data_RAB # _chem_comp.id RAB _chem_comp.name "2-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 9-BETA-D-ARABINOFURANOSYL-ADENINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-07-09 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RAB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1PW7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RAB "O5'" "O5'" O 0 1 N N N 93.513 65.943 17.286 -4.487 2.021 -0.980 "O5'" RAB 1 RAB "C5'" "C5'" C 0 1 N N N 93.547 64.832 18.192 -4.245 1.029 0.019 "C5'" RAB 2 RAB "C4'" "C4'" C 0 1 N N R 93.782 65.323 19.607 -3.145 0.080 -0.459 "C4'" RAB 3 RAB "O4'" "O4'" O 0 1 N N N 93.703 66.742 19.805 -1.885 0.780 -0.558 "O4'" RAB 4 RAB "C1'" "C1'" C 0 1 N N R 92.486 67.112 20.459 -0.874 -0.250 -0.523 "C1'" RAB 5 RAB N9 N9 N 0 1 Y N N 91.103 67.437 19.630 0.418 0.317 -0.127 N9 RAB 6 RAB C4 C4 C 0 1 Y N N 90.078 66.712 19.027 1.654 -0.222 -0.382 C4 RAB 7 RAB N3 N3 N 0 1 Y N N 89.887 65.348 18.990 2.092 -1.314 -1.001 N3 RAB 8 RAB C2 C2 C 0 1 Y N N 88.779 64.997 18.308 3.381 -1.565 -1.085 C2 RAB 9 RAB N1 N1 N 0 1 Y N N 87.898 65.832 17.696 4.295 -0.763 -0.571 N1 RAB 10 RAB C6 C6 C 0 1 Y N N 88.106 67.194 17.744 3.952 0.352 0.066 C6 RAB 11 RAB N6 N6 N 0 1 N N N 87.246 68.017 17.144 4.917 1.187 0.602 N6 RAB 12 RAB C5 C5 C 0 1 Y N N 89.261 67.681 18.450 2.587 0.661 0.187 C5 RAB 13 RAB N7 N7 N 0 1 Y N N 89.760 68.970 18.691 1.886 1.679 0.742 N7 RAB 14 RAB C8 C8 C 0 1 Y N N 90.838 68.744 19.389 0.613 1.477 0.562 C8 RAB 15 RAB "C2'" "C2'" C 0 1 N N S 92.243 65.945 21.391 -1.368 -1.256 0.541 "C2'" RAB 16 RAB "O2'" "O2'" O 0 1 N N N 90.883 65.701 21.712 -0.783 -0.969 1.813 "O2'" RAB 17 RAB "C3'" "C3'" C 0 1 N N S 92.830 64.788 20.623 -2.898 -1.031 0.585 "C3'" RAB 18 RAB "O3'" "O3'" O 0 1 N N N 93.613 64.068 21.568 -3.590 -2.226 0.218 "O3'" RAB 19 RAB "H5'" "H5'" H 0 1 N N N 93.366 65.635 16.399 -5.185 2.597 -0.640 "H5'" RAB 20 RAB "H5'1" "1H5'" H 0 0 N N N 94.297 64.066 17.886 -5.160 0.464 0.199 "H5'1" RAB 21 RAB "H5'2" "2H5'" H 0 0 N N N 92.630 64.202 18.115 -3.930 1.513 0.944 "H5'2" RAB 22 RAB "H4'" "H4'" H 0 1 N N N 94.822 64.947 19.747 -3.413 -0.356 -1.421 "H4'" RAB 23 RAB "H1'" "H1'" H 0 1 N N N 92.670 68.128 20.880 -0.792 -0.736 -1.495 "H1'" RAB 24 RAB H2 H2 H 0 1 N N N 88.572 63.916 18.244 3.704 -2.462 -1.594 H2 RAB 25 RAB HN61 1HN6 H 0 0 N N N 86.310 67.820 17.497 5.856 0.961 0.515 HN61 RAB 26 RAB HN62 2HN6 H 0 0 N N N 87.400 69.025 17.180 4.654 2.000 1.061 HN62 RAB 27 RAB H8 H8 H 0 1 N N N 91.466 69.579 19.742 -0.174 2.132 0.907 H8 RAB 28 RAB "H2'" "H2'" H 0 1 N N N 92.698 66.132 22.392 -1.140 -2.278 0.239 "H2'" RAB 29 RAB H1 H1 H 0 1 N N N 90.730 64.968 22.297 -1.175 -1.585 2.446 H1 RAB 30 RAB "H3'" "H3'" H 0 1 N N N 92.038 64.174 20.135 -3.208 -0.700 1.576 "H3'" RAB 31 RAB H3 H3 H 0 1 N N N 93.007 63.727 22.215 -4.533 -2.009 0.204 H3 RAB 32 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RAB "O5'" "C5'" SING N N 1 RAB "O5'" "H5'" SING N N 2 RAB "C5'" "C4'" SING N N 3 RAB "C5'" "H5'1" SING N N 4 RAB "C5'" "H5'2" SING N N 5 RAB "C4'" "O4'" SING N N 6 RAB "C4'" "C3'" SING N N 7 RAB "C4'" "H4'" SING N N 8 RAB "O4'" "C1'" SING N N 9 RAB "C1'" N9 SING N N 10 RAB "C1'" "C2'" SING N N 11 RAB "C1'" "H1'" SING N N 12 RAB N9 C4 SING Y N 13 RAB N9 C8 SING Y N 14 RAB C4 N3 DOUB Y N 15 RAB C4 C5 SING Y N 16 RAB N3 C2 SING Y N 17 RAB C2 N1 DOUB Y N 18 RAB C2 H2 SING N N 19 RAB N1 C6 SING Y N 20 RAB C6 N6 SING N N 21 RAB C6 C5 DOUB Y N 22 RAB N6 HN61 SING N N 23 RAB N6 HN62 SING N N 24 RAB C5 N7 SING Y N 25 RAB N7 C8 DOUB Y N 26 RAB C8 H8 SING N N 27 RAB "C2'" "O2'" SING N N 28 RAB "C2'" "C3'" SING N N 29 RAB "C2'" "H2'" SING N N 30 RAB "O2'" H1 SING N N 31 RAB "C3'" "O3'" SING N N 32 RAB "C3'" "H3'" SING N N 33 RAB "O3'" H3 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RAB SMILES ACDLabs 10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CO)N" RAB SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@@H]3O" RAB SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O" RAB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@H]([C@@H]([C@H](O3)CO)O)O)N" RAB SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CO)O)O)N" RAB InChI InChI 1.03 "InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)/t4-,6-,7+,10-/m1/s1" RAB InChIKey InChI 1.03 OIRDTQYFTABQOQ-UHTZMRCNSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RAB "SYSTEMATIC NAME" ACDLabs 10.04 9-beta-D-arabinofuranosyl-9H-purin-6-amine RAB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4S,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RAB "Create component" 2003-07-09 RCSB RAB "Modify descriptor" 2011-06-04 RCSB RAB "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id RAB _pdbx_chem_comp_synonyms.name 9-BETA-D-ARABINOFURANOSYL-ADENINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##