data_R7M
#
_chem_comp.id R7M
_chem_comp.name "(2R)-2-hydroxy-7-methoxy-2-(pentafluoroethyl)-2,3-dihydro-4H-1-benzopyran-4-one"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H9 F5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-02-06
_chem_comp.pdbx_modified_date 2021-01-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 312.189
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code R7M
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VQR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R7M C10 C1 C 0 1 N N R 161.565 144.805 170.425 1.054 -0.640 -0.149 C10 R7M 1
R7M C13 C2 C 0 1 N N N 160.198 143.798 172.390 -0.723 -2.318 0.113 C13 R7M 2
R7M C15 C3 C 0 1 Y N N 159.083 144.411 170.440 -1.191 0.115 0.187 C15 R7M 3
R7M C17 C4 C 0 1 Y N N 157.742 144.344 169.965 -2.088 1.171 0.163 C17 R7M 4
R7M C20 C5 C 0 1 Y N N 156.733 143.455 171.579 -3.924 -0.387 -0.019 C20 R7M 5
R7M C21 C6 C 0 1 N N N 154.625 144.813 170.443 -5.712 1.631 -0.070 C21 R7M 6
R7M C11 C7 C 0 1 N N N 161.485 144.342 172.012 0.705 -1.985 0.506 C11 R7M 7
R7M C12 C8 C 0 1 N N N 162.208 145.993 170.388 2.477 -0.236 0.241 C12 R7M 8
R7M C14 C9 C 0 1 Y N N 159.260 143.915 171.674 -1.680 -1.201 0.101 C14 R7M 9
R7M C16 C10 C 0 1 N N N 162.864 146.149 169.025 2.698 1.240 -0.094 C16 R7M 10
R7M C18 C11 C 0 1 Y N N 157.891 143.417 172.203 -3.053 -1.439 0.000 C18 R7M 11
R7M C19 C12 C 0 1 Y N N 156.800 143.906 170.559 -3.449 0.920 0.060 C19 R7M 12
R7M F01 F1 F 0 1 N N N 161.336 147.010 170.615 2.658 -0.435 1.614 F01 R7M 13
R7M F02 F2 F 0 1 N N N 163.184 146.011 171.334 3.395 -1.018 -0.468 F02 R7M 14
R7M F03 F3 F 0 1 N N N 162.140 145.440 168.115 4.033 1.579 0.150 F03 R7M 15
R7M F04 F4 F 0 1 N N N 162.902 147.467 168.673 2.399 1.462 -1.442 F04 R7M 16
R7M F05 F5 F 0 1 N N N 164.132 145.651 169.085 1.863 2.030 0.705 F05 R7M 17
R7M O06 O1 O 0 1 N N N 160.170 144.939 169.713 0.135 0.357 0.299 O06 R7M 18
R7M O07 O2 O 0 1 N N N 162.329 143.872 169.723 0.966 -0.766 -1.570 O07 R7M 19
R7M O08 O3 O 0 1 N N N 160.081 143.233 173.417 -1.058 -3.448 -0.176 O08 R7M 20
R7M O09 O4 O 0 1 N N N 155.583 143.963 169.862 -4.324 1.956 0.038 O09 R7M 21
R7M H1 H1 H 0 1 N N N 157.557 144.726 168.972 -1.729 2.187 0.225 H1 R7M 22
R7M H2 H2 H 0 1 N N N 155.813 143.088 172.009 -4.986 -0.569 -0.097 H2 R7M 23
R7M H3 H3 H 0 1 N N N 153.707 144.799 169.838 -5.886 1.081 -0.995 H3 R7M 24
R7M H4 H4 H 0 1 N N N 154.397 144.467 171.462 -6.008 1.017 0.780 H4 R7M 25
R7M H5 H5 H 0 1 N N N 155.022 145.838 170.484 -6.300 2.549 -0.077 H5 R7M 26
R7M H6 H6 H 0 1 N N N 162.253 143.575 172.190 1.380 -2.760 0.145 H6 R7M 27
R7M H7 H7 H 0 1 N N N 161.691 145.220 172.642 0.782 -1.900 1.590 H7 R7M 28
R7M H8 H8 H 0 1 N N N 157.887 142.991 173.195 -3.425 -2.451 -0.061 H8 R7M 29
R7M H9 H9 H 0 1 N N N 163.177 143.778 170.140 1.071 0.070 -2.046 H9 R7M 30
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R7M F03 C16 SING N N 1
R7M F04 C16 SING N N 2
R7M C16 F05 SING N N 3
R7M C16 C12 SING N N 4
R7M O06 C10 SING N N 5
R7M O06 C15 SING N N 6
R7M O07 C10 SING N N 7
R7M O09 C21 SING N N 8
R7M O09 C19 SING N N 9
R7M C17 C15 DOUB Y N 10
R7M C17 C19 SING Y N 11
R7M C12 C10 SING N N 12
R7M C12 F01 SING N N 13
R7M C12 F02 SING N N 14
R7M C10 C11 SING N N 15
R7M C15 C14 SING Y N 16
R7M C19 C20 DOUB Y N 17
R7M C20 C18 SING Y N 18
R7M C14 C18 DOUB Y N 19
R7M C14 C13 SING N N 20
R7M C11 C13 SING N N 21
R7M C13 O08 DOUB N N 22
R7M C17 H1 SING N N 23
R7M C20 H2 SING N N 24
R7M C21 H3 SING N N 25
R7M C21 H4 SING N N 26
R7M C21 H5 SING N N 27
R7M C11 H6 SING N N 28
R7M C11 H7 SING N N 29
R7M C18 H8 SING N N 30
R7M O07 H9 SING N N 31
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R7M SMILES ACDLabs 12.01 "C2(CC(=O)c1c(cc(cc1)OC)O2)(C(F)(F)C(F)(F)F)O"
R7M InChI InChI 1.03 "InChI=1S/C12H9F5O4/c1-20-6-2-3-7-8(18)5-10(19,21-9(7)4-6)11(13,14)12(15,16)17/h2-4,19H,5H2,1H3/t10-/m1/s1"
R7M InChIKey InChI 1.03 NQJASZMLBMBHRG-SNVBAGLBSA-N
R7M SMILES_CANONICAL CACTVS 3.385 "COc1ccc2C(=O)C[C@@](O)(Oc2c1)C(F)(F)C(F)(F)F"
R7M SMILES CACTVS 3.385 "COc1ccc2C(=O)C[C](O)(Oc2c1)C(F)(F)C(F)(F)F"
R7M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)O[C@](CC2=O)(C(C(F)(F)F)(F)F)O"
R7M SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)OC(CC2=O)(C(C(F)(F)F)(F)F)O"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R7M "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2-hydroxy-7-methoxy-2-(pentafluoroethyl)-2,3-dihydro-4H-1-benzopyran-4-one"
R7M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-7-methoxy-2-oxidanyl-2-[1,1,2,2,2-pentakis(fluoranyl)ethyl]-3~{H}-chromen-4-one"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R7M "Create component" 2020-02-06 RCSB
R7M "Initial release" 2021-02-03 RCSB
##