data_RE3 # _chem_comp.id RE3 _chem_comp.name "3-[(3S)-3-hydroxy-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C11 H12 N2 O4" _chem_comp.mon_nstd_parent_comp_id TRP _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-02-03 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 236.224 _chem_comp.one_letter_code W _chem_comp.three_letter_code RE3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RE3 N N N 0 1 N N N Y Y N 10.540 -138.223 17.575 -2.047 -0.145 -1.645 N RE3 1 RE3 CA CA C 0 1 N N S Y N N 11.490 -138.189 16.493 -1.785 -0.376 -0.218 CA RE3 2 RE3 CB CB C 0 1 N N N N N N 12.193 -139.518 16.436 -1.026 0.820 0.361 CB RE3 3 RE3 CG CG C 0 1 N N S N N N 13.692 -139.627 16.691 0.321 0.962 -0.350 CG RE3 4 RE3 OG OG O 0 1 N N N N N N 14.130 -141.012 16.615 0.128 1.348 -1.713 OG RE3 5 RE3 CD1 CD1 C 0 1 N N N N N N 14.520 -138.792 15.693 1.197 1.966 0.369 CD1 RE3 6 RE3 OD1 OD1 O 0 1 N N N N N N 14.482 -138.962 14.499 0.953 3.141 0.543 OD1 RE3 7 RE3 NE1 NE1 N 0 1 N N N N N N 15.275 -137.867 16.343 2.296 1.309 0.779 NE1 RE3 8 RE3 CE2 CE2 C 0 1 Y N N N N N 15.039 -137.965 17.710 2.270 -0.039 0.420 CE2 RE3 9 RE3 CZ2 CZ2 C 0 1 Y N N N N N 15.648 -137.177 18.717 3.193 -1.059 0.644 CZ2 RE3 10 RE3 CH2 CH2 C 0 1 Y N N N N N 15.279 -137.439 20.072 2.941 -2.334 0.183 CH2 RE3 11 RE3 CZ3 CZ3 C 0 1 Y N N N N N 14.361 -138.481 20.382 1.773 -2.611 -0.504 CZ3 RE3 12 RE3 CE3 CE3 C 0 1 Y N N N N N 13.753 -139.274 19.364 0.852 -1.604 -0.730 CE3 RE3 13 RE3 CD2 CD2 C 0 1 Y N N N N N 14.128 -139.007 18.019 1.101 -0.330 -0.271 CD2 RE3 14 RE3 C C C 0 1 N N N Y N Y 10.687 -137.960 15.195 -3.092 -0.543 0.513 C RE3 15 RE3 O O O 0 1 N N N Y N Y 9.697 -138.704 14.958 -4.116 -0.132 0.021 O RE3 16 RE3 H HN H 0 1 N N N Y Y N 11.023 -138.370 18.438 -2.497 0.747 -1.790 HN RE3 17 RE3 HA H9 H 0 1 N N N Y N N 12.238 -137.393 16.627 -1.185 -1.278 -0.100 H9 RE3 18 RE3 H10 H10 H 0 1 N N N N N N 11.713 -140.143 17.203 -1.612 1.727 0.215 H10 RE3 19 RE3 H10A H10A H 0 0 N N N N N N 12.035 -139.896 15.415 -0.859 0.663 1.427 H10A RE3 20 RE3 HOG HOG H 0 1 N N N N N N 14.551 -141.166 15.777 0.950 1.453 -2.212 HOG RE3 21 RE3 HNE1 HNE1 H 0 0 N N N N N N 15.900 -137.219 15.908 3.023 1.725 1.269 HNE1 RE3 22 RE3 H17 H17 H 0 1 N N N N N N 16.364 -136.407 18.470 4.108 -0.850 1.179 H17 RE3 23 RE3 H18 H18 H 0 1 N N N N N N 15.700 -136.842 20.867 3.660 -3.120 0.359 H18 RE3 24 RE3 H19 H19 H 0 1 N N N N N N 14.118 -138.677 21.416 1.581 -3.611 -0.863 H19 RE3 25 RE3 H20 H20 H 0 1 N N N N N N 13.037 -140.046 19.605 -0.062 -1.816 -1.266 H20 RE3 26 RE3 H2 H2 H 0 1 N Y N Y Y N 10.047 -137.354 17.613 -1.197 -0.213 -2.184 H2 RE3 27 RE3 OXT OXT O 0 1 N Y N Y N Y ? ? ? -3.119 -1.148 1.710 OXT RE3 28 RE3 HXT HXT H 0 1 N Y N Y N Y ? ? ? -3.981 -1.232 2.141 HXT RE3 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RE3 CA N SING N N 1 RE3 N H SING N N 2 RE3 C CA SING N N 3 RE3 CB CA SING N N 4 RE3 CA HA SING N N 5 RE3 CB CG SING N N 6 RE3 CB H10 SING N N 7 RE3 CB H10A SING N N 8 RE3 CD1 CG SING N N 9 RE3 OG CG SING N N 10 RE3 CG CD2 SING N N 11 RE3 OG HOG SING N N 12 RE3 OD1 CD1 DOUB N N 13 RE3 CD1 NE1 SING N N 14 RE3 NE1 CE2 SING N N 15 RE3 NE1 HNE1 SING N N 16 RE3 CE2 CD2 DOUB Y N 17 RE3 CE2 CZ2 SING Y N 18 RE3 CZ2 CH2 DOUB Y N 19 RE3 CZ2 H17 SING N N 20 RE3 CH2 CZ3 SING Y N 21 RE3 CH2 H18 SING N N 22 RE3 CE3 CZ3 DOUB Y N 23 RE3 CZ3 H19 SING N N 24 RE3 CD2 CE3 SING Y N 25 RE3 CE3 H20 SING N N 26 RE3 O C DOUB N N 27 RE3 N H2 SING N N 28 RE3 C OXT SING N N 29 RE3 OXT HXT SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RE3 SMILES ACDLabs 12.01 "O=C(O)C(N)CC2(O)c1ccccc1NC2=O" RE3 SMILES_CANONICAL CACTVS 3.370 "N[C@@H](C[C@@]1(O)C(=O)Nc2ccccc12)C(O)=O" RE3 SMILES CACTVS 3.370 "N[CH](C[C]1(O)C(=O)Nc2ccccc12)C(O)=O" RE3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)[C@](C(=O)N2)(C[C@@H](C(=O)O)N)O" RE3 SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)C(C(=O)N2)(CC(C(=O)O)N)O" RE3 InChI InChI 1.03 "InChI=1S/C11H12N2O4/c12-7(9(14)15)5-11(17)6-3-1-2-4-8(6)13-10(11)16/h1-4,7,17H,5,12H2,(H,13,16)(H,14,15)/t7-,11-/m0/s1" RE3 InChIKey InChI 1.03 BZRCOYDQHJWPQZ-CPCISQLKSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RE3 "SYSTEMATIC NAME" ACDLabs 12.01 "3-[(3S)-3-hydroxy-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine" RE3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-3-[(3S)-3-hydroxy-2-oxo-1H-indol-3-yl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RE3 "Create component" 2011-02-03 RCSB RE3 "Modify aromatic_flag" 2011-06-04 RCSB RE3 "Modify descriptor" 2011-06-04 RCSB RE3 "Modify backbone" 2023-11-03 PDBE #