data_RB8 # _chem_comp.id RB8 _chem_comp.name 6-deoxy-6-sulfo-D-fructose _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H12 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(2~{S},3~{S},4~{S},5~{R})-5-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxolan-2-yl]methanesulfonic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-23 _chem_comp.pdbx_modified_date 2021-04-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.220 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RB8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AG6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RB8 O1 O1 O 0 1 N N N 21.022 30.394 -29.096 2.351 -1.319 0.783 O1 RB8 1 RB8 S1 S1 S 0 1 N N N 22.409 30.379 -28.803 2.620 -0.130 0.052 S1 RB8 2 RB8 O2 O2 O 0 1 N N N 22.778 30.069 -27.431 3.865 0.443 0.713 O2 RB8 3 RB8 O3 O3 O 0 1 N N N 23.155 29.526 -29.778 2.948 -0.178 -1.330 O3 RB8 4 RB8 C1 C1 C 0 1 N N N 23.106 31.963 -29.182 1.333 1.110 0.358 C1 RB8 5 RB8 C2 C2 C 0 1 N N S 22.350 33.090 -28.545 0.016 0.643 -0.266 C2 RB8 6 RB8 O4 O4 O 0 1 N N N 22.426 32.988 -27.107 -0.478 -0.533 0.410 O4 RB8 7 RB8 C3 C3 C 0 1 N N R 22.680 34.271 -26.509 -1.889 -0.608 0.144 C3 RB8 8 RB8 O5 O5 O 0 1 N N N 24.008 34.396 -26.035 -2.569 -1.153 1.276 O5 RB8 9 RB8 C4 C4 C 0 1 N N N 21.628 34.538 -25.419 -2.140 -1.485 -1.085 C4 RB8 10 RB8 O6 O6 O 0 1 N N N 21.780 33.685 -24.274 -1.665 -2.809 -0.830 O6 RB8 11 RB8 C5 C5 C 0 1 N N S 22.519 35.298 -27.639 -2.382 0.827 -0.124 C5 RB8 12 RB8 O7 O7 O 0 1 N N N 23.233 36.502 -27.403 -3.327 1.225 0.872 O7 RB8 13 RB8 C6 C6 C 0 1 N N S 22.893 34.477 -28.870 -1.101 1.692 -0.032 C6 RB8 14 RB8 O8 O8 O 0 1 N N N 22.255 34.904 -30.062 -1.086 2.691 -1.053 O8 RB8 15 RB8 H1 H1 H 0 1 N N N 24.145 31.987 -28.821 1.200 1.239 1.432 H1 RB8 16 RB8 H2 H2 H 0 1 N N N 23.093 32.102 -30.273 1.630 2.060 -0.088 H2 RB8 17 RB8 H3 H3 H 0 1 N N N 21.299 33.041 -28.865 0.145 0.448 -1.331 H3 RB8 18 RB8 H4 H4 H 0 1 N N N 24.153 33.775 -25.331 -2.295 -2.052 1.505 H4 RB8 19 RB8 H5 H5 H 0 1 N N N 21.720 35.584 -25.092 -3.209 -1.517 -1.296 H5 RB8 20 RB8 H6 H6 H 0 1 N N N 20.629 34.374 -25.848 -1.612 -1.069 -1.943 H6 RB8 21 RB8 H7 H7 H 0 1 N N N 21.108 33.890 -23.634 -1.792 -3.421 -1.568 H7 RB8 22 RB8 H8 H8 H 0 1 N N N 21.447 35.533 -27.715 -2.823 0.900 -1.118 H8 RB8 23 RB8 H9 H9 H 0 1 N N N 22.906 36.915 -26.612 -3.671 2.121 0.752 H9 RB8 24 RB8 H10 H10 H 0 1 N N N 23.987 34.440 -28.983 -1.008 2.145 0.955 H10 RB8 25 RB8 H11 H11 H 0 1 N N N 22.569 35.769 -30.298 -1.767 3.369 -0.950 H11 RB8 26 RB8 H12 H12 H 0 1 N N N 23.429 29.377 -27.426 4.648 -0.118 0.631 H12 RB8 27 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RB8 O8 C6 SING N N 1 RB8 O3 S1 DOUB N N 2 RB8 C1 S1 SING N N 3 RB8 C1 C2 SING N N 4 RB8 O1 S1 DOUB N N 5 RB8 C6 C2 SING N N 6 RB8 C6 C5 SING N N 7 RB8 S1 O2 SING N N 8 RB8 C2 O4 SING N N 9 RB8 C5 O7 SING N N 10 RB8 C5 C3 SING N N 11 RB8 O4 C3 SING N N 12 RB8 C3 O5 SING N N 13 RB8 C3 C4 SING N N 14 RB8 C4 O6 SING N N 15 RB8 C1 H1 SING N N 16 RB8 C1 H2 SING N N 17 RB8 C2 H3 SING N N 18 RB8 O5 H4 SING N N 19 RB8 C4 H5 SING N N 20 RB8 C4 H6 SING N N 21 RB8 O6 H7 SING N N 22 RB8 C5 H8 SING N N 23 RB8 O7 H9 SING N N 24 RB8 C6 H10 SING N N 25 RB8 O8 H11 SING N N 26 RB8 O2 H12 SING N N 27 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RB8 InChI InChI 1.03 "InChI=1S/C6H12O8S/c7-2-6(10)5(9)4(8)3(14-6)1-15(11,12)13/h3-5,7-10H,1-2H2,(H,11,12,13)/t3-,4-,5+,6-/m1/s1" RB8 InChIKey InChI 1.03 QTQNAYQDKCBJTC-ARQDHWQXSA-N RB8 SMILES_CANONICAL CACTVS 3.385 "OC[C@@]1(O)O[C@H](C[S](O)(=O)=O)[C@@H](O)[C@@H]1O" RB8 SMILES CACTVS 3.385 "OC[C]1(O)O[CH](C[S](O)(=O)=O)[CH](O)[CH]1O" RB8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@](O1)(CO)O)O)O)S(=O)(=O)O" RB8 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(O1)(CO)O)O)O)S(=O)(=O)O" # _pdbx_chem_comp_identifier.comp_id RB8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},3~{S},4~{S},5~{R})-5-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxolan-2-yl]methanesulfonic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id RB8 _pdbx_chem_comp_synonyms.name "[(2~{S},3~{S},4~{S},5~{R})-5-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxolan-2-yl]methanesulfonic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RB8 "Create component" 2020-09-23 PDBE RB8 "Modify synonyms" 2021-03-13 RCSB RB8 "Initial release" 2021-04-14 RCSB ##