data_RD2 # _chem_comp.id RD2 _chem_comp.name "[(6-hydroxynaphthalen-2-yl)methylene]bis(phosphonic acid)" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 O7 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-10-13 _chem_comp.pdbx_modified_date 2017-10-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 318.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RD2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5TLH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RD2 O1 O1 O 0 1 N N N 6.304 -33.431 53.236 6.231 -0.017 0.539 O1 RD2 1 RD2 C2 C1 C 0 1 Y N N 6.827 -34.633 53.583 4.935 -0.003 0.131 C2 RD2 2 RD2 C3 C2 C 0 1 Y N N 6.286 -35.803 53.069 3.936 -0.037 1.062 C3 RD2 3 RD2 C4 C3 C 0 1 Y N N 6.830 -37.028 53.426 2.596 -0.022 0.642 C4 RD2 4 RD2 C5 C4 C 0 1 Y N N 7.912 -37.077 54.291 2.301 0.028 -0.743 C5 RD2 5 RD2 C6 C5 C 0 1 Y N N 8.447 -35.914 54.803 3.354 0.062 -1.673 C6 RD2 6 RD2 C7 C6 C 0 1 Y N N 7.909 -34.693 54.447 4.642 0.052 -1.234 C7 RD2 7 RD2 C9 C7 C 0 1 Y N N 6.293 -38.205 52.921 1.541 -0.056 1.571 C9 RD2 8 RD2 C10 C8 C 0 1 Y N N 6.839 -39.425 53.278 0.254 -0.041 1.128 C10 RD2 9 RD2 C11 C9 C 0 1 Y N N 7.922 -39.467 54.136 -0.036 0.008 -0.235 C11 RD2 10 RD2 C12 C10 C 0 1 Y N N 8.455 -38.297 54.645 0.959 0.042 -1.162 C12 RD2 11 RD2 C13 C11 C 0 1 N N N 8.508 -40.761 54.537 -1.473 0.023 -0.688 C13 RD2 12 RD2 P14 P1 P 0 1 N N N 9.137 -41.677 53.104 -2.310 -1.489 -0.105 P14 RD2 13 RD2 P15 P2 P 0 1 N N N 7.255 -41.773 55.377 -2.313 1.486 0.003 P15 RD2 14 RD2 O16 O2 O 0 1 N N N 9.939 -40.776 52.173 -3.775 -1.319 -0.225 O16 RD2 15 RD2 O17 O3 O 0 1 N N N 7.970 -42.282 52.335 -1.839 -2.741 -1.001 O17 RD2 16 RD2 O18 O4 O 0 1 N N N 10.038 -42.798 53.616 -1.924 -1.756 1.435 O18 RD2 17 RD2 O19 O5 O 0 1 N N N 6.408 -42.500 54.338 -2.262 1.433 1.481 O19 RD2 18 RD2 O20 O6 O 0 1 N N N 6.353 -40.911 56.251 -1.574 2.821 -0.512 O20 RD2 19 RD2 O21 O7 O 0 1 N N N 7.973 -42.805 56.238 -3.848 1.502 -0.481 O21 RD2 20 RD2 H1 H1 H 0 1 N N N 6.786 -32.738 53.672 6.605 0.862 0.692 H1 RD2 21 RD2 H3 H2 H 0 1 N N N 5.444 -35.760 52.393 4.175 -0.075 2.115 H3 RD2 22 RD2 H6 H3 H 0 1 N N N 9.286 -35.958 55.482 3.143 0.099 -2.732 H6 RD2 23 RD2 H7 H4 H 0 1 N N N 8.333 -33.782 54.843 5.449 0.083 -1.951 H7 RD2 24 RD2 H9 H5 H 0 1 N N N 5.448 -38.168 52.249 1.750 -0.095 2.629 H9 RD2 25 RD2 H10 H6 H 0 1 N N N 6.421 -40.341 52.888 -0.555 -0.068 1.843 H10 RD2 26 RD2 H121 H7 H 0 0 N N N 9.297 -38.337 55.320 0.720 0.080 -2.214 H121 RD2 27 RD2 H23 H8 H 0 1 N N N 9.346 -40.627 55.237 -1.511 0.062 -1.776 H23 RD2 28 RD2 H2 H9 H 0 1 N N N 7.987 -41.971 51.437 -0.888 -2.912 -0.970 H2 RD2 29 RD2 H4 H10 H 0 1 N N N 10.908 -42.699 53.248 -2.335 -2.546 1.812 H4 RD2 30 RD2 H5 H11 H 0 1 N N N 5.451 -41.006 55.967 -1.569 2.922 -1.473 H5 RD2 31 RD2 H8 H12 H 0 1 N N N 7.741 -43.679 55.945 -4.357 2.255 -0.151 H8 RD2 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RD2 O16 P14 DOUB N N 1 RD2 O17 P14 SING N N 2 RD2 C9 C10 DOUB Y N 3 RD2 C9 C4 SING Y N 4 RD2 C3 C4 DOUB Y N 5 RD2 C3 C2 SING Y N 6 RD2 P14 O18 SING N N 7 RD2 P14 C13 SING N N 8 RD2 O1 C2 SING N N 9 RD2 C10 C11 SING Y N 10 RD2 C4 C5 SING Y N 11 RD2 C2 C7 DOUB Y N 12 RD2 C11 C13 SING N N 13 RD2 C11 C12 DOUB Y N 14 RD2 C5 C12 SING Y N 15 RD2 C5 C6 DOUB Y N 16 RD2 O19 P15 DOUB N N 17 RD2 C7 C6 SING Y N 18 RD2 C13 P15 SING N N 19 RD2 P15 O21 SING N N 20 RD2 P15 O20 SING N N 21 RD2 O1 H1 SING N N 22 RD2 C3 H3 SING N N 23 RD2 C6 H6 SING N N 24 RD2 C7 H7 SING N N 25 RD2 C9 H9 SING N N 26 RD2 C10 H10 SING N N 27 RD2 C12 H121 SING N N 28 RD2 C13 H23 SING N N 29 RD2 O17 H2 SING N N 30 RD2 O18 H4 SING N N 31 RD2 O20 H5 SING N N 32 RD2 O21 H8 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RD2 SMILES ACDLabs 12.01 "Oc1ccc2c(c1)ccc(C(P(O)(O)=O)P(O)(=O)O)c2" RD2 InChI InChI 1.03 "InChI=1S/C11H12O7P2/c12-10-4-3-7-5-9(2-1-8(7)6-10)11(19(13,14)15)20(16,17)18/h1-6,11-12H,(H2,13,14,15)(H2,16,17,18)" RD2 InChIKey InChI 1.03 KBQHMDQNDJAVLF-UHFFFAOYSA-N RD2 SMILES_CANONICAL CACTVS 3.385 "Oc1ccc2cc(ccc2c1)C([P](O)(O)=O)[P](O)(O)=O" RD2 SMILES CACTVS 3.385 "Oc1ccc2cc(ccc2c1)C([P](O)(O)=O)[P](O)(O)=O" RD2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(cc2c1cc(cc2)O)C(P(=O)(O)O)P(=O)(O)O" RD2 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(cc2c1cc(cc2)O)C(P(=O)(O)O)P(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RD2 "SYSTEMATIC NAME" ACDLabs 12.01 "[(6-hydroxynaphthalen-2-yl)methylene]bis(phosphonic acid)" RD2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(6-oxidanylnaphthalen-2-yl)-phosphono-methyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RD2 "Create component" 2016-10-13 RCSB RD2 "Initial release" 2017-10-25 RCSB #