data_R5C # _chem_comp.id R5C _chem_comp.name "(4-nitrophenyl) butanoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H11 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-31 _chem_comp.pdbx_modified_date 2024-12-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 209.199 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R5C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ISD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R5C C1 C1 C 0 1 N N N N N N 32.943 3.780 2.622 6.109 -0.149 -0.501 C1 R5C 1 R5C C2 C2 C 0 1 N N N N N N 32.417 2.561 1.946 4.617 -0.399 -0.733 C2 R5C 2 R5C C3 C3 C 0 1 N N N N N N 32.597 2.556 0.436 3.808 0.280 0.373 C3 R5C 3 R5C C4 C4 C 0 1 N N N N N N 31.957 1.383 -0.249 2.339 0.034 0.145 C4 R5C 4 R5C O1 O1 O 0 1 N N N N N N 31.648 0.332 0.249 1.977 -0.618 -0.806 O1 R5C 5 R5C O2 O2 O 0 1 N N N N N N 31.758 1.662 -1.594 1.433 0.539 0.997 O2 R5C 6 R5C C5 C5 C 0 1 Y N N N N N 31.297 0.651 -2.468 0.123 0.367 0.678 C5 R5C 7 R5C C6 C6 C 0 1 Y N N N N N 30.186 0.847 -3.279 -0.487 -0.863 0.878 C6 R5C 8 R5C C7 C7 C 0 1 Y N N N N N 29.758 -0.158 -4.136 -1.818 -1.034 0.553 C7 R5C 9 R5C C8 C8 C 0 1 Y N N N N N 30.456 -1.352 -4.176 -2.544 0.019 0.028 C8 R5C 10 R5C N1 N1 N 1 1 N N N N N N 30.003 -2.447 -5.065 -3.971 -0.167 -0.319 N1 R5C 11 R5C O3 O3 O 0 1 N N N N N N 30.622 -3.512 -5.044 -4.504 -1.247 -0.142 O3 R5C 12 R5C O4 O4 O -1 1 N N N N N N 29.005 -2.259 -5.768 -4.611 0.760 -0.782 O4 R5C 13 R5C C9 C9 C 0 1 Y N N N N N 31.565 -1.560 -3.380 -1.939 1.246 -0.173 C9 R5C 14 R5C C10 C10 C 0 1 Y N N N N N 31.983 -0.552 -2.525 -0.609 1.424 0.156 C10 R5C 15 R5C H1 H1 H 0 1 N N N N N N 32.773 3.701 3.706 6.304 0.924 -0.513 H1 R5C 16 R5C H2 H2 H 0 1 N N N N N N 34.022 3.871 2.426 6.400 -0.559 0.466 H2 R5C 17 R5C H3 H3 H 0 1 N N N N N N 32.423 4.668 2.233 6.686 -0.632 -1.289 H3 R5C 18 R5C H5 H4 H 0 1 N N N N N N 31.342 2.482 2.165 4.327 0.012 -1.700 H5 R5C 19 R5C H4 H5 H 0 1 N N N N N N 32.940 1.686 2.358 4.422 -1.471 -0.720 H4 R5C 20 R5C H7 H6 H 0 1 N N N N N N 33.675 2.540 0.216 4.099 -0.131 1.340 H7 R5C 21 R5C H6 H7 H 0 1 N N N N N N 32.154 3.478 0.031 4.003 1.352 0.361 H6 R5C 22 R5C H8 H8 H 0 1 N N N N N N 29.653 1.786 -3.243 0.080 -1.686 1.288 H8 R5C 23 R5C H9 H9 H 0 1 N N N N N N 28.891 -0.010 -4.763 -2.293 -1.991 0.710 H9 R5C 24 R5C H10 H10 H 0 1 N N N N N N 32.100 -2.497 -3.423 -2.508 2.067 -0.584 H10 R5C 25 R5C H11 H11 H 0 1 N N N N N N 32.849 -0.705 -1.899 -0.137 2.383 -0.002 H11 R5C 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R5C O4 N1 SING N N 1 R5C N1 O3 DOUB N N 2 R5C N1 C8 SING N N 3 R5C C8 C7 DOUB Y N 4 R5C C8 C9 SING Y N 5 R5C C7 C6 SING Y N 6 R5C C9 C10 DOUB Y N 7 R5C C6 C5 DOUB Y N 8 R5C C10 C5 SING Y N 9 R5C C5 O2 SING N N 10 R5C O2 C4 SING N N 11 R5C C4 O1 DOUB N N 12 R5C C4 C3 SING N N 13 R5C C3 C2 SING N N 14 R5C C2 C1 SING N N 15 R5C C1 H1 SING N N 16 R5C C1 H2 SING N N 17 R5C C1 H3 SING N N 18 R5C C2 H5 SING N N 19 R5C C2 H4 SING N N 20 R5C C3 H7 SING N N 21 R5C C3 H6 SING N N 22 R5C C6 H8 SING N N 23 R5C C7 H9 SING N N 24 R5C C9 H10 SING N N 25 R5C C10 H11 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R5C InChI InChI 1.06 "InChI=1S/C10H11NO4/c1-2-3-10(12)15-9-6-4-8(5-7-9)11(13)14/h4-7H,2-3H2,1H3" R5C InChIKey InChI 1.06 DVDUMIQZEUTAGK-UHFFFAOYSA-N R5C SMILES_CANONICAL CACTVS 3.385 "CCCC(=O)Oc1ccc(cc1)[N+]([O-])=O" R5C SMILES CACTVS 3.385 "CCCC(=O)Oc1ccc(cc1)[N+]([O-])=O" R5C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC(=O)Oc1ccc(cc1)[N+](=O)[O-]" R5C SMILES "OpenEye OEToolkits" 2.0.7 "CCCC(=O)Oc1ccc(cc1)[N+](=O)[O-]" # _pdbx_chem_comp_identifier.comp_id R5C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4-nitrophenyl) butanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R5C "Create component" 2023-03-31 PDBJ R5C "Initial release" 2024-12-25 RCSB #