data_RGF # _chem_comp.id RGF _chem_comp.name "(8S)-6-(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)-6-azaspiro[3.4]octane-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 F N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-22 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.352 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RGF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SRU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RGF C18 C1 C 0 1 Y N N -44.265 -29.308 6.111 -0.450 3.464 0.384 C18 RGF 1 RGF C16 C2 C 0 1 Y N N -46.502 -29.220 6.186 -2.333 2.150 0.201 C16 RGF 2 RGF C13 C3 C 0 1 Y N N -48.983 -28.912 3.484 -2.180 -1.509 -0.204 C13 RGF 3 RGF C12 C4 C 0 1 Y N N -50.353 -28.867 3.658 -3.254 -2.365 -0.317 C12 RGF 4 RGF C11 C5 C 0 1 Y N N -50.895 -28.947 4.941 -4.550 -1.870 -0.277 C11 RGF 5 RGF C10 C6 C 0 1 Y N N -50.088 -29.068 6.059 -4.779 -0.517 -0.124 C10 RGF 6 RGF C20 C7 C 0 1 N N N -43.907 -28.480 2.025 1.618 0.016 1.231 C20 RGF 7 RGF C02 C8 C 0 1 N N N -46.469 -27.548 -0.552 4.161 -0.029 -1.197 C02 RGF 8 RGF C03 C9 C 0 1 N N S -45.625 -28.409 0.414 2.860 -0.660 -0.771 C03 RGF 9 RGF C04 C10 C 0 1 N N N -46.302 -28.594 1.778 1.674 0.274 -1.104 C04 RGF 10 RGF C06 C11 C 0 1 Y N N -45.396 -29.094 4.063 -0.118 1.196 0.135 C06 RGF 11 RGF C07 C12 C 0 1 Y N N -46.657 -29.111 4.764 -1.507 1.020 0.097 C07 RGF 12 RGF C08 C13 C 0 1 Y N N -48.108 -29.028 4.566 -2.398 -0.141 -0.049 C08 RGF 13 RGF C09 C14 C 0 1 Y N N -48.718 -29.095 5.850 -3.708 0.361 -0.008 C09 RGF 14 RGF C21 C15 C 0 1 N N N -44.333 -27.728 0.780 2.815 -0.816 0.753 C21 RGF 15 RGF C22 C16 C 0 1 N N N -43.176 -27.569 -0.271 2.868 -2.253 1.272 C22 RGF 16 RGF C23 C17 C 0 1 N N N -42.920 -26.135 0.280 4.394 -2.070 1.367 C23 RGF 17 RGF C24 C18 C 0 1 N N N -44.349 -26.158 0.851 4.132 -0.558 1.484 C24 RGF 18 RGF F14 F1 F 0 1 N N N -52.191 -28.914 5.099 -5.596 -2.719 -0.389 F14 RGF 19 RGF N05 N1 N 0 1 N N N -45.159 -29.039 2.633 0.735 0.111 0.036 N05 RGF 20 RGF N15 N2 N 0 1 Y N N -47.742 -29.219 6.825 -3.641 1.738 0.128 N15 RGF 21 RGF N17 N3 N 0 1 Y N N -45.356 -29.326 6.881 -1.760 3.345 0.342 N17 RGF 22 RGF N19 N4 N 0 1 Y N N -44.224 -29.206 4.772 0.361 2.428 0.284 N19 RGF 23 RGF O01 O1 O 0 1 N N N -47.350 -26.767 -0.081 5.190 -0.803 -1.575 O01 RGF 24 RGF O25 O2 O 0 1 N N N -46.204 -27.643 -1.785 4.277 1.174 -1.197 O25 RGF 25 RGF H181 H1 H 0 0 N N N -43.315 -29.383 6.619 -0.022 4.449 0.499 H181 RGF 26 RGF H131 H2 H 0 0 N N N -48.578 -28.856 2.484 -1.173 -1.896 -0.235 H131 RGF 27 RGF H121 H3 H 0 0 N N N -51.004 -28.770 2.801 -3.086 -3.425 -0.437 H121 RGF 28 RGF H101 H4 H 0 0 N N N -50.508 -29.138 7.052 -5.791 -0.141 -0.095 H101 RGF 29 RGF H202 H5 H 0 0 N N N -43.217 -29.294 1.760 1.102 -0.491 2.046 H202 RGF 30 RGF H201 H6 H 0 0 N N N -43.413 -27.797 2.732 1.942 1.009 1.544 H201 RGF 31 RGF H031 H7 H 0 0 N N N -45.424 -29.390 -0.041 2.732 -1.628 -1.257 H031 RGF 32 RGF H041 H8 H 0 0 N N N -46.730 -27.649 2.143 2.012 1.308 -1.173 H041 RGF 33 RGF H042 H9 H 0 0 N N N -47.090 -29.360 1.733 1.197 -0.034 -2.035 H042 RGF 34 RGF H222 H10 H 0 0 N N N -43.507 -27.600 -1.319 2.383 -2.386 2.239 H222 RGF 35 RGF H221 H11 H 0 0 N N N -42.336 -28.266 -0.131 2.561 -2.995 0.536 H221 RGF 36 RGF H232 H12 H 0 0 N N N -42.126 -26.072 1.039 4.831 -2.508 2.264 H232 RGF 37 RGF H231 H13 H 0 0 N N N -42.749 -25.372 -0.494 4.924 -2.352 0.457 H231 RGF 38 RGF H241 H14 H 0 0 N N N -44.435 -25.753 1.870 4.834 0.053 0.917 H241 RGF 39 RGF H242 H15 H 0 0 N N N -45.102 -25.684 0.204 4.003 -0.214 2.510 H242 RGF 40 RGF H151 H16 H 0 0 N N N -47.898 -29.294 7.810 -4.411 2.328 0.175 H151 RGF 41 RGF H1 H17 H 0 1 N N N -47.759 -26.285 -0.791 6.004 -0.352 -1.839 H1 RGF 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RGF O25 C02 DOUB N N 1 RGF C02 O01 SING N N 2 RGF C02 C03 SING N N 3 RGF C22 C23 SING N N 4 RGF C22 C21 SING N N 5 RGF C23 C24 SING N N 6 RGF C03 C21 SING N N 7 RGF C03 C04 SING N N 8 RGF C21 C24 SING N N 9 RGF C21 C20 SING N N 10 RGF C04 N05 SING N N 11 RGF C20 N05 SING N N 12 RGF N05 C06 SING N N 13 RGF C13 C12 DOUB Y N 14 RGF C13 C08 SING Y N 15 RGF C12 C11 SING Y N 16 RGF C06 C07 DOUB Y N 17 RGF C06 N19 SING Y N 18 RGF C08 C07 SING Y N 19 RGF C08 C09 DOUB Y N 20 RGF C07 C16 SING Y N 21 RGF N19 C18 DOUB Y N 22 RGF C11 F14 SING N N 23 RGF C11 C10 DOUB Y N 24 RGF C09 C10 SING Y N 25 RGF C09 N15 SING Y N 26 RGF C18 N17 SING Y N 27 RGF C16 N15 SING Y N 28 RGF C16 N17 DOUB Y N 29 RGF C18 H181 SING N N 30 RGF C13 H131 SING N N 31 RGF C12 H121 SING N N 32 RGF C10 H101 SING N N 33 RGF C20 H202 SING N N 34 RGF C20 H201 SING N N 35 RGF C03 H031 SING N N 36 RGF C04 H041 SING N N 37 RGF C04 H042 SING N N 38 RGF C22 H222 SING N N 39 RGF C22 H221 SING N N 40 RGF C23 H232 SING N N 41 RGF C23 H231 SING N N 42 RGF C24 H241 SING N N 43 RGF C24 H242 SING N N 44 RGF N15 H151 SING N N 45 RGF O01 H1 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RGF SMILES ACDLabs 12.01 "O=C(O)C1CN(CC21CCC2)c1ncnc2[NH]c3cc(F)ccc3c12" RGF InChI InChI 1.06 "InChI=1S/C18H17FN4O2/c19-10-2-3-11-13(6-10)22-15-14(11)16(21-9-20-15)23-7-12(17(24)25)18(8-23)4-1-5-18/h2-3,6,9,12H,1,4-5,7-8H2,(H,24,25)(H,20,21,22)/t12-/m0/s1" RGF InChIKey InChI 1.06 RJMONMRVOQBIPJ-LBPRGKRZSA-N RGF SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1CN(CC12CCC2)c3ncnc4[nH]c5cc(F)ccc5c34" RGF SMILES CACTVS 3.385 "OC(=O)[CH]1CN(CC12CCC2)c3ncnc4[nH]c5cc(F)ccc5c34" RGF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1F)[nH]c3c2c(ncn3)N4C[C@H](C5(C4)CCC5)C(=O)O" RGF SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1F)[nH]c3c2c(ncn3)N4CC(C5(C4)CCC5)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RGF "SYSTEMATIC NAME" ACDLabs 12.01 "(8S)-6-(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)-6-azaspiro[3.4]octane-8-carboxylic acid" RGF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(8~{S})-6-(7-fluoranyl-9~{H}-pyrimido[4,5-b]indol-4-yl)-6-azaspiro[3.4]octane-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RGF "Create component" 2022-06-22 RCSB RGF "Initial release" 2022-07-06 RCSB #