821 11.086 5.419 1.878 2.758 2.995 C9 R3U 34 R3U F1 F1 F 0 1 N N N N N N -20.171 9.638 6.345 4.770 3.565 0.496 F1 R3U 35 R3U F2 F2 F 0 1 N N N N N N -16.920 -6.371 9.270 -4.340 3.369 -1.714 F2 R3U 36 R3U F3 F3 F 0 1 N N N N N N -17.614 -7.888 7.919 -5.457 4.141 0.123 F3 R3U 37 R3U F4 F4 F 0 1 N N N N N N -15.845 -6.758 7.497 -6.168 4.714 -1.971 F4 R3U 38 R3U O1 O1 O 0 1 N N N N N N -21.704 6.878 5.948 2.755 1.648 -0.273 O1 R3U 39 R3U O2 O2 O 0 1 N N N N N N -18.561 8.940 8.903 6.625 3.107 -1.564 O2 R3U 40 R3U O3 O3 O 0 1 N N N N N N -23.295 -2.644 7.281 -2.186 -1.484 0.658 O3 R3U 41 R3U O4 O4 O 0 1 N N N N N N -24.237 -5.275 7.909 -5.813 -2.921 2.113 O4 R3U 42 R3U O5 O5 O 0 1 N N N N N N -23.621 -5.701 10.264 -3.772 -1.672 2.837 O5 R3U 43 R3U O6 O6 O 0 1 N N N N N N -17.773 -5.769 7.341 -6.441 2.546 -1.226 O6 R3U 44 R3U S1 S1 S 0 1 N N N N N N -23.408 -5.004 9.037 -4.649 -2.157 1.829 S1 R3U 45 R3U H1 H1 H 0 1 N N N N N N -23.784 -3.182 10.333 -4.023 -3.961 0.548 H1 R3U 46 R3U H2 H2 H 0 1 N N N N N N -24.679 5.049 7.496 1.158 -1.286 0.000 H2 R3U 47 R3U H3 H3 H 0 1 N N N N N N -24.308 7.014 8.052 3.099 -1.212 1.418 H3 R3U 48 R3U H4 H4 H 0 1 N N N N N N -23.753 7.055 5.709 1.689 0.807 1.284 H4 R3U 49 R3U H5 H5 H 0 1 N N N N N N -24.007 9.077 6.984 3.623 0.724 2.833 H5 R3U 50 R3U H6 H6 H 0 1 N N N N N N -23.634 9.276 4.630 3.985 3.203 3.013 H6 R3U 51 R3U H7 H7 H 0 1 N N N N N N -21.853 9.266 4.861 3.206 3.398 1.424 H7 R3U 52 R3U H8 H8 H 0 1 N N N N N N -22.220 10.339 7.953 5.771 1.755 2.147 H8 R3U 53 R3U H9 H9 H 0 1 N N N N N N -19.806 10.287 10.695 6.297 0.462 -1.541 H9 R3U 54 R3U H10 H10 H 0 1 N N N N N N -21.078 11.024 9.662 7.995 0.854 -1.181 H10 R3U 55 R3U H11 H11 H 0 1 N N N N N N -21.356 6.798 8.549 4.580 0.025 -0.937 H11 R3U 56 R3U H12 H12 H 0 1 N N N N N N -24.727 3.404 10.494 1.260 -3.643 0.333 H12 R3U 57 R3U H13 H13 H 0 1 N N N N N N -25.127 5.063 9.933 2.488 -4.656 -0.463 H13 R3U 58 R3U H14 H14 H 0 1 N N N N N N -25.576 3.643 8.929 2.960 -3.558 0.856 H14 R3U 59 R3U H15 H15 H 0 1 N N N N N N -24.680 1.532 9.114 0.643 -4.437 -1.453 H15 R3U 60 R3U H16 H16 H 0 1 N N N N N N -23.948 0.123 7.337 0.113 -2.418 -0.091 H16 R3U 61 R3U H17 H17 H 0 1 N N N N N N -22.236 0.199 7.874 -0.746 -1.720 -1.485 H17 R3U 62 R3U H18 H18 H 0 1 N N N N N N -22.235 -6.597 6.986 -6.975 -1.694 0.224 H18 R3U 63 R3U H19 H19 H 0 1 N N N N N N -22.015 2.689 8.270 2.223 -3.270 -3.059 H19 R3U 64 R3U H20 H20 H 0 1 N N N N N N -20.304 8.034 7.575 4.463 1.876 -0.607 H20 R3U 65 R3U H21 H21 H 0 1 N N N N N N -19.315 10.727 8.200 7.253 2.657 0.352 H21 R3U 66 R3U H22 H22 H 0 1 N N N N N N -22.043 9.319 11.106 7.214 -1.062 0.186 H22 R3U 67 R3U H23 H23 H 0 1 N N N N N N -20.858 8.106 10.514 7.607 0.338 1.213 H23 R3U 68 R3U H24 H24 H 0 1 N N N N N N -24.133 8.509 10.492 4.428 -0.955 2.653 H24 R3U 69 R3U H25 H25 H 0 1 N N N N N N -23.868 10.100 9.701 5.735 -1.963 1.987 H25 R3U 70 R3U H26 H26 H 0 1 N N N N N N -24.579 8.740 8.767 6.126 -0.561 3.012 H26 R3U 71 R3U H27 H27 H 0 1 N N N N N N -21.912 6.487 10.934 5.965 -2.064 -0.739 H27 R3U 72 R3U H28 H28 H 0 1 N N N N N N -23.647 6.329 10.497 4.830 -2.671 0.492 H28 R3U 73 R3U H29 H29 H 0 1 N N N N N N -22.449 4.130 10.790 4.318 -3.562 -1.760 H29 R3U 74 R3U H30 H30 H 0 1 N N N N N N -21.412 4.563 9.388 4.116 -1.892 -2.331 H30 R3U 75 R3U H31 H31 H 0 1 N N N N N N -24.637 2.703 6.698 1.744 -1.142 -3.754 H31 R3U 76 R3U H32 H32 H 0 1 N N N N N N -23.027 2.093 6.184 0.253 -1.169 -2.773 H32 R3U 77 R3U H33 H33 H 0 1 N N N N N N -23.197 2.245 10.976 -1.333 -4.279 -2.966 H33 R3U 78 R3U H34 H34 H 0 1 N N N N N N -23.429 0.466 10.910 -0.621 -2.833 -3.721 H34 R3U 79 R3U H35 H35 H 0 1 N N N N N N -21.898 1.194 10.318 0.191 -4.409 -3.877 H35 R3U 80 R3U H36 H36 H 0 1 N N N N N N -22.743 -1.019 9.887 -2.297 -3.654 -1.499 H36 R3U 81 R3U H37 H37 H 0 1 N N N N N N -24.505 -0.945 9.545 -1.438 -4.353 -0.105 H37 R3U 82 R3U H38 H38 H 0 1 N N N N N N -19.901 -6.908 6.274 -7.728 0.271 -1.053 H38 R3U 83 R3U H39 H39 H 0 1 N N N N N N -22.041 4.337 6.285 1.332 0.511 -1.558 H39 R3U 84 R3U H40 H40 H 0 1 N N N N N N -23.640 4.603 5.510 2.959 -0.010 -2.103 H40 R3U 85 R3U H41 H41 H 0 1 N N N N N N -18.613 -4.207 9.323 -4.234 2.402 0.177 H41 R3U 86 R3U H42 H42 H 0 1 N N N N N N -20.949 -3.887 10.031 -3.493 0.437 1.461 H42 R3U 87 R3U H43 H43 H 0 1 N N N N N N -22.689 11.533 4.423 1.585 3.774 3.263 H43 R3U 88 R3U H44 H44 H 0 1 N N N N N N -23.780 11.416 5.845 1.145 2.339 2.306 H44 R3U 89 R3U H45 H45 H 0 1 N N N N N N -21.999 11.406 6.076 1.924 2.144 3.895 H45 R3U 90 R3U H46 H46 H 0 1 N N N N N N -21.710 5.935 5.834 2.506 2.568 -0.108 H46 R3U 91 R3U H47 H47 H 0 1 N N N N N N -18.020 9.349 9.568 7.501 3.160 -1.970 H47 R3U 92 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R3U C8 C9 SING N N 1 R3U C8 C7 SING N N 2 R3U O1 C6 SING N N 3 R3U F1 C11 SING N N 4 R3U C3 C2 SING N N 5 R3U C3 C4 SING N N 6 R3U C6 C7 SING N N 7 R3U C6 C5 SING N N 8 R3U C7 C10 SING N N 9 R3U C2 C1 SING N N 10 R3U C29 C28 DOUB Y N 11 R3U C29 C30 SING Y N 12 R3U O3 C26 DOUB N N 13 R3U O6 C30 SING N N 14 R3U O6 C31 SING N N 15 R3U C28 C27 SING Y N 16 R3U F4 C31 SING N N 17 R3U C11 C10 SING N N 18 R3U C11 C12 SING N N 19 R3U C4 C5 SING N N 20 R3U C4 C20 SING N N 21 R3U C30 C32 DOUB Y N 22 R3U C5 C17 SING N N 23 R3U C10 C15 SING N N 24 R3U O4 S1 DOUB N N 25 R3U F3 C31 SING N N 26 R3U C31 F2 SING N N 27 R3U C24 C22 SING N N 28 R3U C24 C25 SING N N 29 R3U C1 C20 SING N N 30 R3U C1 C22 SING N N 31 R3U C26 C25 SING N N 32 R3U C26 N1 SING N N 33 R3U C27 S1 SING N N 34 R3U C27 C33 DOUB Y N 35 R3U C12 O2 SING N N 36 R3U C12 C13 SING N N 37 R3U C32 C33 SING Y N 38 R3U C20 C21 SING N N 39 R3U C20 C19 SING N N 40 R3U C17 C15 SING N N 41 R3U C17 C18 SING N N 42 R3U C22 C23 SING N N 43 R3U S1 N1 SING N N 44 R3U S1 O5 DOUB N N 45 R3U C15 C16 SING N N 46 R3U C15 C14 SING N N 47 R3U C19 C18 SING N N 48 R3U C13 C14 SING N N 49 R3U N1 H1 SING N N 50 R3U C4 H2 SING N N 51 R3U C5 H3 SING N N 52 R3U C6 H4 SING N N 53 R3U C7 H5 SING N N 54 R3U C8 H6 SING N N 55 R3U C8 H7 SING N N 56 R3U C10 H8 SING N N 57 R3U C13 H9 SING N N 58 R3U C13 H10 SING N N 59 R3U C17 H11 SING N N 60 R3U C21 H12 SING N N 61 R3U C21 H13 SING N N 62 R3U C21 H14 SING N N 63 R3U C22 H15 SING N N 64 R3U C24 H16 SING N N 65 R3U C24 H17 SING N N 66 R3U C28 H18 SING N N 67 R3U C1 H19 SING N N 68 R3U C11 H20 SING N N 69 R3U C12 H21 SING N N 70 R3U C14 H22 SING N N 71 R3U C14 H23 SING N N 72 R3U C16 H24 SING N N 73 R3U C16 H25 SING N N 74 R3U C16 H26 SING N N 75 R3U C18 H27 SING N N 76 R3U C18 H28 SING N N 77 R3U C19 H29 SING N N 78 R3U C19 H30 SING N N 79 R3U C2 H31 SING N N 80 R3U C2 H32 SING N N 81 R3U C23 H33 SING N N 82 R3U C23 H34 SING N N 83 R3U C23 H35 SING N N 84 R3U C25 H36 SING N N 85 R3U C25 H37 SING N N 86 R3U C29 H38 SING N N 87 R3U C3 H39 SING N N 88 R3U C3 H40 SING N N 89 R3U C32 H41 SING N N 90 R3U C33 H42 SING N N 91 R3U C9 H43 SING N N 92 R3U C9 H44 SING N N 93 R3U C9 H45 SING N N 94 R3U O1 H46 SING N N 95 R3U O2 H47 SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R3U InChI InChI 1.06 "InChI=1S/C33H47F4NO6S/c1-5-21-28-29(34)25(39)15-17-32(28,4)24-14-16-31(3)22(11-12-23(31)27(24)30(21)41)18(2)6-13-26(40)38-45(42,43)20-9-7-19(8-10-20)44-33(35,36)37/h7-10,18,21-25,27-30,39,41H,5-6,11-17H2,1-4H3,(H,38,40)/t18-,21-,22-,23-,24+,25-,27+,28-,29+,30-,31-,32-/m1/s1" R3U InChIKey InChI 1.06 ZGYUTSLXPGLWLX-KRYZBPAKSA-N R3U SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1[C@@H](O)[C@H]2[C@H]3CC[C@H]([C@H](C)CCC(=O)N[S](=O)(=O)c4ccc(OC(F)(F)F)cc4)[C@@]3(C)CC[C@@H]2[C@@]5(C)CC[C@@H](O)[C@H](F)[C@@H]15" R3U SMILES CACTVS 3.385 "CC[CH]1[CH](O)[CH]2[CH]3CC[CH]([CH](C)CCC(=O)N[S](=O)(=O)c4ccc(OC(F)(F)F)cc4)[C]3(C)CC[CH]2[C]5(C)CC[CH](O)[CH](F)[CH]15" R3U SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@@H]1[C@@H]2[C@H]([C@@H](CC[C@@]2([C@H]3CC[C@]4([C@@H]([C@@H]3[C@@H]1O)CC[C@@H]4[C@H](C)CCC(=O)NS(=O)(=O)c5ccc(cc5)OC(F)(F)F)C)C)O)F" R3U SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC1C2C(C(CCC2(C3CCC4(C(C3C1O)CCC4C(C)CCC(=O)NS(=O)(=O)c5ccc(cc5)OC(F)(F)F)C)C)O)F" # _pdbx_chem_comp_identifier.comp_id R3U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(4~{R})-4-[(3~{R},4~{R},5~{S},6~{R},7~{R},8~{S},9~{S},10~{R},13~{R},14~{R},17~{R})-6-ethyl-4-fluoranyl-10,13-dimethyl-3,7-bis(oxidanyl)-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]-~{N}-[4-(trifluoromethyloxy)phenyl]sulfonyl-pentanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R3U "Create component" 2022-11-23 PDBE R3U "Initial release" 2025-09-10 RCSB #