data_R6V # _chem_comp.id R6V _chem_comp.name "(3R)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H32 N8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-02-03 _chem_comp.pdbx_modified_date 2021-02-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.607 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R6V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6VNC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R6V C13 C1 C 0 1 Y N N 32.001 -1.626 11.409 -3.533 0.399 -0.160 C13 R6V 1 R6V C15 C2 C 0 1 Y N N 33.362 0.109 12.912 -1.368 -0.891 -0.479 C15 R6V 2 R6V C17 C3 C 0 1 Y N N 34.868 1.232 14.274 0.790 -0.092 -0.247 C17 R6V 3 R6V C20 C4 C 0 1 Y N N 38.658 1.142 14.775 3.603 -0.270 -0.796 C20 R6V 4 R6V C21 C5 C 0 1 Y N N 39.829 0.547 14.329 4.971 -0.458 -0.744 C21 R6V 5 R6V C22 C6 C 0 1 Y N N 39.784 -0.392 13.317 5.764 0.417 -0.025 C22 R6V 6 R6V C24 C7 C 0 1 N N N 41.841 -1.600 13.972 7.693 0.018 1.484 C24 R6V 7 R6V C28 C8 C 0 1 N N N 41.830 -0.069 12.055 7.965 1.436 -0.552 C28 R6V 8 R6V C02 C9 C 0 1 N N N 31.337 -4.665 11.875 -4.958 2.993 -1.531 C02 R6V 9 R6V C03 C10 C 0 1 N N N 31.529 -4.730 10.368 -5.411 2.590 -0.189 C03 R6V 10 R6V C04 C11 C 0 1 N N R 31.439 -3.343 9.741 -5.921 1.148 -0.235 C04 R6V 11 R6V C05 C12 C 0 1 N N N 31.815 -3.405 8.252 -6.506 0.771 1.127 C05 R6V 12 R6V C06 C13 C 0 1 N N N 31.165 -2.076 7.508 -7.069 -0.665 1.094 C06 R6V 13 R6V C07 C14 C 0 1 N N N 30.546 -2.503 6.369 -8.350 -0.655 1.946 C07 R6V 14 R6V C08 C15 C 0 1 N N N 30.150 -4.018 6.643 -8.521 0.787 2.468 C08 R6V 15 R6V C09 C16 C 0 1 N N N 31.248 -4.516 7.685 -7.734 1.656 1.454 C09 R6V 16 R6V C12 C17 C 0 1 Y N N 34.185 -1.509 11.048 -3.708 -1.454 -1.404 C12 R6V 17 R6V C14 C18 C 0 1 Y N N 33.165 -0.958 11.830 -2.816 -0.648 -0.668 C14 R6V 18 R6V C19 C19 C 0 1 Y N N 37.435 0.796 14.219 3.026 0.803 -0.128 C19 R6V 19 R6V C23 C20 C 0 1 N N N 41.063 -1.070 12.828 7.255 0.209 0.030 C23 R6V 20 R6V C25 C21 C 0 1 N N N 43.185 -2.180 13.529 9.215 -0.133 1.540 C25 R6V 21 R6V C27 C22 C 0 1 N N N 43.147 -0.674 11.577 9.480 1.244 -0.437 C27 R6V 22 R6V C29 C23 C 0 1 Y N N 38.566 -0.739 12.759 5.191 1.483 0.645 C29 R6V 23 R6V C30 C24 C 0 1 Y N N 37.401 -0.149 13.206 3.825 1.680 0.593 C30 R6V 24 R6V C32 C25 C 0 1 Y N N 32.619 1.775 14.455 0.520 -2.382 -0.198 C32 R6V 25 R6V C33 C26 C 0 1 Y N N 32.301 0.848 13.489 -0.866 -2.200 -0.371 C33 R6V 26 R6V C34 C27 C 0 1 Y N N 30.898 0.927 13.341 -1.453 -3.538 -0.395 C34 R6V 27 R6V C35 C28 C 0 1 Y N N 30.428 1.893 14.223 -0.442 -4.409 -0.242 C35 R6V 28 R6V N01 N1 N 0 1 N N N 31.072 -4.631 12.970 -4.609 3.304 -2.566 N01 R6V 29 R6V N10 N2 N 0 1 Y N N 32.342 -2.472 10.461 -4.810 0.248 -0.556 N10 R6V 30 R6V N11 N3 N 0 1 Y N N 33.653 -2.417 10.237 -4.896 -0.917 -1.328 N11 R6V 31 R6V N16 N4 N 0 1 Y N N 34.595 0.334 13.338 -0.509 0.123 -0.411 N16 R6V 32 R6V N18 N5 N 0 1 N N N 36.236 1.462 14.724 1.643 0.999 -0.183 N18 R6V 33 R6V N26 N6 N 0 1 N N N 43.955 -1.228 12.694 9.847 1.066 0.974 N26 R6V 34 R6V N31 N7 N 0 1 Y N N 33.914 1.945 14.826 1.302 -1.306 -0.142 N31 R6V 35 R6V N36 N8 N 0 1 Y N N 31.468 2.385 14.881 0.743 -3.729 -0.123 N36 R6V 36 R6V H1 H1 H 0 1 N N N 31.004 -1.472 11.795 -3.145 1.200 0.453 H1 R6V 37 R6V H2 H2 H 0 1 N N N 38.699 1.881 15.562 2.985 -0.953 -1.358 H2 R6V 38 R6V H3 H3 H 0 1 N N N 40.776 0.818 14.773 5.421 -1.289 -1.265 H3 R6V 39 R6V H4 H4 H 0 1 N N N 42.024 -0.784 14.686 7.391 0.885 2.072 H4 R6V 40 R6V H5 H5 H 0 1 N N N 41.256 -2.392 14.463 7.223 -0.878 1.891 H5 R6V 41 R6V H6 H6 H 0 1 N N N 42.040 0.801 12.694 7.690 1.552 -1.600 H6 R6V 42 R6V H7 H7 H 0 1 N N N 41.238 0.250 11.184 7.667 2.325 0.004 H7 R6V 43 R6V H8 H8 H 0 1 N N N 30.748 -5.371 9.934 -4.579 2.659 0.511 H8 R6V 44 R6V H9 H9 H 0 1 N N N 32.518 -5.159 10.150 -6.216 3.250 0.136 H9 R6V 45 R6V H10 H10 H 0 1 N N N 30.406 -2.975 9.832 -6.693 1.059 -0.999 H10 R6V 46 R6V H11 H11 H 0 1 N N N 32.908 -3.376 8.134 -5.749 0.866 1.906 H11 R6V 47 R6V H12 H12 H 0 1 N N N 31.961 -1.360 7.256 -7.305 -0.950 0.069 H12 R6V 48 R6V H13 H13 H 0 1 N N N 30.434 -1.593 8.174 -6.344 -1.360 1.517 H13 R6V 49 R6V H14 H14 H 0 1 N N N 31.230 -2.434 5.511 -9.207 -0.934 1.334 H14 R6V 50 R6V H15 H15 H 0 1 N N N 29.647 -1.901 6.171 -8.248 -1.345 2.784 H15 R6V 51 R6V H16 H16 H 0 1 N N N 29.141 -4.087 7.074 -9.574 1.067 2.476 H16 R6V 52 R6V H17 H17 H 0 1 N N N 30.194 -4.608 5.716 -8.091 0.885 3.465 H17 R6V 53 R6V H18 H18 H 0 1 N N N 30.775 -5.134 8.462 -7.426 2.597 1.909 H18 R6V 54 R6V H19 H19 H 0 1 N N N 32.017 -5.106 7.166 -8.328 1.835 0.557 H19 R6V 55 R6V H20 H20 H 0 1 N N N 35.230 -1.241 11.095 -3.455 -2.362 -1.933 H20 R6V 56 R6V H21 H21 H 0 1 N N N 40.785 -1.902 12.165 7.522 -0.674 -0.550 H21 R6V 57 R6V H22 H22 H 0 1 N N N 43.002 -3.095 12.946 9.530 -0.255 2.576 H22 R6V 58 R6V H23 H23 H 0 1 N N N 43.777 -2.427 14.423 9.514 -1.008 0.963 H23 R6V 59 R6V H24 H24 H 0 1 N N N 42.926 -1.483 10.866 9.779 0.362 -1.003 H24 R6V 60 R6V H25 H25 H 0 1 N N N 43.732 0.108 11.072 9.988 2.122 -0.837 H25 R6V 61 R6V H26 H26 H 0 1 N N N 38.527 -1.475 11.970 5.813 2.165 1.206 H26 R6V 62 R6V H27 H27 H 0 1 N N N 36.456 -0.426 12.763 3.379 2.513 1.116 H27 R6V 63 R6V H28 H28 H 0 1 N N N 30.297 0.340 12.662 -2.499 -3.779 -0.511 H28 R6V 64 R6V H29 H29 H 0 1 N N N 29.397 2.190 14.350 -0.548 -5.484 -0.216 H29 R6V 65 R6V H30 H30 H 0 1 N N N 36.366 2.140 15.447 1.280 1.899 -0.177 H30 R6V 66 R6V H31 H31 H 0 1 N N N 44.747 -1.704 12.312 10.850 1.033 1.085 H31 R6V 67 R6V H33 H33 H 0 1 N N N 31.420 3.095 15.583 1.612 -4.143 -0.004 H33 R6V 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R6V C07 C08 SING N N 1 R6V C07 C06 SING N N 2 R6V C08 C09 SING N N 3 R6V C06 C05 SING N N 4 R6V C09 C05 SING N N 5 R6V C05 C04 SING N N 6 R6V C04 C03 SING N N 7 R6V C04 N10 SING N N 8 R6V N11 N10 SING Y N 9 R6V N11 C12 DOUB Y N 10 R6V C03 C02 SING N N 11 R6V N10 C13 SING Y N 12 R6V C12 C14 SING Y N 13 R6V C13 C14 DOUB Y N 14 R6V C27 C28 SING N N 15 R6V C27 N26 SING N N 16 R6V C14 C15 SING N N 17 R6V C02 N01 TRIP N N 18 R6V C28 C23 SING N N 19 R6V N26 C25 SING N N 20 R6V C29 C30 DOUB Y N 21 R6V C29 C22 SING Y N 22 R6V C23 C22 SING N N 23 R6V C23 C24 SING N N 24 R6V C15 N16 DOUB Y N 25 R6V C15 C33 SING Y N 26 R6V C30 C19 SING Y N 27 R6V C22 C21 DOUB Y N 28 R6V N16 C17 SING Y N 29 R6V C34 C33 SING Y N 30 R6V C34 C35 DOUB Y N 31 R6V C33 C32 DOUB Y N 32 R6V C25 C24 SING N N 33 R6V C19 N18 SING N N 34 R6V C19 C20 DOUB Y N 35 R6V C35 N36 SING Y N 36 R6V C17 N18 SING N N 37 R6V C17 N31 DOUB Y N 38 R6V C21 C20 SING Y N 39 R6V C32 N31 SING Y N 40 R6V C32 N36 SING Y N 41 R6V C13 H1 SING N N 42 R6V C20 H2 SING N N 43 R6V C21 H3 SING N N 44 R6V C24 H4 SING N N 45 R6V C24 H5 SING N N 46 R6V C28 H6 SING N N 47 R6V C28 H7 SING N N 48 R6V C03 H8 SING N N 49 R6V C03 H9 SING N N 50 R6V C04 H10 SING N N 51 R6V C05 H11 SING N N 52 R6V C06 H12 SING N N 53 R6V C06 H13 SING N N 54 R6V C07 H14 SING N N 55 R6V C07 H15 SING N N 56 R6V C08 H16 SING N N 57 R6V C08 H17 SING N N 58 R6V C09 H18 SING N N 59 R6V C09 H19 SING N N 60 R6V C12 H20 SING N N 61 R6V C23 H21 SING N N 62 R6V C25 H22 SING N N 63 R6V C25 H23 SING N N 64 R6V C27 H24 SING N N 65 R6V C27 H25 SING N N 66 R6V C29 H26 SING N N 67 R6V C30 H27 SING N N 68 R6V C34 H28 SING N N 69 R6V C35 H29 SING N N 70 R6V N18 H30 SING N N 71 R6V N26 H31 SING N N 72 R6V N36 H33 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R6V SMILES ACDLabs 12.01 "c5c(c3nc(Nc2ccc(C1CCNCC1)cc2)nc4nccc34)cnn5C(CC#N)C6CCCC6" R6V InChI InChI 1.03 "InChI=1S/C28H32N8/c29-13-9-25(21-3-1-2-4-21)36-18-22(17-32-36)26-24-12-16-31-27(24)35-28(34-26)33-23-7-5-19(6-8-23)20-10-14-30-15-11-20/h5-8,12,16-18,20-21,25,30H,1-4,9-11,14-15H2,(H2,31,33,34,35)/t25-/m1/s1" R6V InChIKey InChI 1.03 RGIJZWRVCBSGJV-RUZDIDTESA-N R6V SMILES_CANONICAL CACTVS 3.385 "N#CC[C@H](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36" R6V SMILES CACTVS 3.385 "N#CC[CH](C1CCCC1)n2cc(cn2)c3nc(Nc4ccc(cc4)C5CCNCC5)nc6[nH]ccc36" R6V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)[C@H](CC#N)C6CCCC6" R6V SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C2CCNCC2)Nc3nc(c4cc[nH]c4n3)c5cnn(c5)C(CC#N)C6CCCC6" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier R6V "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-cyclopentyl-3-[4-(2-{[4-(piperidin-4-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile" R6V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-cyclopentyl-3-[4-[2-[(4-piperidin-4-ylphenyl)amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]pyrazol-1-yl]propanenitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R6V "Create component" 2020-02-03 RCSB R6V "Initial release" 2021-02-17 RCSB ##