data_R89 # _chem_comp.id R89 _chem_comp.name "11-[(3-chlorophenyl)methyl]-7-[[4-(trifluoromethyl)phenyl]methyl]-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),3,5-trien-8-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H20 Cl F3 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-09-05 _chem_comp.pdbx_modified_date 2024-08-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.890 _chem_comp.one_letter_code ? _chem_comp.three_letter_code R89 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8W7C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal R89 C10 C1 C 0 1 N N N N N N 8.259 -21.764 30.558 -5.109 -2.530 0.895 C10 R89 1 R89 C13 C2 C 0 1 Y N N N N N -0.424 -15.128 31.296 4.402 -2.760 -0.259 C13 R89 2 R89 C15 C3 C 0 1 Y N N N N N 0.159 -13.681 29.200 4.606 -2.591 2.122 C15 R89 3 R89 C17 C4 C 0 1 Y N N N N N 1.623 -13.495 31.375 4.644 -0.612 0.773 C17 R89 4 R89 C20 C5 C 0 1 N N N N N N 2.778 -12.915 32.166 4.750 0.887 0.658 C20 R89 5 R89 C22 C6 C 0 1 N N N N N N 4.307 -13.775 30.645 2.605 1.095 -0.440 C22 R89 6 R89 C24 C7 C 0 1 N N N N N N 6.127 -13.840 32.349 1.044 2.882 0.331 C24 R89 7 R89 C26 C8 C 0 1 N N N N N N 4.534 -12.054 32.210 3.482 2.945 0.827 C26 R89 8 R89 C28 C9 C 0 1 N N N N N N 6.570 -14.830 30.062 0.230 1.280 -1.240 C28 R89 9 R89 C02 C10 C 0 1 N N N N N N 8.820 -15.831 29.603 -2.047 1.347 -2.104 C02 R89 10 R89 C03 C11 C 0 1 Y N N N N N 8.717 -17.324 29.840 -2.846 0.336 -1.322 C03 R89 11 R89 C04 C12 C 0 1 Y N N N N N 7.354 -17.901 30.175 -3.942 0.742 -0.584 C04 R89 12 R89 C05 C13 C 0 1 Y N N N N N 7.211 -19.393 30.414 -4.674 -0.186 0.133 C05 R89 13 R89 C06 C14 C 0 1 Y N N N N N 8.432 -20.286 30.313 -4.310 -1.519 0.113 C06 R89 14 R89 C07 C15 C 0 1 Y N N N N N 9.798 -19.712 29.975 -3.214 -1.925 -0.625 C07 R89 15 R89 C08 C16 C 0 1 Y N N N N N 9.942 -18.218 29.739 -2.485 -0.999 -1.347 C08 R89 16 R89 C14 C17 C 0 1 Y N N N N N -0.727 -14.718 29.869 4.455 -3.363 0.986 C14 R89 17 R89 C16 C18 C 0 1 Y N N N N N 1.330 -13.066 29.951 4.703 -1.216 2.015 C16 R89 18 R89 C18 C19 C 0 1 Y N N N N N 0.738 -14.520 32.050 4.499 -1.384 -0.364 C18 R89 19 R89 C23 C20 C 0 1 N N N N N N 5.664 -14.144 31.007 1.273 1.797 -0.423 C23 R89 20 R89 C25 C21 C 0 1 N N N N N N 5.235 -13.195 33.152 2.103 3.470 1.229 C25 R89 21 R89 C30 C22 C 0 1 Y N N N N N 8.356 -14.837 31.873 -1.196 2.999 -0.483 C30 R89 22 R89 C32 C23 C 0 1 Y N N N N N 9.442 -14.558 33.736 -1.968 4.739 0.554 C32 R89 23 R89 C33 C24 C 0 1 Y N N N N N 8.162 -14.020 33.897 -0.693 4.590 0.957 C33 R89 24 R89 F09 F1 F 0 1 N N N N N N 7.440 -21.953 31.621 -5.663 -1.915 2.022 F09 R89 25 R89 F11 F2 F 0 1 N N N N N N 9.475 -22.307 30.785 -6.133 -3.039 0.089 F11 R89 26 R89 F12 F3 F 0 1 N N N N N N 7.702 -22.330 29.466 -4.270 -3.575 1.298 F12 R89 27 R89 N01 N1 N 0 1 N N N N N N 7.892 -15.169 30.486 -0.975 1.880 -1.260 N01 R89 28 R89 N21 N2 N 0 1 N N N N N N 3.724 -12.560 31.441 3.407 1.478 0.725 N21 R89 29 R89 N27 N3 N 0 1 Y N N N N N 7.509 -14.192 32.766 -0.194 3.488 0.302 N27 R89 30 R89 N31 N4 N 0 1 Y N N N N N 9.536 -15.054 32.484 -2.254 3.761 -0.322 N31 R89 31 R89 O29 O1 O 0 1 N N N N N N 6.208 -15.095 28.976 0.428 0.292 -1.924 O29 R89 32 R89 CL19 CL1 CL 0 0 N N N N N N -1.432 -16.328 32.109 4.220 -3.730 -1.687 CL19 R89 33 R89 H1 H1 H 0 1 N N N N N N -0.044 -13.378 28.183 4.648 -3.062 3.093 H1 R89 34 R89 H2 H2 H 0 1 N N N N N N 2.417 -12.041 32.727 5.358 1.272 1.476 H2 R89 35 R89 H3 H3 H 0 1 N N N N N N 3.141 -13.678 32.870 5.214 1.146 -0.294 H3 R89 36 R89 H4 H4 H 0 1 N N N N N N 4.295 -13.521 29.575 2.443 0.017 -0.426 H4 R89 37 R89 H5 H5 H 0 1 N N N N N N 3.657 -14.644 30.822 3.141 1.365 -1.350 H5 R89 38 R89 H6 H6 H 0 1 N N N N N N 5.312 -11.540 31.627 3.768 3.366 -0.137 H6 R89 39 R89 H7 H7 H 0 1 N N N N N N 4.016 -11.326 32.851 4.216 3.225 1.582 H7 R89 40 R89 H8 H8 H 0 1 N N N N N N 9.844 -15.490 29.816 -1.615 0.867 -2.982 H8 R89 41 R89 H9 H9 H 0 1 N N N N N N 8.567 -15.602 28.557 -2.701 2.161 -2.419 H9 R89 42 R89 H10 H10 H 0 1 N N N N N N 6.492 -17.254 30.243 -4.226 1.783 -0.568 H10 R89 43 R89 H11 H11 H 0 1 N N N N N N 6.247 -19.815 30.654 -5.530 0.132 0.710 H11 R89 44 R89 H12 H12 H 0 1 N N N N N N 10.659 -20.360 29.903 -2.930 -2.967 -0.641 H12 R89 45 R89 H13 H13 H 0 1 N N N N N N 10.907 -17.795 29.501 -1.631 -1.316 -1.926 H13 R89 46 R89 H14 H14 H 0 1 N N N N N N -1.559 -15.156 29.337 4.379 -4.437 1.069 H14 R89 47 R89 H15 H15 H 0 1 N N N N N N 1.952 -12.325 29.471 4.821 -0.613 2.903 H15 R89 48 R89 H16 H16 H 0 1 N N N N N N 0.936 -14.817 33.069 4.462 -0.913 -1.336 H16 R89 49 R89 H17 H17 H 0 1 N N N N N N 5.753 -12.726 34.001 2.090 4.556 1.140 H17 R89 50 R89 H18 H18 H 0 1 N N N N N N 4.478 -13.899 33.528 1.897 3.191 2.262 H18 R89 51 R89 H19 H19 H 0 1 N N N N N N 10.221 -14.574 34.484 -2.647 5.513 0.880 H19 R89 52 R89 H20 H20 H 0 1 N N N N N N 7.777 -13.548 34.789 -0.163 5.216 1.659 H20 R89 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal R89 O29 C28 DOUB N N 1 R89 C15 C14 DOUB Y N 2 R89 C15 C16 SING Y N 3 R89 F12 C10 SING N N 4 R89 C02 C03 SING N N 5 R89 C02 N01 SING N N 6 R89 C08 C03 DOUB Y N 7 R89 C08 C07 SING Y N 8 R89 C03 C04 SING Y N 9 R89 C14 C13 SING Y N 10 R89 C16 C17 DOUB Y N 11 R89 C07 C06 DOUB Y N 12 R89 C28 N01 SING N N 13 R89 C28 C23 SING N N 14 R89 C04 C05 DOUB Y N 15 R89 C06 C05 SING Y N 16 R89 C06 C10 SING N N 17 R89 N01 C30 SING N N 18 R89 C10 F11 SING N N 19 R89 C10 F09 SING N N 20 R89 C22 C23 SING N N 21 R89 C22 N21 SING N N 22 R89 C23 C24 DOUB N N 23 R89 C13 C18 DOUB Y N 24 R89 C13 CL19 SING N N 25 R89 C17 C18 SING Y N 26 R89 C17 C20 SING N N 27 R89 N21 C20 SING N N 28 R89 N21 C26 SING N N 29 R89 C30 N31 DOUB Y N 30 R89 C30 N27 SING Y N 31 R89 C26 C25 SING N N 32 R89 C24 N27 SING N N 33 R89 C24 C25 SING N N 34 R89 N31 C32 SING Y N 35 R89 N27 C33 SING Y N 36 R89 C32 C33 DOUB Y N 37 R89 C15 H1 SING N N 38 R89 C20 H2 SING N N 39 R89 C20 H3 SING N N 40 R89 C22 H4 SING N N 41 R89 C22 H5 SING N N 42 R89 C26 H6 SING N N 43 R89 C26 H7 SING N N 44 R89 C02 H8 SING N N 45 R89 C02 H9 SING N N 46 R89 C04 H10 SING N N 47 R89 C05 H11 SING N N 48 R89 C07 H12 SING N N 49 R89 C08 H13 SING N N 50 R89 C14 H14 SING N N 51 R89 C16 H15 SING N N 52 R89 C18 H16 SING N N 53 R89 C25 H17 SING N N 54 R89 C25 H18 SING N N 55 R89 C32 H19 SING N N 56 R89 C33 H20 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor R89 InChI InChI 1.06 "InChI=1S/C24H20ClF3N4O/c25-19-3-1-2-17(12-19)13-30-10-8-21-20(15-30)22(33)32(23-29-9-11-31(21)23)14-16-4-6-18(7-5-16)24(26,27)28/h1-7,9,11-12H,8,10,13-15H2" R89 InChIKey InChI 1.06 YLOGPPCKNRATOS-UHFFFAOYSA-N R89 SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)c1ccc(CN2C(=O)C3=C(CCN(Cc4cccc(Cl)c4)C3)n5ccnc25)cc1" R89 SMILES CACTVS 3.385 "FC(F)(F)c1ccc(CN2C(=O)C3=C(CCN(Cc4cccc(Cl)c4)C3)n5ccnc25)cc1" R89 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)CN2CCC3=C(C2)C(=O)N(c4n3ccn4)Cc5ccc(cc5)C(F)(F)F" R89 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)CN2CCC3=C(C2)C(=O)N(c4n3ccn4)Cc5ccc(cc5)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id R89 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "11-[(3-chlorophenyl)methyl]-7-[[4-(trifluoromethyl)phenyl]methyl]-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),3,5-trien-8-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site R89 "Create component" 2023-09-05 PDBC R89 "Initial release" 2024-09-04 RCSB #