data_RH0 # _chem_comp.id RH0 _chem_comp.name "3-amino-5-S-benzyl-2,3-dideoxy-5-thio-D-erythro-pentonic acid" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H17 N O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-09 _chem_comp.pdbx_modified_date 2012-01-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 255.333 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RH0 _chem_comp.pdbx_model_coordinates_details "not provided" _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1RHQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RH0 N N N 0 1 N N N 53.891 -10.716 88.072 -2.985 1.637 0.031 N RH0 1 RH0 C1 C1 C 0 1 N N S 52.669 -10.355 88.791 -2.931 0.177 0.183 C1 RH0 2 RH0 C2 C2 C 0 1 N N S 51.841 -9.331 87.978 -1.586 -0.340 -0.331 C2 RH0 3 RH0 O1 O1 O 0 1 N N N 50.751 -8.875 88.802 -1.533 -1.760 -0.182 O1 RH0 4 RH0 C3 C3 C 0 1 N N N 53.013 -9.780 90.161 -4.064 -0.462 -0.622 C3 RH0 5 RH0 C C C 0 1 N N N 53.213 -10.849 91.195 -5.390 -0.048 -0.038 C RH0 6 RH0 O O O 0 1 N N N 52.266 -11.152 91.933 -5.425 0.682 0.924 O RH0 7 RH0 OXT OXT O 0 1 N Y N 54.314 -11.400 91.266 -6.533 -0.492 -0.585 OXT RH0 8 RH0 C5 C5 C 0 1 N N N 51.242 -10.060 86.763 -0.452 0.299 0.474 C5 RH0 9 RH0 S1 S1 S 0 1 N N N 50.466 -8.944 85.597 1.144 -0.199 -0.229 S1 RH0 10 RH0 C6 C6 C 0 1 N N N 49.122 -8.310 86.567 2.342 0.644 0.842 C6 RH0 11 RH0 C7 C7 C 0 1 Y N N 47.941 -7.918 85.725 3.740 0.325 0.379 C7 RH0 12 RH0 C8 C8 C 0 1 Y N N 46.817 -7.347 86.314 4.359 1.131 -0.558 C8 RH0 13 RH0 C9 C9 C 0 1 Y N N 45.724 -6.941 85.541 5.642 0.838 -0.982 C9 RH0 14 RH0 C10 C10 C 0 1 Y N N 45.759 -7.114 84.160 6.306 -0.260 -0.469 C10 RH0 15 RH0 C11 C11 C 0 1 Y N N 46.873 -7.687 83.567 5.687 -1.066 0.468 C11 RH0 16 RH0 C12 C12 C 0 1 Y N N 47.955 -8.087 84.341 4.406 -0.771 0.896 C12 RH0 17 RH0 H H H 0 1 N N N 54.413 -11.377 88.611 -2.286 2.087 0.604 H RH0 18 RH0 H1 H1 H 0 1 N N N 52.065 -11.264 88.927 -3.042 -0.082 1.236 H1 RH0 19 RH0 H3 H3 H 0 1 N N N 53.944 -9.201 90.073 -4.005 -0.131 -1.659 H3 RH0 20 RH0 H4 H4 H 0 1 N N N 52.186 -9.131 90.485 -3.972 -1.547 -0.581 H4 RH0 21 RH0 HXT HXT H 0 1 N Y N 54.296 -12.058 91.951 -7.359 -0.200 -0.176 HXT RH0 22 RH0 H6 H6 H 0 1 N N N 52.052 -10.594 86.245 -0.545 1.384 0.434 H6 RH0 23 RH0 H7 H7 H 0 1 N N N 50.482 -10.768 87.124 -0.512 -0.032 1.511 H7 RH0 24 RH0 H8 H8 H 0 1 N N N 48.803 -9.091 87.273 2.179 1.721 0.792 H8 RH0 25 RH0 H9 H9 H 0 1 N N N 49.473 -7.421 87.111 2.213 0.304 1.869 H9 RH0 26 RH0 H10 H10 H 0 1 N N N 46.788 -7.215 87.386 3.841 1.990 -0.959 H10 RH0 27 RH0 H11 H11 H 0 1 N N N 44.860 -6.497 86.012 6.125 1.468 -1.714 H11 RH0 28 RH0 H12 H12 H 0 1 N N N 44.921 -6.803 83.553 7.308 -0.489 -0.801 H12 RH0 29 RH0 H13 H13 H 0 1 N N N 46.900 -7.823 82.496 6.206 -1.924 0.869 H13 RH0 30 RH0 H14 H14 H 0 1 N N N 48.816 -8.534 83.866 3.924 -1.398 1.631 H14 RH0 31 RH0 H2 H2 H 0 1 N Y N 53.651 -11.121 87.190 -2.884 1.904 -0.938 H2 RH0 32 RH0 H16 H16 H 0 1 N N N 52.471 -8.487 87.661 -1.475 -0.080 -1.383 H16 RH0 33 RH0 H17 H17 H 0 1 N N N 50.230 -8.244 88.319 -1.626 -2.064 0.731 H17 RH0 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RH0 N C1 SING N N 1 RH0 N H SING N N 2 RH0 C1 C2 SING N N 3 RH0 C1 C3 SING N N 4 RH0 C1 H1 SING N N 5 RH0 C2 O1 SING N N 6 RH0 C2 C5 SING N N 7 RH0 C3 C SING N N 8 RH0 C3 H3 SING N N 9 RH0 C3 H4 SING N N 10 RH0 C O DOUB N N 11 RH0 C OXT SING N N 12 RH0 OXT HXT SING N N 13 RH0 C5 S1 SING N N 14 RH0 C5 H6 SING N N 15 RH0 C5 H7 SING N N 16 RH0 S1 C6 SING N N 17 RH0 C6 C7 SING N N 18 RH0 C6 H8 SING N N 19 RH0 C6 H9 SING N N 20 RH0 C7 C8 DOUB Y N 21 RH0 C7 C12 SING Y N 22 RH0 C8 C9 SING Y N 23 RH0 C8 H10 SING N N 24 RH0 C9 C10 DOUB Y N 25 RH0 C9 H11 SING N N 26 RH0 C10 C11 SING Y N 27 RH0 C10 H12 SING N N 28 RH0 C11 C12 DOUB Y N 29 RH0 C11 H13 SING N N 30 RH0 C12 H14 SING N N 31 RH0 N H2 SING N N 32 RH0 C2 H16 SING N N 33 RH0 O1 H17 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RH0 SMILES ACDLabs 12.01 "O=C(O)CC(N)C(O)CSCc1ccccc1" RH0 SMILES_CANONICAL CACTVS 3.370 "N[C@@H](CC(O)=O)[C@H](O)CSCc1ccccc1" RH0 SMILES CACTVS 3.370 "N[CH](CC(O)=O)[CH](O)CSCc1ccccc1" RH0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CSC[C@H]([C@H](CC(=O)O)N)O" RH0 SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CSCC(C(CC(=O)O)N)O" RH0 InChI InChI 1.03 "InChI=1S/C12H17NO3S/c13-10(6-12(15)16)11(14)8-17-7-9-4-2-1-3-5-9/h1-5,10-11,14H,6-8,13H2,(H,15,16)/t10-,11+/m0/s1" RH0 InChIKey InChI 1.03 GEDFPMRZBOLEQA-WDEREUQCSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RH0 "SYSTEMATIC NAME" ACDLabs 12.01 "3-amino-5-S-benzyl-2,3-dideoxy-5-thio-D-erythro-pentonic acid" RH0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(3S,4S)-3-azanyl-5-benzylsulfanyl-4-hydroxy-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RH0 "Create component" 2010-10-09 RCSB RH0 "Modify aromatic_flag" 2011-06-04 RCSB RH0 "Modify descriptor" 2011-06-04 RCSB #