data_R81
#
_chem_comp.id R81
_chem_comp.name "N,N'-(2,2'-dimethyl[1,1'-biphenyl]-3,3'-diyl)bis(5-{[(2-hydroxyethyl)amino]methyl}pyridine-2-carboxamide)"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C32 H36 N6 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-02-07
_chem_comp.pdbx_modified_date 2021-01-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 568.666
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code R81
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VQN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R81 C14 C1 C 0 1 N N N 33.783 -44.272 -8.981 9.710 4.523 0.637 C14 R81 1
R81 C7 C2 C 0 1 N N N 30.688 -47.157 -2.652 5.005 -1.638 -0.223 C7 R81 2
R81 N4 N1 N 0 1 Y N N 23.749 -40.904 3.642 -5.937 0.174 -0.716 N4 R81 3
R81 C2 C3 C 0 1 Y N N 28.117 -47.853 0.742 2.334 -4.227 -2.131 C2 R81 4
R81 C5 C4 C 0 1 Y N N 27.815 -45.790 -1.113 1.507 -2.495 -0.123 C5 R81 5
R81 C6 C5 C 0 1 N N N 27.695 -44.684 -2.169 1.062 -1.563 0.974 C6 R81 6
R81 N3 N2 N 0 1 N N N 23.803 -42.686 1.705 -3.907 -1.671 -0.087 N3 R81 7
R81 N1 N3 N 0 1 Y N N 31.338 -45.368 -3.996 5.466 0.585 0.642 N1 R81 8
R81 C19 C6 C 0 1 Y N N 24.041 -43.709 0.748 -2.965 -2.670 0.174 C19 R81 9
R81 C15 C7 C 0 1 N N N 33.082 -44.816 -10.229 9.988 5.404 -0.583 C15 R81 10
R81 C13 C8 C 0 1 N N N 33.911 -44.705 -6.609 8.543 2.543 1.396 C13 R81 11
R81 C11 C9 C 0 1 Y N N 33.097 -45.447 -5.575 7.641 1.417 0.960 C11 R81 12
R81 C16 C10 C 0 1 Y N N 25.581 -45.288 -0.170 -0.746 -3.562 -0.076 C16 R81 13
R81 C18 C11 C 0 1 N N N 26.320 -43.932 1.771 -1.299 -1.373 -1.180 C18 R81 14
R81 O O1 O 0 1 N N N 30.752 -48.344 -2.442 5.436 -2.697 -0.638 O R81 15
R81 C8 C12 C 0 1 Y N N 31.574 -46.622 -3.661 5.942 -0.569 0.190 C8 R81 16
R81 C9 C13 C 0 1 Y N N 32.562 -47.387 -4.274 7.316 -0.782 0.103 C9 R81 17
R81 C10 C14 C 0 1 Y N N 33.342 -46.781 -5.247 8.181 0.228 0.495 C10 R81 18
R81 N2 N4 N 0 1 N N N 33.568 -45.249 -7.908 8.832 3.412 0.248 N2 R81 19
R81 O1 O2 O 0 1 N N N 31.849 -44.101 -10.432 8.771 6.017 -1.015 O1 R81 20
R81 C12 C15 C 0 1 Y N N 32.085 -44.767 -4.928 6.264 1.560 1.020 C12 R81 21
R81 N N5 N 0 1 N N N 29.894 -46.276 -2.093 3.675 -1.438 -0.141 N R81 22
R81 C4 C16 C 0 1 Y N N 28.930 -46.587 -1.117 2.790 -2.400 -0.639 C4 R81 23
R81 C3 C17 C 0 1 Y N N 29.090 -47.601 -0.191 3.203 -3.271 -1.640 C3 R81 24
R81 C1 C18 C 0 1 Y N N 26.975 -47.058 0.760 1.051 -4.321 -1.630 C1 R81 25
R81 C C19 C 0 1 Y N N 26.836 -46.044 -0.186 0.630 -3.455 -0.623 C R81 26
R81 C17 C20 C 0 1 Y N N 25.283 -44.323 0.754 -1.681 -2.564 -0.339 C17 R81 27
R81 C31 C21 C 0 1 Y N N 24.624 -45.693 -1.096 -1.105 -4.661 0.702 C31 R81 28
R81 C30 C22 C 0 1 Y N N 23.373 -45.060 -1.126 -2.382 -4.754 1.218 C30 R81 29
R81 C29 C23 C 0 1 Y N N 23.076 -44.082 -0.208 -3.313 -3.767 0.953 C29 R81 30
R81 C20 C24 C 0 1 N N N 22.609 -42.438 2.233 -4.937 -1.477 0.761 C20 R81 31
R81 O2 O3 O 0 1 N N N 21.572 -43.035 1.995 -4.991 -2.100 1.803 O2 R81 32
R81 C21 C25 C 0 1 Y N N 22.565 -41.394 3.242 -6.001 -0.504 0.423 C21 R81 33
R81 C22 C26 C 0 1 Y N N 21.365 -40.992 3.814 -7.062 -0.308 1.304 C22 R81 34
R81 C23 C27 C 0 1 Y N N 21.409 -39.996 4.781 -8.051 0.606 0.975 C23 R81 35
R81 C24 C28 C 0 1 Y N N 22.652 -39.488 5.165 -7.944 1.292 -0.225 C24 R81 36
R81 C25 C29 C 0 1 Y N N 23.824 -39.963 4.591 -6.861 1.046 -1.054 C25 R81 37
R81 C26 C30 C 0 1 N N N 22.768 -38.432 6.216 -8.995 2.295 -0.624 C26 R81 38
R81 N5 N6 N 0 1 N N N 22.857 -39.091 7.516 -8.622 3.623 -0.118 N5 R81 39
R81 C27 C31 C 0 1 N N N 23.604 -38.347 8.560 -9.626 4.629 -0.489 C27 R81 40
R81 C28 C32 C 0 1 N N N 23.413 -39.073 9.902 -9.204 5.996 0.055 C28 R81 41
R81 O3 O4 O 0 1 N N N 24.466 -40.031 10.121 -7.997 6.411 -0.587 O3 R81 42
R81 H1 H1 H 0 1 N N N 34.859 -44.153 -9.174 10.650 4.126 1.020 H1 R81 43
R81 H2 H2 H 0 1 N N N 33.352 -43.300 -8.699 9.224 5.117 1.411 H2 R81 44
R81 H3 H3 H 0 1 N N N 28.235 -48.657 1.453 2.658 -4.899 -2.912 H3 R81 45
R81 H4 H4 H 0 1 N N N 27.205 -45.086 -3.068 1.368 -1.967 1.940 H4 R81 46
R81 H5 H5 H 0 1 N N N 27.096 -43.855 -1.765 1.520 -0.585 0.828 H5 R81 47
R81 H6 H6 H 0 1 N N N 28.698 -44.317 -2.432 -0.023 -1.464 0.949 H6 R81 48
R81 H7 H7 H 0 1 N N N 24.576 -42.122 1.997 -3.820 -1.117 -0.879 H7 R81 49
R81 H8 H8 H 0 1 N N N 32.868 -45.886 -10.093 10.709 6.177 -0.317 H8 R81 50
R81 H9 H9 H 0 1 N N N 33.734 -44.681 -11.105 10.392 4.792 -1.389 H9 R81 51
R81 H10 H10 H 0 1 N N N 34.984 -44.847 -6.414 8.049 3.123 2.176 H10 R81 52
R81 H11 H11 H 0 1 N N N 33.671 -43.632 -6.576 9.475 2.132 1.785 H11 R81 53
R81 H12 H12 H 0 1 N N N 26.933 -43.110 1.373 -0.830 -0.618 -0.549 H12 R81 54
R81 H13 H13 H 0 1 N N N 25.822 -43.604 2.695 -0.599 -1.685 -1.955 H13 R81 55
R81 H14 H14 H 0 1 N N N 26.964 -44.797 1.989 -2.192 -0.955 -1.644 H14 R81 56
R81 H15 H15 H 0 1 N N N 32.716 -48.420 -4.000 7.702 -1.721 -0.264 H15 R81 57
R81 H16 H16 H 0 1 N N N 34.127 -47.333 -5.743 9.251 0.092 0.439 H16 R81 58
R81 H17 H17 H 0 1 N N N 32.605 -45.517 -7.903 7.979 3.754 -0.170 H17 R81 59
R81 H19 H19 H 0 1 N N N 31.412 -44.436 -11.206 8.873 6.592 -1.786 H19 R81 60
R81 H20 H20 H 0 1 N N N 31.894 -43.734 -5.178 5.840 2.485 1.382 H20 R81 61
R81 H21 H21 H 0 1 N N N 29.979 -45.322 -2.379 3.331 -0.627 0.264 H21 R81 62
R81 H22 H22 H 0 1 N N N 29.989 -48.200 -0.202 4.206 -3.202 -2.035 H22 R81 63
R81 H23 H23 H 0 1 N N N 26.205 -47.225 1.499 0.373 -5.066 -2.019 H23 R81 64
R81 H24 H24 H 0 1 N N N 24.844 -46.492 -1.789 -0.382 -5.436 0.908 H24 R81 65
R81 H25 H25 H 0 1 N N N 22.643 -45.341 -1.871 -2.659 -5.607 1.821 H25 R81 66
R81 H26 H26 H 0 1 N N N 22.109 -43.602 -0.219 -4.313 -3.849 1.353 H26 R81 67
R81 H27 H27 H 0 1 N N N 20.428 -41.439 3.517 -7.114 -0.860 2.231 H27 R81 68
R81 H28 H28 H 0 1 N N N 20.500 -39.622 5.227 -8.886 0.780 1.638 H28 R81 69
R81 H29 H29 H 0 1 N N N 24.783 -39.578 4.906 -6.774 1.579 -1.989 H29 R81 70
R81 H30 H30 H 0 1 N N N 23.672 -37.830 6.041 -9.071 2.329 -1.711 H30 R81 71
R81 H31 H31 H 0 1 N N N 21.882 -37.780 6.189 -9.956 2.002 -0.202 H31 R81 72
R81 H32 H32 H 0 1 N N N 21.926 -39.240 7.850 -8.483 3.603 0.881 H32 R81 73
R81 H34 H34 H 0 1 N N N 24.673 -38.317 8.302 -9.707 4.679 -1.575 H34 R81 74
R81 H35 H35 H 0 1 N N N 23.216 -37.320 8.634 -10.592 4.352 -0.066 H35 R81 75
R81 H36 H36 H 0 1 N N N 23.423 -38.334 10.716 -9.991 6.724 -0.143 H36 R81 76
R81 H37 H37 H 0 1 N N N 22.446 -39.596 9.894 -9.038 5.923 1.130 H37 R81 77
R81 H38 H38 H 0 1 N N N 24.329 -40.467 10.954 -7.670 7.272 -0.290 H38 R81 78
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R81 O1 C15 SING N N 1
R81 C15 C14 SING N N 2
R81 C14 N2 SING N N 3
R81 N2 C13 SING N N 4
R81 C13 C11 SING N N 5
R81 C11 C10 DOUB Y N 6
R81 C11 C12 SING Y N 7
R81 C10 C9 SING Y N 8
R81 C12 N1 DOUB Y N 9
R81 C9 C8 DOUB Y N 10
R81 N1 C8 SING Y N 11
R81 C8 C7 SING N N 12
R81 C7 O DOUB N N 13
R81 C7 N SING N N 14
R81 C6 C5 SING N N 15
R81 N C4 SING N N 16
R81 C30 C31 DOUB Y N 17
R81 C30 C29 SING Y N 18
R81 C4 C5 DOUB Y N 19
R81 C4 C3 SING Y N 20
R81 C5 C SING Y N 21
R81 C31 C16 SING Y N 22
R81 C29 C19 DOUB Y N 23
R81 C3 C2 DOUB Y N 24
R81 C C16 SING N N 25
R81 C C1 DOUB Y N 26
R81 C16 C17 DOUB Y N 27
R81 C2 C1 SING Y N 28
R81 C19 C17 SING Y N 29
R81 C19 N3 SING N N 30
R81 C17 C18 SING N N 31
R81 N3 C20 SING N N 32
R81 O2 C20 DOUB N N 33
R81 C20 C21 SING N N 34
R81 C21 N4 DOUB Y N 35
R81 C21 C22 SING Y N 36
R81 N4 C25 SING Y N 37
R81 C22 C23 DOUB Y N 38
R81 C25 C24 DOUB Y N 39
R81 C23 C24 SING Y N 40
R81 C24 C26 SING N N 41
R81 C26 N5 SING N N 42
R81 N5 C27 SING N N 43
R81 C27 C28 SING N N 44
R81 C28 O3 SING N N 45
R81 C14 H1 SING N N 46
R81 C14 H2 SING N N 47
R81 C2 H3 SING N N 48
R81 C6 H4 SING N N 49
R81 C6 H5 SING N N 50
R81 C6 H6 SING N N 51
R81 N3 H7 SING N N 52
R81 C15 H8 SING N N 53
R81 C15 H9 SING N N 54
R81 C13 H10 SING N N 55
R81 C13 H11 SING N N 56
R81 C18 H12 SING N N 57
R81 C18 H13 SING N N 58
R81 C18 H14 SING N N 59
R81 C9 H15 SING N N 60
R81 C10 H16 SING N N 61
R81 N2 H17 SING N N 62
R81 O1 H19 SING N N 63
R81 C12 H20 SING N N 64
R81 N H21 SING N N 65
R81 C3 H22 SING N N 66
R81 C1 H23 SING N N 67
R81 C31 H24 SING N N 68
R81 C30 H25 SING N N 69
R81 C29 H26 SING N N 70
R81 C22 H27 SING N N 71
R81 C23 H28 SING N N 72
R81 C25 H29 SING N N 73
R81 C26 H30 SING N N 74
R81 C26 H31 SING N N 75
R81 N5 H32 SING N N 76
R81 C27 H34 SING N N 77
R81 C27 H35 SING N N 78
R81 C28 H36 SING N N 79
R81 C28 H37 SING N N 80
R81 O3 H38 SING N N 81
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R81 SMILES ACDLabs 12.01 "C(NCc4ccc(C(=O)Nc3c(c(c2c(c(NC(c1ncc(cc1)CNCCO)=O)ccc2)C)ccc3)C)nc4)CO"
R81 InChI InChI 1.03 "InChI=1S/C32H36N6O4/c1-21-25(5-3-7-27(21)37-31(41)29-11-9-23(19-35-29)17-33-13-15-39)26-6-4-8-28(22(26)2)38-32(42)30-12-10-24(20-36-30)18-34-14-16-40/h3-12,19-20,33-34,39-40H,13-18H2,1-2H3,(H,37,41)(H,38,42)"
R81 InChIKey InChI 1.03 FZEPAZRIEAMJFE-UHFFFAOYSA-N
R81 SMILES_CANONICAL CACTVS 3.385 "Cc1c(NC(=O)c2ccc(CNCCO)cn2)cccc1c3cccc(NC(=O)c4ccc(CNCCO)cn4)c3C"
R81 SMILES CACTVS 3.385 "Cc1c(NC(=O)c2ccc(CNCCO)cn2)cccc1c3cccc(NC(=O)c4ccc(CNCCO)cn4)c3C"
R81 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1NC(=O)c2ccc(cn2)CNCCO)c3cccc(c3C)NC(=O)c4ccc(cn4)CNCCO"
R81 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(cccc1NC(=O)c2ccc(cn2)CNCCO)c3cccc(c3C)NC(=O)c4ccc(cn4)CNCCO"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R81 "SYSTEMATIC NAME" ACDLabs 12.01 "N,N'-(2,2'-dimethyl[1,1'-biphenyl]-3,3'-diyl)bis(5-{[(2-hydroxyethyl)amino]methyl}pyridine-2-carboxamide)"
R81 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[(2-hydroxyethylamino)methyl]-~{N}-[3-[3-[[5-[(2-hydroxyethylamino)methyl]pyridin-2-yl]carbonylamino]-2-methyl-phenyl]-2-methyl-phenyl]pyridine-2-carboxamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R81 "Create component" 2020-02-07 RCSB
R81 "Initial release" 2021-01-20 RCSB
##