data_R5S # _chem_comp.id R5S _chem_comp.name "3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-6,7-dihydro-5H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H26 N8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-01-30 _chem_comp.pdbx_modified_date 2021-02-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 414.506 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R5S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6VNJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R5S N12 N1 N 0 1 N N N 35.960 1.406 14.793 0.571 -1.439 -0.249 N12 R5S 1 R5S C13 C1 C 0 1 Y N N 37.210 0.803 14.283 1.966 -1.340 -0.237 C13 R5S 2 R5S C15 C2 C 0 1 Y N N 39.570 0.708 14.483 4.112 -2.158 -0.926 C15 R5S 3 R5S C17 C3 C 0 1 N N N 40.836 -0.959 12.941 6.229 -1.039 -0.199 C17 R5S 4 R5S C21 C4 C 0 1 N N N 42.576 -0.975 11.187 8.174 0.444 -0.698 C21 R5S 5 R5S C22 C5 C 0 1 N N N 41.524 -0.079 11.904 6.651 0.318 -0.770 C22 R5S 6 R5S C24 C6 C 0 1 Y N N 37.193 -0.181 13.248 2.586 -0.327 0.484 C24 R5S 7 R5S C26 C7 C 0 1 Y N N 32.424 1.754 14.495 -0.317 2.021 -0.222 C26 R5S 8 R5S C28 C8 C 0 1 N N N 30.584 0.890 13.246 -2.272 3.325 -0.087 C28 R5S 9 R5S C02 C9 C 0 1 N N N 30.952 -4.501 12.090 -8.907 -2.236 0.335 C02 R5S 10 R5S C03 C10 C 0 1 N N N 31.304 -4.695 10.559 -7.740 -1.427 0.724 C03 R5S 11 R5S C04 C11 C 0 1 N N N 31.035 -3.334 9.918 -6.977 -0.997 -0.530 C04 R5S 12 R5S C07 C12 C 0 1 Y N N 33.936 -1.531 11.001 -4.625 1.407 0.780 C07 R5S 13 R5S C08 C13 C 0 1 Y N N 32.935 -0.938 11.786 -3.766 0.544 0.070 C08 R5S 14 R5S C09 C14 C 0 1 Y N N 33.145 0.102 12.862 -2.294 0.674 -0.048 C09 R5S 15 R5S C11 C15 C 0 1 Y N N 34.582 1.184 14.299 -0.205 -0.292 -0.205 C11 R5S 16 R5S C14 C16 C 0 1 Y N N 38.415 1.229 14.882 2.734 -2.258 -0.940 C14 R5S 17 R5S C16 C17 C 0 1 Y N N 39.551 -0.258 13.442 4.726 -1.145 -0.212 C16 R5S 18 R5S C18 C18 C 0 1 N N N 41.735 -1.447 13.993 6.738 -1.160 1.240 C18 R5S 19 R5S C19 C19 C 0 1 N N N 42.824 -2.344 13.338 8.259 -0.990 1.254 C19 R5S 20 R5S C23 C20 C 0 1 Y N N 38.339 -0.701 12.858 3.964 -0.233 0.494 C23 R5S 21 R5S C27 C21 C 0 1 Y N N 32.092 0.827 13.479 -1.698 1.929 -0.112 C27 R5S 22 R5S C29 C22 C 0 1 N N N 30.058 1.914 14.240 -1.042 4.244 -0.193 C29 R5S 23 R5S C31 C23 C 0 1 Y N N 31.760 -1.560 11.453 -4.538 -0.435 -0.489 C31 R5S 24 R5S N01 N2 N 0 1 N N N 30.726 -4.415 13.226 -9.807 -2.861 0.035 N01 R5S 25 R5S N05 N3 N 0 1 Y N N 32.026 -2.440 10.553 -5.816 -0.192 -0.144 N05 R5S 26 R5S N06 N4 N 0 1 Y N N 33.375 -2.447 10.247 -5.845 0.959 0.653 N06 R5S 27 R5S N10 N5 N 0 1 Y N N 34.337 0.288 13.286 -1.518 -0.411 -0.094 N10 R5S 28 R5S N20 N6 N 0 1 N N N 43.471 -1.674 12.124 8.611 0.323 0.699 N20 R5S 29 R5S N25 N7 N 0 1 Y N N 33.648 1.901 14.906 0.392 0.887 -0.262 N25 R5S 30 R5S N30 N8 N 0 1 N N N 31.201 2.440 14.953 0.108 3.337 -0.268 N30 R5S 31 R5S H1 H1 H 0 1 N N N 36.057 2.038 15.562 0.147 -2.310 -0.292 H1 R5S 32 R5S H2 H2 H 0 1 N N N 40.501 1.012 14.939 4.710 -2.872 -1.473 H2 R5S 33 R5S H3 H3 H 0 1 N N N 40.490 -1.848 12.394 6.656 -1.839 -0.805 H3 R5S 34 R5S H4 H4 H 0 1 N N N 42.044 -1.726 10.584 8.633 -0.346 -1.292 H4 R5S 35 R5S H5 H5 H 0 1 N N N 43.186 -0.340 10.527 8.477 1.415 -1.090 H5 R5S 36 R5S H6 H6 H 0 1 N N N 42.021 0.770 12.396 6.328 0.392 -1.808 H6 R5S 37 R5S H7 H7 H 0 1 N N N 40.788 0.298 11.178 6.192 1.116 -0.187 H7 R5S 38 R5S H8 H8 H 0 1 N N N 36.263 -0.491 12.796 1.991 0.386 1.035 H8 R5S 39 R5S H9 H9 H 0 1 N N N 30.368 1.209 12.216 -2.939 3.478 -0.935 H9 R5S 40 R5S H10 H10 H 0 1 N N N 30.126 -0.093 13.429 -2.799 3.503 0.851 H10 R5S 41 R5S H11 H11 H 0 1 N N N 30.663 -5.468 10.110 -8.076 -0.543 1.266 H11 R5S 42 R5S H12 H12 H 0 1 N N N 32.360 -4.978 10.438 -7.085 -2.018 1.363 H12 R5S 43 R5S H13 H13 H 0 1 N N N 30.010 -2.997 10.132 -6.642 -1.882 -1.072 H13 R5S 44 R5S H14 H14 H 0 1 N N N 31.188 -3.377 8.829 -7.633 -0.406 -1.170 H14 R5S 45 R5S H15 H15 H 0 1 N N N 34.986 -1.277 11.015 -4.326 2.284 1.336 H15 R5S 46 R5S H16 H16 H 0 1 N N N 38.398 1.976 15.662 2.256 -3.050 -1.498 H16 R5S 47 R5S H17 H17 H 0 1 N N N 42.212 -0.594 14.498 6.280 -0.384 1.854 H17 R5S 48 R5S H18 H18 H 0 1 N N N 41.163 -2.034 14.726 6.477 -2.141 1.637 H18 R5S 49 R5S H19 H19 H 0 1 N N N 42.359 -3.288 13.016 8.623 -1.061 2.279 H19 R5S 50 R5S H20 H20 H 0 1 N N N 43.604 -2.555 14.084 8.717 -1.774 0.650 H20 R5S 51 R5S H21 H21 H 0 1 N N N 38.354 -1.464 12.094 4.446 0.555 1.053 H21 R5S 52 R5S H22 H22 H 0 1 N N N 29.539 2.725 13.708 -1.102 4.854 -1.094 H22 R5S 53 R5S H23 H23 H 0 1 N N N 30.787 -1.349 11.871 -4.186 -1.254 -1.098 H23 R5S 54 R5S H24 H24 H 0 1 N N N 43.952 -2.384 11.609 9.601 0.498 0.785 H24 R5S 55 R5S H26 H26 H 0 1 N N N 29.362 1.434 14.944 -0.965 4.878 0.690 H26 R5S 56 R5S H25 H25 H 0 1 N N N 31.282 3.421 14.775 1.033 3.619 -0.340 H25 R5S 57 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R5S C04 N05 SING N N 1 R5S C04 C03 SING N N 2 R5S N06 N05 SING Y N 3 R5S N06 C07 DOUB Y N 4 R5S N05 C31 SING Y N 5 R5S C03 C02 SING N N 6 R5S C07 C08 SING Y N 7 R5S C21 C22 SING N N 8 R5S C21 N20 SING N N 9 R5S C31 C08 DOUB Y N 10 R5S C08 C09 SING N N 11 R5S C22 C17 SING N N 12 R5S C02 N01 TRIP N N 13 R5S N20 C19 SING N N 14 R5S C23 C24 DOUB Y N 15 R5S C23 C16 SING Y N 16 R5S C09 N10 DOUB Y N 17 R5S C09 C27 SING Y N 18 R5S C17 C16 SING N N 19 R5S C17 C18 SING N N 20 R5S C28 C27 SING N N 21 R5S C28 C29 SING N N 22 R5S C24 C13 SING Y N 23 R5S N10 C11 SING Y N 24 R5S C19 C18 SING N N 25 R5S C16 C15 DOUB Y N 26 R5S C27 C26 DOUB Y N 27 R5S C29 N30 SING N N 28 R5S C13 N12 SING N N 29 R5S C13 C14 DOUB Y N 30 R5S C11 N12 SING N N 31 R5S C11 N25 DOUB Y N 32 R5S C15 C14 SING Y N 33 R5S C26 N25 SING Y N 34 R5S C26 N30 SING N N 35 R5S N12 H1 SING N N 36 R5S C15 H2 SING N N 37 R5S C17 H3 SING N N 38 R5S C21 H4 SING N N 39 R5S C21 H5 SING N N 40 R5S C22 H6 SING N N 41 R5S C22 H7 SING N N 42 R5S C24 H8 SING N N 43 R5S C28 H9 SING N N 44 R5S C28 H10 SING N N 45 R5S C03 H11 SING N N 46 R5S C03 H12 SING N N 47 R5S C04 H13 SING N N 48 R5S C04 H14 SING N N 49 R5S C07 H15 SING N N 50 R5S C14 H16 SING N N 51 R5S C18 H17 SING N N 52 R5S C18 H18 SING N N 53 R5S C19 H19 SING N N 54 R5S C19 H20 SING N N 55 R5S C23 H21 SING N N 56 R5S C29 H22 SING N N 57 R5S C31 H23 SING N N 58 R5S N20 H24 SING N N 59 R5S C29 H26 SING N N 60 R5S N30 H25 SING N N 61 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R5S SMILES ACDLabs 12.01 "N(c2ccc(C1CCNCC1)cc2)c5nc3NCCc3c(c4cnn(CCC#N)c4)n5" R5S InChI InChI 1.03 "InChI=1S/C23H26N8/c24-9-1-13-31-15-18(14-27-31)21-20-8-12-26-22(20)30-23(29-21)28-19-4-2-16(3-5-19)17-6-10-25-11-7-17/h2-5,14-15,17,25H,1,6-8,10-13H2,(H2,26,28,29,30)" R5S InChIKey InChI 1.03 LADBWLAFXFHONI-UHFFFAOYSA-N R5S SMILES_CANONICAL CACTVS 3.385 "N#CCCn1cc(cn1)c2nc(Nc3ccc(cc3)C4CCNCC4)nc5NCCc25" R5S SMILES CACTVS 3.385 "N#CCCn1cc(cn1)c2nc(Nc3ccc(cc3)C4CCNCC4)nc5NCCc25" R5S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4c(n3)NCC4)c5cnn(c5)CCC#N" R5S SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4c(n3)NCC4)c5cnn(c5)CCC#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R5S "SYSTEMATIC NAME" ACDLabs 12.01 "3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-6,7-dihydro-5H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" R5S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[4-[2-[(4-piperidin-4-ylphenyl)amino]-6,7-dihydro-5~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]pyrazol-1-yl]propanenitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R5S "Create component" 2020-01-30 RCSB R5S "Initial release" 2021-02-17 RCSB ##