data_R61 # _chem_comp.id R61 _chem_comp.name "2-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-1lambda~6~,2-thiazolidine-1,1-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 F3 N6 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-01-30 _chem_comp.pdbx_modified_date 2021-02-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 546.608 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R61 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6VNI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R61 C20 C1 C 0 1 Y N N 48.075 -0.973 -29.659 -3.618 -1.468 1.324 C20 R61 1 R61 C21 C2 C 0 1 Y N N 48.774 -0.414 -28.602 -4.820 -1.547 0.645 C21 R61 2 R61 C24 C3 C 0 1 Y N N 48.095 -2.200 -27.156 -4.538 0.716 -0.119 C24 R61 3 R61 C26 C4 C 0 1 N N N 51.002 -1.069 -25.694 -6.675 -0.878 -2.185 C26 R61 4 R61 C28 C5 C 0 1 N N N 50.814 1.380 -25.617 -9.020 -0.435 -1.652 C28 R61 5 R61 C01 C6 C 0 1 N N N 47.358 3.151 -36.208 10.953 0.257 -1.193 C01 R61 6 R61 C03 C7 C 0 1 N N N 45.381 2.526 -35.548 9.173 0.283 0.448 C03 R61 7 R61 C04 C8 C 0 1 N N N 44.703 1.198 -35.218 7.654 0.351 0.621 C04 R61 8 R61 C05 C9 C 0 1 N N N 45.746 0.244 -34.963 7.019 -0.905 0.017 C05 R61 9 R61 C06 C10 C 0 1 N N N 46.375 -0.105 -36.208 7.416 -1.009 -1.458 C06 R61 10 R61 C07 C11 C 0 1 N N N 46.966 1.129 -36.893 8.942 -1.038 -1.570 C07 R61 11 R61 C08 C12 C 0 1 Y N N 45.278 -1.018 -34.203 5.519 -0.816 0.130 C08 R61 12 R61 C09 C13 C 0 1 Y N N 45.766 -1.186 -32.911 4.821 -1.777 0.842 C09 R61 13 R61 C11 C14 C 0 1 Y N N 45.403 -2.286 -32.152 3.444 -1.696 0.948 C11 R61 14 R61 C12 C15 C 0 1 Y N N 44.539 -3.229 -32.687 2.762 -0.652 0.339 C12 R61 15 R61 C14 C16 C 0 1 Y N N 44.619 -4.924 -30.685 0.753 0.670 0.502 C14 R61 16 R61 C16 C17 C 0 1 Y N N 45.854 -4.720 -28.764 -1.193 1.906 0.545 C16 R61 17 R61 C18 C18 C 0 1 Y N N 47.400 -2.761 -28.199 -3.332 0.791 0.565 C18 R61 18 R61 C19 C19 C 0 1 Y N N 47.386 -2.157 -29.446 -2.874 -0.304 1.286 C19 R61 19 R61 C23 C20 C 0 1 Y N N 48.768 -1.031 -27.361 -5.283 -0.453 -0.079 C23 R61 20 R61 C27 C21 C 0 1 N N N 51.796 0.148 -25.978 -7.937 -0.193 -2.743 C27 R61 21 R61 C32 C22 C 0 1 Y N N 45.459 -5.974 -28.354 -0.431 3.074 0.615 C32 R61 22 R61 C33 C23 C 0 1 N N N 45.961 -6.525 -27.024 -1.096 4.425 0.679 C33 R61 23 R61 C34 C24 C 0 1 Y N N 44.611 -6.685 -29.183 0.946 2.963 0.631 C34 R61 24 R61 C36 C25 C 0 1 Y N N 44.042 -3.068 -33.980 3.464 0.311 -0.375 C36 R61 25 R61 C37 C26 C 0 1 Y N N 44.410 -1.965 -34.744 4.841 0.230 -0.474 C37 R61 26 R61 F10 F1 F 0 1 N N N 46.622 -0.258 -32.397 5.486 -2.793 1.435 F10 R61 27 R61 F22 F2 F 0 1 N N N 49.460 0.749 -28.781 -5.545 -2.686 0.684 F22 R61 28 R61 F38 F3 F 0 1 N N N 43.899 -1.841 -36.002 5.525 1.169 -1.164 F38 R61 29 R61 N02 N1 N 0 1 N N N 46.439 2.431 -36.535 9.501 0.185 -0.980 N02 R61 30 R61 N13 N2 N 0 1 N N N 44.108 -4.413 -31.947 1.370 -0.569 0.444 N13 R61 31 R61 N15 N3 N 0 1 Y N N 45.419 -4.228 -29.909 -0.570 0.733 0.490 N15 R61 32 R61 N17 N4 N 0 1 N N N 46.723 -3.997 -27.872 -2.577 1.969 0.526 N17 R61 33 R61 N25 N5 N 0 1 N N N 49.516 -0.504 -26.245 -6.498 -0.532 -0.767 N25 R61 34 R61 N35 N6 N 0 1 Y N N 44.227 -6.127 -30.326 1.500 1.762 0.574 N35 R61 35 R61 O30 O1 O 0 1 N N N 49.232 0.121 -24.013 -7.988 1.101 0.310 O30 R61 36 R61 O31 O2 O 0 1 N N N 48.190 1.419 -25.966 -8.244 -1.325 0.773 O31 R61 37 R61 S29 S1 S 0 1 N N N 49.271 0.608 -25.392 -8.015 -0.250 -0.128 S29 R61 38 R61 H1 H1 H 0 1 N N N 48.067 -0.497 -30.628 -3.262 -2.317 1.890 H1 R61 39 R61 H2 H2 H 0 1 N N N 48.109 -2.677 -26.187 -4.895 1.567 -0.680 H2 R61 40 R61 H3 H3 H 0 1 N N N 51.355 -1.941 -26.265 -6.777 -1.959 -2.283 H3 R61 41 R61 H4 H4 H 0 1 N N N 50.984 -1.315 -24.622 -5.804 -0.544 -2.749 H4 R61 42 R61 H6 H6 H 0 1 N N N 51.139 1.887 -24.696 -9.803 0.322 -1.701 H6 R61 43 R61 H7 H7 H 0 1 N N N 50.774 2.107 -26.441 -9.439 -1.438 -1.728 H7 R61 44 R61 H8 H8 H 0 1 N N N 48.163 3.081 -36.955 11.438 -0.565 -0.665 H8 R61 45 R61 H9 H9 H 0 1 N N N 47.005 4.191 -36.146 11.168 0.182 -2.259 H9 R61 46 R61 H10 H10 H 0 1 N N N 47.740 2.834 -35.226 11.329 1.206 -0.812 H10 R61 47 R61 H11 H11 H 0 1 N N N 44.615 3.217 -35.930 9.626 1.183 0.864 H11 R61 48 R61 H12 H12 H 0 1 N N N 45.811 2.932 -34.621 9.559 -0.593 0.970 H12 R61 49 R61 H13 H13 H 0 1 N N N 44.068 1.310 -34.327 7.410 0.408 1.681 H13 R61 50 R61 H14 H14 H 0 1 N N N 44.088 0.867 -36.068 7.269 1.234 0.110 H14 R61 51 R61 H15 H15 H 0 1 N N N 46.501 0.731 -34.328 7.374 -1.786 0.553 H15 R61 52 R61 H16 H16 H 0 1 N N N 47.181 -0.828 -36.013 7.003 -1.924 -1.883 H16 R61 53 R61 H17 H17 H 0 1 N N N 45.627 -0.561 -36.873 7.028 -0.148 -2.001 H17 R61 54 R61 H18 H18 H 0 1 N N N 48.043 1.141 -36.670 9.329 -1.908 -1.039 H18 R61 55 R61 H19 H19 H 0 1 N N N 46.817 1.004 -37.976 9.228 -1.098 -2.620 H19 R61 56 R61 H20 H20 H 0 1 N N N 45.790 -2.408 -31.151 2.900 -2.446 1.503 H20 R61 57 R61 H21 H21 H 0 1 N N N 46.835 -2.611 -30.256 -1.936 -0.246 1.817 H21 R61 58 R61 H22 H22 H 0 1 N N N 52.699 0.176 -25.350 -7.764 0.874 -2.879 H22 R61 59 R61 H23 H23 H 0 1 N N N 52.086 0.182 -27.039 -8.236 -0.655 -3.685 H23 R61 60 R61 H24 H24 H 0 1 N N N 45.263 -6.242 -26.222 -1.268 4.696 1.721 H24 R61 61 R61 H25 H25 H 0 1 N N N 46.027 -7.621 -27.083 -0.452 5.170 0.212 H25 R61 62 R61 H26 H26 H 0 1 N N N 46.956 -6.109 -26.807 -2.049 4.386 0.152 H26 R61 63 R61 H27 H27 H 0 1 N N N 44.269 -7.672 -28.908 1.564 3.847 0.685 H27 R61 64 R61 H28 H28 H 0 1 N N N 43.367 -3.804 -34.391 2.935 1.124 -0.850 H28 R61 65 R61 H30 H30 H 0 1 N N N 43.366 -4.940 -32.362 0.837 -1.379 0.475 H30 R61 66 R61 H31 H31 H 0 1 N N N 46.869 -4.377 -26.959 -3.023 2.829 0.487 H31 R61 67 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R61 C20 C21 DOUB Y N 1 R61 C20 C19 SING Y N 2 R61 C21 C23 SING Y N 3 R61 C21 F22 SING N N 4 R61 C24 C18 SING Y N 5 R61 C24 C23 DOUB Y N 6 R61 C26 C27 SING N N 7 R61 C28 C27 SING N N 8 R61 C28 S29 SING N N 9 R61 C01 N02 SING N N 10 R61 C03 C04 SING N N 11 R61 C03 N02 SING N N 12 R61 C04 C05 SING N N 13 R61 C05 C06 SING N N 14 R61 C05 C08 SING N N 15 R61 C06 C07 SING N N 16 R61 C07 N02 SING N N 17 R61 C08 C09 DOUB Y N 18 R61 C08 C37 SING Y N 19 R61 C09 C11 SING Y N 20 R61 C09 F10 SING N N 21 R61 C11 C12 DOUB Y N 22 R61 C12 C36 SING Y N 23 R61 C12 N13 SING N N 24 R61 C14 N13 SING N N 25 R61 C14 N15 DOUB Y N 26 R61 C14 N35 SING Y N 27 R61 C16 C32 DOUB Y N 28 R61 C16 N15 SING Y N 29 R61 C16 N17 SING N N 30 R61 C18 C19 DOUB Y N 31 R61 C18 N17 SING N N 32 R61 C23 N25 SING N N 33 R61 C32 C33 SING N N 34 R61 C32 C34 SING Y N 35 R61 C34 N35 DOUB Y N 36 R61 C36 C37 DOUB Y N 37 R61 C37 F38 SING N N 38 R61 N25 S29 SING N N 39 R61 O30 S29 DOUB N N 40 R61 O31 S29 DOUB N N 41 R61 C20 H1 SING N N 42 R61 C24 H2 SING N N 43 R61 C26 H3 SING N N 44 R61 C26 H4 SING N N 45 R61 C28 H6 SING N N 46 R61 C28 H7 SING N N 47 R61 C01 H8 SING N N 48 R61 C01 H9 SING N N 49 R61 C01 H10 SING N N 50 R61 C03 H11 SING N N 51 R61 C03 H12 SING N N 52 R61 C04 H13 SING N N 53 R61 C04 H14 SING N N 54 R61 C05 H15 SING N N 55 R61 C06 H16 SING N N 56 R61 C06 H17 SING N N 57 R61 C07 H18 SING N N 58 R61 C07 H19 SING N N 59 R61 C11 H20 SING N N 60 R61 C19 H21 SING N N 61 R61 C27 H22 SING N N 62 R61 C27 H23 SING N N 63 R61 C33 H24 SING N N 64 R61 C33 H25 SING N N 65 R61 C33 H26 SING N N 66 R61 C34 H27 SING N N 67 R61 C36 H28 SING N N 68 R61 N13 H30 SING N N 69 R61 N17 H31 SING N N 70 R61 C26 N25 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R61 SMILES ACDLabs 12.01 "c1c(c(cc(c1)Nc4c(C)cnc(Nc3cc(c(C2CCN(C)CC2)c(c3)F)F)n4)N5CCCS5(=O)=O)F" R61 InChI InChI 1.03 "InChI=1S/C26H29F3N6O2S/c1-16-15-30-26(32-19-12-21(28)24(22(29)13-19)17-6-9-34(2)10-7-17)33-25(16)31-18-4-5-20(27)23(14-18)35-8-3-11-38(35,36)37/h4-5,12-15,17H,3,6-11H2,1-2H3,(H2,30,31,32,33)" R61 InChIKey InChI 1.03 YFAXWSXYQLAMER-UHFFFAOYSA-N R61 SMILES_CANONICAL CACTVS 3.385 "CN1CCC(CC1)c2c(F)cc(Nc3ncc(C)c(Nc4ccc(F)c(c4)N5CCC[S]5(=O)=O)n3)cc2F" R61 SMILES CACTVS 3.385 "CN1CCC(CC1)c2c(F)cc(Nc3ncc(C)c(Nc4ccc(F)c(c4)N5CCC[S]5(=O)=O)n3)cc2F" R61 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cnc(nc1Nc2ccc(c(c2)N3CCCS3(=O)=O)F)Nc4cc(c(c(c4)F)C5CCN(CC5)C)F" R61 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cnc(nc1Nc2ccc(c(c2)N3CCCS3(=O)=O)F)Nc4cc(c(c(c4)F)C5CCN(CC5)C)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R61 "SYSTEMATIC NAME" ACDLabs 12.01 "2-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-1lambda~6~,2-thiazolidine-1,1-dione" R61 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}2-[3,5-bis(fluoranyl)-4-(1-methylpiperidin-4-yl)phenyl]-~{N}4-[3-[1,1-bis(oxidanylidene)-1,2-thiazolidin-2-yl]-4-fluoranyl-phenyl]-5-methyl-pyrimidine-2,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R61 "Create component" 2020-01-30 RCSB R61 "Initial release" 2021-02-17 RCSB ##