data_R6N # _chem_comp.id R6N _chem_comp.name "4-[2-(butylamino)-5-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]pyrrolo[2,3-d]pyrimidin-7-yl]cyclohexan-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H40 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-07 _chem_comp.pdbx_modified_date 2020-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.657 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R6N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AB2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R6N C1 C1 C 0 1 N N N 25.801 14.526 21.830 6.001 7.597 -0.214 C1 R6N 1 R6N C2 C2 C 0 1 N N N 25.973 14.220 20.352 4.715 6.788 -0.036 C2 R6N 2 R6N C3 C3 C 0 1 N N N 24.855 14.803 19.472 5.032 5.295 -0.145 C3 R6N 3 R6N N6 N1 N 0 1 N N N 25.425 24.623 10.473 -8.020 0.885 -1.257 N6 R6N 4 R6N C7 C4 C 0 1 Y N N 27.759 17.186 14.279 1.116 -1.933 0.216 C7 R6N 5 R6N C8 C5 C 0 1 Y N N 26.615 17.855 13.935 0.261 -0.897 0.396 C8 R6N 6 R6N C9 C6 C 0 1 Y N N 25.715 17.767 15.044 1.066 0.330 0.311 C9 R6N 7 R6N C10 C7 C 0 1 Y N N 24.424 18.202 15.372 0.798 1.692 0.408 C10 R6N 8 R6N C11 C8 C 0 1 Y N N 26.331 18.546 12.668 -1.200 -0.984 0.631 C11 R6N 9 R6N C12 C9 C 0 1 Y N N 25.408 19.586 12.634 -1.998 -1.764 -0.205 C12 R6N 10 R6N C13 C10 C 0 1 Y N N 25.129 20.245 11.452 -3.358 -1.841 0.019 C13 R6N 11 R6N C14 C11 C 0 1 Y N N 25.766 19.883 10.271 -3.929 -1.148 1.071 C14 R6N 12 R6N C15 C12 C 0 1 Y N N 26.691 18.842 10.302 -3.142 -0.373 1.904 C15 R6N 13 R6N C16 C13 C 0 1 Y N N 26.971 18.181 11.487 -1.781 -0.292 1.693 C16 R6N 14 R6N C19 C14 C 0 1 N N N 24.206 24.069 9.882 -6.606 0.784 -1.643 C19 R6N 15 R6N C20 C15 C 0 1 N N N 26.582 24.152 9.714 -8.154 1.100 0.191 C20 R6N 16 R6N C21 C16 C 0 1 N N N 26.639 22.639 9.700 -7.506 -0.067 0.939 C21 R6N 17 R6N C22 C17 C 0 1 N N N 25.376 26.090 10.501 -8.697 1.949 -2.011 C22 R6N 18 R6N C24 C18 C 0 1 N N N 29.483 16.776 17.184 3.770 -3.217 1.007 C24 R6N 19 R6N C27 C19 C 0 1 N N N 29.243 13.864 17.571 4.606 -4.005 -1.688 C27 R6N 20 R6N C4 C20 C 0 1 N N N 24.615 16.281 19.742 3.747 4.485 0.033 C4 R6N 21 R6N N1 N2 N 0 1 N N N 23.971 16.960 18.619 4.051 3.056 -0.072 N1 R6N 22 R6N C5 C21 C 0 1 Y N N 24.576 17.214 17.438 3.037 2.121 0.057 C5 R6N 23 R6N N2 N3 N 0 1 Y N N 25.814 16.738 17.254 3.339 0.837 -0.041 N2 R6N 24 R6N C6 C22 C 0 1 Y N N 26.355 17.029 16.052 2.392 -0.089 0.078 C6 R6N 25 R6N N3 N4 N 0 1 Y N N 27.610 16.681 15.564 2.385 -1.457 0.026 N3 R6N 26 R6N N4 N5 N 0 1 Y N N 23.872 17.928 16.545 1.799 2.546 0.277 N4 R6N 27 R6N C17 C23 C 0 1 N N N 25.456 20.611 8.978 -5.415 -1.232 1.307 C17 R6N 28 R6N N5 N6 N 0 1 N N N 25.414 22.082 9.118 -6.092 -0.169 0.553 N5 R6N 29 R6N C18 C24 C 0 1 N N N 24.251 22.560 9.876 -5.958 -0.384 -0.895 C18 R6N 30 R6N C23 C25 C 0 1 N N N 28.667 15.907 16.234 3.568 -2.292 -0.194 C23 R6N 31 R6N C25 C26 C 0 1 N N N 30.609 15.963 17.798 5.006 -4.090 0.777 C25 R6N 32 R6N C26 C27 C 0 1 N N N 30.072 14.734 18.498 4.808 -4.930 -0.486 C26 R6N 33 R6N C28 C28 C 0 1 N N N 28.117 14.650 16.906 3.371 -3.132 -1.458 C28 R6N 34 R6N O1 O1 O 0 1 N N N 31.167 13.984 19.009 5.963 -5.745 -0.701 O1 R6N 35 R6N H1 H1 H 0 1 N N N 26.632 14.081 22.396 6.429 7.388 -1.194 H1 R6N 36 R6N H2 H2 H 0 1 N N N 25.797 15.616 21.981 5.774 8.661 -0.136 H2 R6N 37 R6N H3 H3 H 0 1 N N N 24.849 14.103 22.183 6.715 7.320 0.561 H3 R6N 38 R6N H4 H4 H 0 1 N N N 25.985 13.128 20.221 4.286 6.997 0.945 H4 R6N 39 R6N H5 H5 H 0 1 N N N 26.933 14.640 20.019 4.000 7.065 -0.811 H5 R6N 40 R6N H6 H6 H 0 1 N N N 23.924 14.252 19.672 5.461 5.086 -1.125 H6 R6N 41 R6N H7 H7 H 0 1 N N N 25.135 14.678 18.416 5.747 5.018 0.630 H7 R6N 42 R6N H9 H9 H 0 1 N N N 28.632 17.070 13.654 0.838 -2.977 0.225 H9 R6N 43 R6N H10 H10 H 0 1 N N N 23.864 18.776 14.649 -0.208 2.044 0.586 H10 R6N 44 R6N H11 H11 H 0 1 N N N 24.904 19.882 13.542 -1.554 -2.305 -1.027 H11 R6N 45 R6N H12 H12 H 0 1 N N N 24.409 21.050 11.446 -3.977 -2.444 -0.628 H12 R6N 46 R6N H13 H13 H 0 1 N N N 27.195 18.547 9.393 -3.593 0.166 2.724 H13 R6N 47 R6N H14 H14 H 0 1 N N N 27.691 17.376 11.494 -1.167 0.313 2.344 H14 R6N 48 R6N H15 H15 H 0 1 N N N 24.110 24.431 8.848 -6.534 0.613 -2.717 H15 R6N 49 R6N H16 H16 H 0 1 N N N 23.337 24.402 10.469 -6.092 1.710 -1.387 H16 R6N 50 R6N H17 H17 H 0 1 N N N 27.500 24.543 10.177 -7.657 2.030 0.468 H17 R6N 51 R6N H18 H18 H 0 1 N N N 26.508 24.519 8.680 -9.210 1.160 0.454 H18 R6N 52 R6N H19 H19 H 0 1 N N N 26.749 22.272 10.731 -7.578 0.104 2.013 H19 R6N 53 R6N H20 H20 H 0 1 N N N 27.503 22.315 9.101 -8.020 -0.994 0.683 H20 R6N 54 R6N H21 H21 H 0 1 N N N 24.498 26.417 11.077 -8.641 1.730 -3.078 H21 R6N 55 R6N H22 H22 H 0 1 N N N 26.290 26.478 10.974 -9.742 2.002 -1.706 H22 R6N 56 R6N H23 H23 H 0 1 N N N 25.304 26.474 9.473 -8.210 2.903 -1.810 H23 R6N 57 R6N H24 H24 H 0 1 N N N 29.908 17.624 16.627 3.911 -2.619 1.907 H24 R6N 58 R6N H25 H25 H 0 1 N N N 28.829 17.154 17.984 2.893 -3.854 1.127 H25 R6N 59 R6N H26 H26 H 0 1 N N N 28.805 13.040 18.154 5.483 -3.368 -1.808 H26 R6N 60 R6N H27 H27 H 0 1 N N N 29.899 13.452 16.790 4.466 -4.603 -2.588 H27 R6N 61 R6N H28 H28 H 0 1 N N N 25.583 16.765 19.938 3.318 4.695 1.013 H28 R6N 62 R6N H29 H29 H 0 1 N N N 23.971 16.377 20.628 3.032 4.763 -0.742 H29 R6N 63 R6N H30 H30 H 0 1 N N N 23.681 17.850 18.971 4.962 2.765 -0.231 H30 R6N 64 R6N H31 H31 H 0 1 N N N 24.476 20.269 8.614 -5.781 -2.203 0.975 H31 R6N 65 R6N H32 H32 H 0 1 N N N 26.231 20.355 8.241 -5.621 -1.111 2.371 H32 R6N 66 R6N H34 H34 H 0 1 N N N 23.332 22.173 9.411 -6.455 -1.313 -1.172 H34 R6N 67 R6N H35 H35 H 0 1 N N N 24.320 22.196 10.912 -4.902 -0.443 -1.158 H35 R6N 68 R6N H36 H36 H 0 1 N N N 29.361 15.564 15.452 4.445 -1.656 -0.315 H36 R6N 69 R6N H37 H37 H 0 1 N N N 31.302 15.650 17.003 5.883 -3.453 0.657 H37 R6N 70 R6N H38 H38 H 0 1 N N N 31.146 16.587 18.528 5.150 -4.749 1.633 H38 R6N 71 R6N H39 H39 H 0 1 N N N 29.430 15.062 19.329 3.932 -5.566 -0.366 H39 R6N 72 R6N H40 H40 H 0 1 N N N 27.379 14.940 17.668 3.227 -2.473 -2.314 H40 R6N 73 R6N H41 H41 H 0 1 N N N 27.632 14.017 16.148 2.494 -3.769 -1.337 H41 R6N 74 R6N H42 H42 H 0 1 N N N 31.683 14.532 19.589 6.152 -6.358 0.022 H42 R6N 75 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R6N C17 N5 SING N N 1 R6N C17 C14 SING N N 2 R6N N5 C21 SING N N 3 R6N N5 C18 SING N N 4 R6N C21 C20 SING N N 5 R6N C20 N6 SING N N 6 R6N C18 C19 SING N N 7 R6N C19 N6 SING N N 8 R6N C14 C15 DOUB Y N 9 R6N C14 C13 SING Y N 10 R6N C15 C16 SING Y N 11 R6N N6 C22 SING N N 12 R6N C13 C12 DOUB Y N 13 R6N C16 C11 DOUB Y N 14 R6N C12 C11 SING Y N 15 R6N C11 C8 SING N N 16 R6N C8 C7 DOUB Y N 17 R6N C8 C9 SING Y N 18 R6N C7 N3 SING Y N 19 R6N C9 C10 DOUB Y N 20 R6N C9 C6 SING Y N 21 R6N C10 N4 SING Y N 22 R6N N3 C6 SING Y N 23 R6N N3 C23 SING N N 24 R6N C6 N2 DOUB Y N 25 R6N C23 C28 SING N N 26 R6N C23 C24 SING N N 27 R6N N4 C5 DOUB Y N 28 R6N C28 C27 SING N N 29 R6N C24 C25 SING N N 30 R6N N2 C5 SING Y N 31 R6N C5 N1 SING N N 32 R6N C27 C26 SING N N 33 R6N C25 C26 SING N N 34 R6N C26 O1 SING N N 35 R6N N1 C4 SING N N 36 R6N C3 C4 SING N N 37 R6N C3 C2 SING N N 38 R6N C2 C1 SING N N 39 R6N C1 H1 SING N N 40 R6N C1 H2 SING N N 41 R6N C1 H3 SING N N 42 R6N C2 H4 SING N N 43 R6N C2 H5 SING N N 44 R6N C3 H6 SING N N 45 R6N C3 H7 SING N N 46 R6N C7 H9 SING N N 47 R6N C10 H10 SING N N 48 R6N C12 H11 SING N N 49 R6N C13 H12 SING N N 50 R6N C15 H13 SING N N 51 R6N C16 H14 SING N N 52 R6N C19 H15 SING N N 53 R6N C19 H16 SING N N 54 R6N C20 H17 SING N N 55 R6N C20 H18 SING N N 56 R6N C21 H19 SING N N 57 R6N C21 H20 SING N N 58 R6N C22 H21 SING N N 59 R6N C22 H22 SING N N 60 R6N C22 H23 SING N N 61 R6N C24 H24 SING N N 62 R6N C24 H25 SING N N 63 R6N C27 H26 SING N N 64 R6N C27 H27 SING N N 65 R6N C4 H28 SING N N 66 R6N C4 H29 SING N N 67 R6N N1 H30 SING N N 68 R6N C17 H31 SING N N 69 R6N C17 H32 SING N N 70 R6N C18 H34 SING N N 71 R6N C18 H35 SING N N 72 R6N C23 H36 SING N N 73 R6N C25 H37 SING N N 74 R6N C25 H38 SING N N 75 R6N C26 H39 SING N N 76 R6N C28 H40 SING N N 77 R6N C28 H41 SING N N 78 R6N O1 H42 SING N N 79 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R6N InChI InChI 1.03 "InChI=1S/C28H40N6O/c1-3-4-13-29-28-30-18-25-26(20-34(27(25)31-28)23-9-11-24(35)12-10-23)22-7-5-21(6-8-22)19-33-16-14-32(2)15-17-33/h5-8,18,20,23-24,35H,3-4,9-17,19H2,1-2H3,(H,29,30,31)/t23-,24-" R6N InChIKey InChI 1.03 MJSHVHLADKXCML-RQNOJGIXSA-N R6N SMILES_CANONICAL CACTVS 3.385 "CCCCNc1ncc2c(n1)n(cc2c3ccc(CN4CCN(C)CC4)cc3)[C@@H]5CC[C@@H](O)CC5" R6N SMILES CACTVS 3.385 "CCCCNc1ncc2c(n1)n(cc2c3ccc(CN4CCN(C)CC4)cc3)[CH]5CC[CH](O)CC5" R6N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCNc1ncc2c(cn(c2n1)C3CCC(CC3)O)c4ccc(cc4)CN5CCN(CC5)C" R6N SMILES "OpenEye OEToolkits" 2.0.7 "CCCCNc1ncc2c(cn(c2n1)C3CCC(CC3)O)c4ccc(cc4)CN5CCN(CC5)C" # _pdbx_chem_comp_identifier.comp_id R6N _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[2-(butylamino)-5-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]pyrrolo[2,3-d]pyrimidin-7-yl]cyclohexan-1-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R6N "Create component" 2020-09-07 PDBE R6N "Initial release" 2020-10-28 RCSB ##