data_R6P # _chem_comp.id R6P _chem_comp.name "(3S)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 N8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-02-03 _chem_comp.pdbx_modified_date 2021-02-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.607 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R6P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6VNB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R6P C13 C1 C 0 1 Y N N 47.244 -2.252 -27.959 -3.413 0.220 -0.414 C13 R6P 1 R6P C15 C2 C 0 1 Y N N 46.101 -3.877 -29.685 -1.145 1.228 0.130 C15 R6P 2 R6P C17 C3 C 0 1 Y N N 44.799 -4.880 -31.232 0.865 0.111 0.373 C17 R6P 3 R6P C20 C4 C 0 1 Y N N 44.969 -2.629 -33.284 3.637 -1.990 1.349 C20 R6P 4 R6P C21 C5 C 0 1 Y N N 45.092 -1.714 -34.284 5.015 -2.037 1.274 C21 R6P 5 R6P C22 C6 C 0 1 Y N N 44.484 -1.909 -35.505 5.688 -1.227 0.377 C22 R6P 6 R6P C24 C7 C 0 1 N N N 43.315 -0.434 -36.482 7.771 0.100 0.613 C24 R6P 7 R6P C28 C8 C 0 1 N N N 45.319 -0.816 -37.957 7.615 -1.693 -1.115 C28 R6P 8 R6P C02 C9 C 0 1 N N N 46.258 -0.605 -25.643 -6.773 -1.615 -2.440 C02 R6P 9 R6P C03 C10 C 0 1 N N N 47.248 0.361 -26.254 -5.557 -0.937 -1.962 C03 R6P 10 R6P C04 C11 C 0 1 N N S 48.349 -0.294 -27.053 -5.872 -0.169 -0.677 C04 R6P 11 R6P C05 C12 C 0 1 N N N 49.254 -1.059 -26.113 -6.246 -1.158 0.429 C05 R6P 12 R6P C06 C13 C 0 1 N N N 49.755 -0.106 -24.978 -7.484 -1.982 0.021 C06 R6P 13 R6P C07 C14 C 0 1 N N N 50.900 -0.672 -24.592 -8.328 -2.168 1.294 C07 R6P 14 R6P C08 C15 C 0 1 N N N 51.482 -1.438 -25.912 -7.573 -1.450 2.432 C08 R6P 15 R6P C09 C16 C 0 1 N N N 50.575 -1.283 -26.888 -6.696 -0.401 1.703 C09 R6P 16 R6P C12 C17 C 0 1 Y N N 47.174 -1.583 -30.001 -3.480 2.235 0.561 C12 R6P 17 R6P C14 C18 C 0 1 Y N N 46.844 -2.637 -29.218 -2.625 1.217 0.089 C14 R6P 18 R6P C19 C19 C 0 1 Y N N 44.282 -3.792 -33.479 2.926 -1.132 0.520 C19 R6P 19 R6P C23 C20 C 0 1 N N N 44.723 -0.826 -36.613 7.192 -1.281 0.297 C23 R6P 20 R6P C25 C21 C 0 1 N N N 42.819 0.509 -37.568 9.294 0.055 0.472 C25 R6P 21 R6P C27 C22 C 0 1 N N N 44.721 0.133 -38.976 9.144 -1.686 -1.207 C27 R6P 22 R6P C29 C23 C 0 1 Y N N 43.832 -3.114 -35.703 4.984 -0.368 -0.446 C29 R6P 23 R6P C30 C24 C 0 1 Y N N 43.715 -4.010 -34.689 3.605 -0.319 -0.379 C30 R6P 24 R6P C32 C25 C 0 1 Y N N 45.223 -6.101 -29.364 0.978 2.385 0.006 C32 R6P 25 R6P C33 C26 C 0 1 Y N N 45.955 -5.053 -28.917 -0.429 2.424 -0.042 C33 R6P 26 R6P C34 C27 C 0 1 Y N N 46.392 -5.489 -27.688 -0.790 3.821 -0.276 C34 R6P 27 R6P C35 C28 C 0 1 Y N N 45.937 -6.743 -27.458 0.359 4.512 -0.353 C35 R6P 28 R6P N01 N1 N 0 1 N N N 45.545 -1.311 -25.208 -7.711 -2.138 -2.809 N01 R6P 29 R6P N10 N2 N 0 1 Y N N 47.779 -1.112 -28.075 -4.696 0.601 -0.267 N10 R6P 30 R6P N11 N3 N 0 1 Y N N 47.726 -0.698 -29.266 -4.712 1.860 0.346 N11 R6P 31 R6P N16 N4 N 0 1 Y N N 45.480 -3.840 -30.834 -0.461 0.104 0.335 N16 R6P 32 R6P N18 N5 N 0 1 N N N 44.138 -4.811 -32.490 1.531 -1.086 0.590 N18 R6P 33 R6P N26 N6 N 0 1 N N N 43.265 0.113 -38.910 9.648 -0.342 -0.897 N26 R6P 34 R6P N31 N7 N 0 1 Y N N 44.643 -5.979 -30.573 1.576 1.214 0.211 N31 R6P 35 R6P N36 N8 N 0 1 Y N N 45.240 -7.073 -28.467 1.424 3.664 -0.186 N36 R6P 36 R6P H1 H1 H 0 1 N N N 47.124 -2.816 -27.046 -3.069 -0.704 -0.855 H1 R6P 37 R6P H2 H2 H 0 1 N N N 45.421 -2.432 -32.323 3.112 -2.623 2.049 H2 R6P 38 R6P H3 H3 H 0 1 N N N 45.676 -0.821 -34.118 5.568 -2.707 1.915 H3 R6P 39 R6P H4 H4 H 0 1 N N N 43.186 0.064 -35.510 7.363 0.834 -0.082 H4 R6P 40 R6P H5 H5 H 0 1 N N N 42.700 -1.346 -36.512 7.508 0.381 1.633 H5 R6P 41 R6P H6 H6 H 0 1 N N N 45.233 -1.834 -38.364 7.241 -2.694 -1.330 H6 R6P 42 R6P H7 H7 H 0 1 N N N 46.381 -0.554 -37.845 7.203 -0.988 -1.838 H7 R6P 43 R6P H8 H8 H 0 1 N N N 47.711 0.939 -25.441 -4.782 -1.678 -1.762 H8 R6P 44 R6P H9 H9 H 0 1 N N N 46.698 1.041 -26.920 -5.205 -0.241 -2.724 H9 R6P 45 R6P H10 H10 H 0 1 N N N 48.945 0.502 -27.523 -6.707 0.509 -0.855 H10 R6P 46 R6P H11 H11 H 0 1 N N N 48.812 -1.990 -25.729 -5.405 -1.816 0.651 H11 R6P 47 R6P H12 H12 H 0 1 N N N 49.927 0.910 -25.363 -8.059 -1.444 -0.733 H12 R6P 48 R6P H13 H13 H 0 1 N N N 49.034 -0.067 -24.148 -7.175 -2.953 -0.367 H13 R6P 49 R6P H14 H14 H 0 1 N N N 50.717 -1.392 -23.780 -9.312 -1.721 1.158 H14 R6P 50 R6P H15 H15 H 0 1 N N N 51.610 0.095 -24.249 -8.429 -3.229 1.523 H15 R6P 51 R6P H16 H16 H 0 1 N N N 51.625 -2.507 -25.696 -8.275 -0.959 3.105 H16 R6P 52 R6P H17 H17 H 0 1 N N N 52.442 -0.993 -26.214 -6.949 -2.156 2.981 H17 R6P 53 R6P H18 H18 H 0 1 N N N 50.515 -2.183 -27.517 -5.836 -0.125 2.313 H18 R6P 54 R6P H19 H19 H 0 1 N N N 50.816 -0.412 -27.516 -7.284 0.479 1.442 H19 R6P 55 R6P H20 H20 H 0 1 N N N 47.000 -1.505 -31.064 -3.170 3.161 1.021 H20 R6P 56 R6P H21 H21 H 0 1 N N N 45.269 -0.037 -36.075 7.570 -2.008 1.017 H21 R6P 57 R6P H22 H22 H 0 1 N N N 43.197 1.520 -37.356 9.708 1.041 0.682 H22 R6P 58 R6P H23 H23 H 0 1 N N N 41.719 0.518 -37.551 9.703 -0.669 1.177 H23 R6P 59 R6P H24 H24 H 0 1 N N N 45.041 -0.172 -39.984 9.553 -2.401 -0.494 H24 R6P 60 R6P H25 H25 H 0 1 N N N 45.077 1.153 -38.771 9.448 -1.964 -2.216 H25 R6P 61 R6P H26 H26 H 0 1 N N N 43.413 -3.343 -36.672 5.512 0.264 -1.145 H26 R6P 62 R6P H27 H27 H 0 1 N N N 43.156 -4.919 -34.852 3.056 0.352 -1.022 H27 R6P 63 R6P H28 H28 H 0 1 N N N 47.006 -4.917 -27.008 -1.789 4.221 -0.370 H28 R6P 64 R6P H29 H29 H 0 1 N N N 46.130 -7.347 -26.584 0.433 5.576 -0.522 H29 R6P 65 R6P H30 H30 H 0 1 N N N 43.505 -5.555 -32.704 1.028 -1.891 0.791 H30 R6P 66 R6P H31 H31 H 0 1 N N N 42.894 0.751 -39.584 10.645 -0.287 -1.043 H31 R6P 67 R6P H33 H33 H 0 1 N N N 44.768 -7.949 -28.569 2.356 3.931 -0.201 H33 R6P 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R6P C27 N26 SING N N 1 R6P C27 C28 SING N N 2 R6P N26 C25 SING N N 3 R6P C28 C23 SING N N 4 R6P C25 C24 SING N N 5 R6P C23 C24 SING N N 6 R6P C23 C22 SING N N 7 R6P C29 C22 DOUB Y N 8 R6P C29 C30 SING Y N 9 R6P C22 C21 SING Y N 10 R6P C30 C19 DOUB Y N 11 R6P C21 C20 DOUB Y N 12 R6P C19 C20 SING Y N 13 R6P C19 N18 SING N N 14 R6P N18 C17 SING N N 15 R6P C17 N16 DOUB Y N 16 R6P C17 N31 SING Y N 17 R6P N16 C15 SING Y N 18 R6P N31 C32 DOUB Y N 19 R6P C12 N11 DOUB Y N 20 R6P C12 C14 SING Y N 21 R6P C15 C14 SING N N 22 R6P C15 C33 DOUB Y N 23 R6P C32 C33 SING Y N 24 R6P C32 N36 SING Y N 25 R6P N11 N10 SING Y N 26 R6P C14 C13 DOUB Y N 27 R6P C33 C34 SING Y N 28 R6P N36 C35 SING Y N 29 R6P N10 C13 SING Y N 30 R6P N10 C04 SING N N 31 R6P C34 C35 DOUB Y N 32 R6P C04 C03 SING N N 33 R6P C04 C05 SING N N 34 R6P C09 C05 SING N N 35 R6P C09 C08 SING N N 36 R6P C03 C02 SING N N 37 R6P C05 C06 SING N N 38 R6P C08 C07 SING N N 39 R6P C02 N01 TRIP N N 40 R6P C06 C07 SING N N 41 R6P C13 H1 SING N N 42 R6P C20 H2 SING N N 43 R6P C21 H3 SING N N 44 R6P C24 H4 SING N N 45 R6P C24 H5 SING N N 46 R6P C28 H6 SING N N 47 R6P C28 H7 SING N N 48 R6P C03 H8 SING N N 49 R6P C03 H9 SING N N 50 R6P C04 H10 SING N N 51 R6P C05 H11 SING N N 52 R6P C06 H12 SING N N 53 R6P C06 H13 SING N N 54 R6P C07 H14 SING N N 55 R6P C07 H15 SING N N 56 R6P C08 H16 SING N N 57 R6P C08 H17 SING N N 58 R6P C09 H18 SING N N 59 R6P C09 H19 SING N N 60 R6P C12 H20 SING N N 61 R6P C23 H21 SING N N 62 R6P C25 H22 SING N N 63 R6P C25 H23 SING N N 64 R6P C27 H24 SING N N 65 R6P C27 H25 SING N N 66 R6P C29 H26 SING N N 67 R6P C30 H27 SING N N 68 R6P C34 H28 SING N N 69 R6P C35 H29 SING N N 70 R6P N18 H30 SING N N 71 R6P N26 H31 SING N N 72 R6P N36 H33 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R6P SMILES ACDLabs 12.01 "c5c(c2c1c(ncc1)nc(n2)Nc4ccc(C3CCNCC3)cc4)cnn5C(CC#N)C6CCCC6" R6P InChI InChI 1.03 "InChI=1S/C28H32N8/c29-13-9-25(21-3-1-2-4-21)36-18-22(17-32-36)26-24-12-16-31-27(24)35-28(34-26)33-23-7-5-19(6-8-23)20-10-14-30-15-11-20/h5-8,12,16-18,20-21,25,30H,1-4,9-11,14-15H2,(H2,31,33,34,35)/t25-/m0/s1" R6P InChIKey InChI 1.03 RGIJZWRVCBSGJV-VWLOTQADSA-N R6P SMILES_CANONICAL CACTVS 3.385 "N#CC[C@@H](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36" R6P SMILES CACTVS 3.385 "N#CC[CH](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36" R6P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)[C@@H](CC#N)C6CCCC6" R6P SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)C(CC#N)C6CCCC6" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R6P "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" R6P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-cyclopentyl-3-[4-[2-[(4-piperidin-4-ylphenyl)amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]pyrazol-1-yl]propanenitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R6P "Create component" 2020-02-03 RCSB R6P "Initial release" 2021-02-17 RCSB ##