data_RDY # _chem_comp.id RDY _chem_comp.name "N-[(benzyloxy)carbonyl]-N-methyl-L-alanine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H15 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-02-10 _chem_comp.pdbx_modified_date 2020-05-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 237.252 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RDY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5R2B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RDY O3 O1 O 0 1 N N N 51.462 9.822 46.426 -0.566 -0.236 0.086 O3 RDY 1 RDY C4 C1 C 0 1 N N N 51.438 9.174 45.276 0.694 -0.538 0.452 C4 RDY 2 RDY C5 C2 C 0 1 N N N 51.049 8.973 47.534 -1.625 -0.590 1.014 C5 RDY 3 RDY C6 C3 C 0 1 Y N N 51.395 9.672 48.810 -2.956 -0.179 0.438 C6 RDY 4 RDY C7 C4 C 0 1 Y N N 50.635 10.725 49.322 -3.669 -1.061 -0.351 C7 RDY 5 RDY C8 C5 C 0 1 Y N N 50.989 11.332 50.514 -4.890 -0.684 -0.879 C8 RDY 6 RDY C9 C6 C 0 1 Y N N 52.119 10.928 51.186 -5.397 0.575 -0.617 C9 RDY 7 RDY C10 C7 C 0 1 Y N N 52.868 9.884 50.703 -4.684 1.457 0.173 C10 RDY 8 RDY C11 C8 C 0 1 Y N N 52.512 9.263 49.523 -3.465 1.078 0.705 C11 RDY 9 RDY O2 O2 O 0 1 N N N 50.986 8.073 45.174 0.903 -1.082 1.518 O2 RDY 10 RDY N N1 N 0 1 N N N 51.947 9.894 44.241 1.723 -0.237 -0.364 N RDY 11 RDY C3 C9 C 0 1 N N N 52.000 9.294 42.908 1.471 0.419 -1.650 C3 RDY 12 RDY C1 C10 C 0 1 N N S 52.523 11.233 44.381 3.095 -0.565 0.034 C1 RDY 13 RDY C2 C11 C 0 1 N N N 51.671 12.273 43.637 3.914 0.698 0.103 C2 RDY 14 RDY O1 O3 O 0 1 N N N 52.257 13.360 43.519 5.209 0.641 0.451 O1 RDY 15 RDY O O4 O 0 1 N N N 50.530 12.009 43.171 3.404 1.763 -0.154 O RDY 16 RDY C C12 C 0 1 N N N 53.966 11.290 43.900 3.710 -1.516 -0.993 C RDY 17 RDY H1 H1 H 0 1 N N N 49.964 8.800 47.486 -1.618 -1.668 1.179 H1 RDY 18 RDY H2 H2 H 0 1 N N N 51.577 8.009 47.482 -1.464 -0.076 1.961 H2 RDY 19 RDY H3 H3 H 0 1 N N N 49.764 11.069 48.784 -3.273 -2.045 -0.556 H3 RDY 20 RDY H4 H4 H 0 1 N N N 50.377 12.125 50.918 -5.447 -1.373 -1.497 H4 RDY 21 RDY H5 H5 H 0 1 N N N 52.417 11.432 52.093 -6.351 0.869 -1.030 H5 RDY 22 RDY H6 H6 H 0 1 N N N 53.738 9.548 51.248 -5.080 2.440 0.377 H6 RDY 23 RDY H7 H7 H 0 1 N N N 53.112 8.447 49.149 -2.910 1.765 1.326 H7 RDY 24 RDY H8 H8 H 0 1 N N N 51.538 8.296 42.936 1.320 -0.337 -2.420 H8 RDY 25 RDY H9 H9 H 0 1 N N N 51.453 9.931 42.197 0.580 1.041 -1.572 H9 RDY 26 RDY H10 H10 H 0 1 N N N 53.049 9.204 42.588 2.326 1.041 -1.914 H10 RDY 27 RDY H11 H11 H 0 1 N N N 52.516 11.503 45.447 3.083 -1.044 1.013 H11 RDY 28 RDY H12 H12 H 0 1 N N N 51.713 13.961 43.024 5.693 1.477 0.481 H12 RDY 29 RDY H13 H13 H 0 1 N N N 54.563 10.541 44.441 4.731 -1.760 -0.697 H13 RDY 30 RDY H14 H14 H 0 1 N N N 54.001 11.078 42.821 3.118 -2.430 -1.043 H14 RDY 31 RDY H15 H15 H 0 1 N N N 54.376 12.293 44.090 3.721 -1.037 -1.972 H15 RDY 32 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RDY C3 N SING N N 1 RDY O C2 DOUB N N 2 RDY O1 C2 SING N N 3 RDY C2 C1 SING N N 4 RDY C C1 SING N N 5 RDY N C1 SING N N 6 RDY N C4 SING N N 7 RDY O2 C4 DOUB N N 8 RDY C4 O3 SING N N 9 RDY O3 C5 SING N N 10 RDY C5 C6 SING N N 11 RDY C6 C7 DOUB Y N 12 RDY C6 C11 SING Y N 13 RDY C7 C8 SING Y N 14 RDY C11 C10 DOUB Y N 15 RDY C8 C9 DOUB Y N 16 RDY C10 C9 SING Y N 17 RDY C5 H1 SING N N 18 RDY C5 H2 SING N N 19 RDY C7 H3 SING N N 20 RDY C8 H4 SING N N 21 RDY C9 H5 SING N N 22 RDY C10 H6 SING N N 23 RDY C11 H7 SING N N 24 RDY C3 H8 SING N N 25 RDY C3 H9 SING N N 26 RDY C3 H10 SING N N 27 RDY C1 H11 SING N N 28 RDY O1 H12 SING N N 29 RDY C H13 SING N N 30 RDY C H14 SING N N 31 RDY C H15 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RDY SMILES ACDLabs 12.01 "O(Cc1ccccc1)C(=O)N(C(C(O)=O)C)C" RDY InChI InChI 1.03 "InChI=1S/C12H15NO4/c1-9(11(14)15)13(2)12(16)17-8-10-6-4-3-5-7-10/h3-7,9H,8H2,1-2H3,(H,14,15)/t9-/m0/s1" RDY InChIKey InChI 1.03 QGEQKVZQPWSOTI-VIFPVBQESA-N RDY SMILES_CANONICAL CACTVS 3.385 "C[C@H](N(C)C(=O)OCc1ccccc1)C(O)=O" RDY SMILES CACTVS 3.385 "C[CH](N(C)C(=O)OCc1ccccc1)C(O)=O" RDY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@H](C(=O)O)N(C)C(=O)OCc1ccccc1" RDY SMILES "OpenEye OEToolkits" 2.0.6 "CC(C(=O)O)N(C)C(=O)OCc1ccccc1" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RDY "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-N-methyl-L-alanine" RDY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-[methyl(phenylmethoxycarbonyl)amino]propanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RDY "Create component" 2020-02-10 RCSB RDY "Modify model coordinates code" 2020-03-19 RCSB RDY "Initial release" 2020-06-03 RCSB ##