data_R7E # _chem_comp.id R7E _chem_comp.name "5-[3-(aminomethyl)phenyl]-~{N}-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]furan-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(5-(3'-aminomethyl)phenyl)furan-2-carboxamido-b-L-fucopyranose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-23 _chem_comp.pdbx_modified_date 2023-02-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 362.377 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R7E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BRO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R7E N1 N1 N 0 1 N N N 30.004 0.593 9.940 -1.364 -0.642 -0.089 N1 R7E 1 R7E C4 C1 C 0 1 N N S 27.445 2.358 7.175 -5.220 0.997 0.365 C4 R7E 2 R7E C5 C2 C 0 1 N N S 27.472 0.853 7.384 -4.713 -0.096 1.310 C5 R7E 3 R7E C6 C3 C 0 1 N N N 26.071 0.289 7.417 -5.094 0.257 2.749 C6 R7E 4 R7E C7 C4 C 0 1 N N N 30.265 -0.692 10.183 -0.770 -1.849 -0.008 C7 R7E 5 R7E C8 C5 C 0 1 Y N N 30.670 -1.058 11.521 0.692 -1.946 0.010 C8 R7E 6 R7E C10 C6 C 0 1 Y N N 31.344 -2.001 13.390 2.773 -2.740 0.075 C10 R7E 7 R7E C13 C7 C 0 1 Y N N 32.099 -0.197 15.801 3.948 0.837 -0.127 C13 R7E 8 R7E C15 C8 C 0 1 Y N N 31.477 1.650 17.173 6.338 0.989 -0.118 C15 R7E 9 R7E C17 C9 C 0 1 Y N N 30.416 1.229 15.018 5.296 -1.163 -0.004 C17 R7E 10 R7E C1 C10 C 0 1 N N S 29.444 0.979 8.710 -2.826 -0.544 -0.101 C1 R7E 11 R7E O5 O1 O 0 1 N N N 28.116 0.605 8.653 -3.291 -0.192 1.203 O5 R7E 12 R7E C3 C11 C 0 1 N N R 28.837 2.933 7.247 -4.783 0.668 -1.065 C3 R7E 13 R7E O3 O2 O 0 1 N N N 28.837 4.352 7.105 -5.189 1.720 -1.943 O3 R7E 14 R7E C2 C12 C 0 1 N N S 29.571 2.501 8.509 -3.258 0.530 -1.102 C2 R7E 15 R7E O2 O3 O 0 1 N N N 30.939 2.939 8.492 -2.845 0.152 -2.417 O2 R7E 16 R7E O4 O4 O 0 1 N N N 26.691 3.007 8.204 -4.671 2.258 0.754 O4 R7E 17 R7E O7 O5 O 0 1 N N N 30.165 -1.571 9.293 -1.448 -2.858 0.051 O7 R7E 18 R7E O8 O6 O 0 1 Y N N 30.748 -0.089 12.472 1.556 -0.910 -0.043 O8 R7E 19 R7E C11 C13 C 0 1 Y N N 31.115 -0.709 13.626 2.815 -1.377 -0.004 C11 R7E 20 R7E C9 C14 C 0 1 Y N N 31.032 -2.232 12.041 1.424 -3.110 0.090 C9 R7E 21 R7E C12 C15 C 0 1 Y N N 31.177 0.110 14.835 4.040 -0.554 -0.046 C12 R7E 22 R7E C16 C16 C 0 1 Y N N 30.565 2.009 16.167 6.437 -0.388 -0.032 C16 R7E 23 R7E C14 C17 C 0 1 Y N N 32.262 0.541 16.970 5.097 1.599 -0.165 C14 R7E 24 R7E C18 C18 C 0 1 N N N 33.241 -0.001 17.975 5.000 3.101 -0.259 C18 R7E 25 R7E N2 N2 N 0 1 N N N 32.751 -1.233 18.804 4.958 3.674 1.093 N2 R7E 26 R7E H1 H1 H 0 1 N N N 30.207 1.283 10.634 -0.824 0.162 -0.136 H1 R7E 27 R7E H2 H2 H 0 1 N N N 27.012 2.577 6.188 -6.308 1.042 0.412 H2 R7E 28 R7E H3 H3 H 0 1 N N N 28.038 0.381 6.567 -5.164 -1.050 1.038 H3 R7E 29 R7E H4 H4 H 0 1 N N N 26.117 -0.799 7.569 -6.178 0.331 2.830 H4 R7E 30 R7E H5 H5 H 0 1 N N N 25.509 0.751 8.242 -4.732 -0.521 3.421 H5 R7E 31 R7E H6 H6 H 0 1 N N N 25.566 0.505 6.464 -4.643 1.211 3.021 H6 R7E 32 R7E H7 H7 H 0 1 N N N 31.701 -2.731 14.101 3.622 -3.406 0.121 H7 R7E 33 R7E H8 H8 H 0 1 N N N 32.733 -1.058 15.647 2.980 1.314 -0.164 H8 R7E 34 R7E H9 H9 H 0 1 N N N 31.559 2.230 18.081 7.234 1.591 -0.148 H9 R7E 35 R7E H10 H10 H 0 1 N N N 29.693 1.513 14.268 5.374 -2.239 0.063 H10 R7E 36 R7E H11 H11 H 0 1 N N N 29.997 0.492 7.893 -3.252 -1.505 -0.392 H11 R7E 37 R7E H12 H12 H 0 1 N N N 29.397 2.512 6.399 -5.242 -0.269 -1.380 H12 R7E 38 R7E H13 H13 H 0 1 N N N 29.729 4.676 7.156 -4.945 1.577 -2.868 H13 R7E 39 R7E H14 H14 H 0 1 N N N 29.066 2.981 9.360 -2.800 1.482 -0.835 H14 R7E 40 R7E H15 H15 H 0 1 N N N 31.372 2.657 9.289 -1.888 0.046 -2.513 H15 R7E 41 R7E H16 H16 H 0 1 N N N 25.800 2.677 8.200 -4.908 2.530 1.652 H16 R7E 42 R7E H17 H17 H 0 1 N N N 31.076 -3.179 11.523 1.033 -4.115 0.151 H17 R7E 43 R7E H18 H18 H 0 1 N N N 29.969 2.902 16.284 7.408 -0.857 0.014 H18 R7E 44 R7E H19 H19 H 0 1 N N N 34.151 -0.299 17.434 5.869 3.488 -0.791 H19 R7E 45 R7E H20 H20 H 0 1 N N N 33.482 0.807 18.681 4.093 3.373 -0.798 H20 R7E 46 R7E H21 H21 H 0 1 N N N 33.470 -1.515 19.439 5.758 3.382 1.634 H21 R7E 47 R7E H22 H22 H 0 1 N N N 31.931 -0.983 19.319 4.893 4.680 1.057 H22 R7E 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R7E O3 C3 SING N N 1 R7E C4 C3 SING N N 2 R7E C4 C5 SING N N 3 R7E C4 O4 SING N N 4 R7E C3 C2 SING N N 5 R7E C5 C6 SING N N 6 R7E C5 O5 SING N N 7 R7E O2 C2 SING N N 8 R7E C2 C1 SING N N 9 R7E O5 C1 SING N N 10 R7E C1 N1 SING N N 11 R7E O7 C7 DOUB N N 12 R7E N1 C7 SING N N 13 R7E C7 C8 SING N N 14 R7E C8 C9 DOUB Y N 15 R7E C8 O8 SING Y N 16 R7E C9 C10 SING Y N 17 R7E O8 C11 SING Y N 18 R7E C10 C11 DOUB Y N 19 R7E C11 C12 SING N N 20 R7E C12 C17 DOUB Y N 21 R7E C12 C13 SING Y N 22 R7E C17 C16 SING Y N 23 R7E C13 C14 DOUB Y N 24 R7E C16 C15 DOUB Y N 25 R7E C14 C15 SING Y N 26 R7E C14 C18 SING N N 27 R7E C18 N2 SING N N 28 R7E N1 H1 SING N N 29 R7E C4 H2 SING N N 30 R7E C5 H3 SING N N 31 R7E C6 H4 SING N N 32 R7E C6 H5 SING N N 33 R7E C6 H6 SING N N 34 R7E C10 H7 SING N N 35 R7E C13 H8 SING N N 36 R7E C15 H9 SING N N 37 R7E C17 H10 SING N N 38 R7E C1 H11 SING N N 39 R7E C3 H12 SING N N 40 R7E O3 H13 SING N N 41 R7E C2 H14 SING N N 42 R7E O2 H15 SING N N 43 R7E O4 H16 SING N N 44 R7E C9 H17 SING N N 45 R7E C16 H18 SING N N 46 R7E C18 H19 SING N N 47 R7E C18 H20 SING N N 48 R7E N2 H21 SING N N 49 R7E N2 H22 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R7E InChI InChI 1.06 "InChI=1S/C18H22N2O6/c1-9-14(21)15(22)16(23)18(25-9)20-17(24)13-6-5-12(26-13)11-4-2-3-10(7-11)8-19/h2-7,9,14-16,18,21-23H,8,19H2,1H3,(H,20,24)/t9-,14+,15+,16-,18-/m0/s1" R7E InChIKey InChI 1.06 NOVNWDXRBIJEJE-GUJIERIFSA-N R7E SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@H](NC(=O)c2oc(cc2)c3cccc(CN)c3)[C@@H](O)[C@H](O)[C@@H]1O" R7E SMILES CACTVS 3.385 "C[CH]1O[CH](NC(=O)c2oc(cc2)c3cccc(CN)c3)[CH](O)[CH](O)[CH]1O" R7E SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)NC(=O)c2ccc(o2)c3cccc(c3)CN)O)O)O" R7E SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1C(C(C(C(O1)NC(=O)c2ccc(o2)c3cccc(c3)CN)O)O)O" # _pdbx_chem_comp_identifier.comp_id R7E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "5-[3-(aminomethyl)phenyl]-~{N}-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]furan-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R7E "Create component" 2022-11-23 PDBE R7E "Initial release" 2023-02-08 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id R7E _pdbx_chem_comp_synonyms.name "(5-(3'-aminomethyl)phenyl)furan-2-carboxamido-b-L-fucopyranose" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #