data_REG # _chem_comp.id REG _chem_comp.name "1-cyclopentyl-3-[[(2~{S})-oxolan-2-yl]methyl]urea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H20 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-02-10 _chem_comp.pdbx_modified_date 2020-05-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 212.289 _chem_comp.one_letter_code ? _chem_comp.three_letter_code REG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5R0L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal REG C4 C1 C 0 1 N N N 30.986 15.175 48.454 -3.478 0.379 1.155 C4 REG 1 REG C5 C2 C 0 1 N N N 32.262 14.451 45.477 -0.576 -0.472 -0.125 C5 REG 2 REG C6 C3 C 0 1 N N N 33.480 13.614 43.592 1.831 -0.828 0.002 C6 REG 3 REG N1 N1 N 0 1 N N N 33.270 14.610 44.622 0.667 -0.045 -0.420 N1 REG 4 REG C7 C4 C 0 1 N N S 34.758 12.826 43.755 3.111 -0.127 -0.456 C7 REG 5 REG C8 C5 C 0 1 N N N 35.147 12.602 45.181 4.346 -0.998 -0.133 C8 REG 6 REG C9 C6 C 0 1 N N N 36.565 12.727 45.127 5.428 0.025 0.282 C9 REG 7 REG C10 C7 C 0 1 N N N 36.740 13.825 44.185 4.719 1.392 0.159 C10 REG 8 REG O O1 O 0 1 N N N 31.813 13.366 45.683 -0.733 -1.508 0.491 O REG 9 REG N N2 N 0 1 N N N 31.828 15.513 46.132 -1.647 0.249 -0.513 N REG 10 REG C3 C8 C 0 1 N N N 30.662 15.419 46.995 -2.999 -0.215 -0.192 C3 REG 11 REG C2 C9 C 0 1 N N N 29.923 16.660 47.020 -4.028 0.351 -1.202 C2 REG 12 REG C1 C10 C 0 1 N N N 30.580 17.463 48.071 -5.367 0.316 -0.436 C1 REG 13 REG C C11 C 0 1 N N N 30.835 16.533 49.131 -5.017 0.334 1.062 C REG 14 REG O1 O2 O 0 1 N N N 35.803 13.598 43.183 3.312 1.091 0.292 O1 REG 15 REG H1 H1 H 0 1 N N N 30.284 14.448 48.888 -3.128 -0.231 1.988 H1 REG 16 REG H2 H2 H 0 1 N N N 32.015 14.802 48.563 -3.132 1.407 1.265 H2 REG 17 REG H3 H3 H 0 1 N N N 33.509 14.124 42.618 1.834 -0.918 1.088 H3 REG 18 REG H4 H4 H 0 1 N N N 32.634 12.911 43.613 1.781 -1.822 -0.445 H4 REG 19 REG H5 H5 H 0 1 N N N 33.873 15.405 44.690 0.792 0.782 -0.912 H5 REG 20 REG H6 H6 H 0 1 N N N 34.661 11.858 43.241 3.066 0.084 -1.525 H6 REG 21 REG H7 H7 H 0 1 N N N 34.704 13.363 45.840 4.128 -1.678 0.691 H7 REG 22 REG H8 H8 H 0 1 N N N 34.847 11.601 45.524 4.662 -1.555 -1.014 H8 REG 23 REG H9 H9 H 0 1 N N N 37.033 11.804 44.755 5.745 -0.150 1.309 H9 REG 24 REG H10 H10 H 0 1 N N N 36.981 12.978 46.114 6.281 -0.027 -0.395 H10 REG 25 REG H11 H11 H 0 1 N N N 37.758 13.818 43.770 5.041 2.060 0.958 H11 REG 26 REG H12 H12 H 0 1 N N N 36.552 14.790 44.678 4.922 1.839 -0.814 H12 REG 27 REG H13 H13 H 0 1 N N N 32.304 16.387 46.034 -1.522 1.076 -1.005 H13 REG 28 REG H14 H14 H 0 1 N N N 30.009 14.608 46.640 -3.036 -1.305 -0.169 H14 REG 29 REG H15 H15 H 0 1 N N N 29.985 17.169 46.047 -3.771 1.375 -1.474 H15 REG 30 REG H16 H16 H 0 1 N N N 28.868 16.479 47.272 -4.079 -0.280 -2.089 H16 REG 31 REG H17 H17 H 0 1 N N N 31.521 17.895 47.699 -5.965 1.191 -0.691 H17 REG 32 REG H18 H18 H 0 1 N N N 29.917 18.271 48.414 -5.913 -0.594 -0.681 H18 REG 33 REG H19 H19 H 0 1 N N N 31.759 16.802 49.664 -5.394 -0.568 1.544 H19 REG 34 REG H20 H20 H 0 1 N N N 29.994 16.518 49.840 -5.446 1.218 1.535 H20 REG 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal REG O1 C7 SING N N 1 REG O1 C10 SING N N 2 REG C6 C7 SING N N 3 REG C6 N1 SING N N 4 REG C7 C8 SING N N 5 REG C10 C9 SING N N 6 REG N1 C5 SING N N 7 REG C9 C8 SING N N 8 REG C5 O DOUB N N 9 REG C5 N SING N N 10 REG N C3 SING N N 11 REG C3 C2 SING N N 12 REG C3 C4 SING N N 13 REG C2 C1 SING N N 14 REG C1 C SING N N 15 REG C4 C SING N N 16 REG C4 H1 SING N N 17 REG C4 H2 SING N N 18 REG C6 H3 SING N N 19 REG C6 H4 SING N N 20 REG N1 H5 SING N N 21 REG C7 H6 SING N N 22 REG C8 H7 SING N N 23 REG C8 H8 SING N N 24 REG C9 H9 SING N N 25 REG C9 H10 SING N N 26 REG C10 H11 SING N N 27 REG C10 H12 SING N N 28 REG N H13 SING N N 29 REG C3 H14 SING N N 30 REG C2 H15 SING N N 31 REG C2 H16 SING N N 32 REG C1 H17 SING N N 33 REG C1 H18 SING N N 34 REG C H19 SING N N 35 REG C H20 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor REG InChI InChI 1.03 "InChI=1S/C11H20N2O2/c14-11(13-9-4-1-2-5-9)12-8-10-6-3-7-15-10/h9-10H,1-8H2,(H2,12,13,14)/t10-/m0/s1" REG InChIKey InChI 1.03 GZCFMEFTVSKHDE-JTQLQIEISA-N REG SMILES_CANONICAL CACTVS 3.385 "O=C(NC[C@@H]1CCCO1)NC2CCCC2" REG SMILES CACTVS 3.385 "O=C(NC[CH]1CCCO1)NC2CCCC2" REG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1CCC(C1)NC(=O)NC[C@@H]2CCCO2" REG SMILES "OpenEye OEToolkits" 2.0.6 "C1CCC(C1)NC(=O)NCC2CCCO2" # _pdbx_chem_comp_identifier.comp_id REG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "1-cyclopentyl-3-[[(2~{S})-oxolan-2-yl]methyl]urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site REG "Create component" 2020-02-10 RCSB REG "Other modification" 2020-03-13 RCSB REG "Initial release" 2020-06-03 RCSB ##