data_RHQ # _chem_comp.id RHQ _chem_comp.name "RHODAMINE 6G" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H31 N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2001-09-12 _chem_comp.pdbx_modified_date 2012-01-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 443.557 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RHQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JUS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RHQ C1 C1 C 0 1 Y N N -63.534 -46.259 1.538 1.288 1.761 -0.000 C1 RHQ 1 RHQ C2 C2 C 0 1 Y N N -63.304 -46.069 3.025 1.366 0.380 0.474 C2 RHQ 2 RHQ C3 C3 C 0 1 Y N N -61.968 -45.537 3.481 2.617 -0.259 0.609 C3 RHQ 3 RHQ C4 C4 C 0 1 Y N N -60.910 -45.229 2.430 3.752 0.408 0.300 C4 RHQ 4 RHQ C5 C5 C 0 1 Y N N -61.181 -45.466 1.025 3.684 1.789 -0.174 C5 RHQ 5 RHQ C6 C6 C 0 1 Y N N -62.469 -45.956 0.486 2.435 2.431 -0.312 C6 RHQ 6 RHQ O1 O1 O 0 1 Y N N -64.764 -46.769 0.917 0.091 2.372 -0.136 O1 RHQ 7 RHQ C7 C7 C 0 1 Y N N -65.828 -47.137 1.924 -1.072 1.752 0.155 C7 RHQ 8 RHQ C8 C8 C 0 1 Y N N -65.651 -46.980 3.477 -1.090 0.422 0.618 C8 RHQ 9 RHQ C9 C9 C 0 1 Y N N -64.406 -46.437 4.202 0.175 -0.299 0.792 C9 RHQ 10 RHQ C10 C10 C 0 1 Y N N -67.021 -47.651 1.355 -2.272 2.430 -0.003 C10 RHQ 11 RHQ C11 C11 C 0 1 Y N N -68.198 -48.123 2.197 -3.470 1.796 0.295 C11 RHQ 12 RHQ C12 C12 C 0 1 Y N N -68.099 -47.989 3.747 -3.480 0.477 0.754 C12 RHQ 13 RHQ C13 C13 C 0 1 Y N N -66.896 -47.460 4.353 -2.309 -0.203 0.914 C13 RHQ 14 RHQ N1 N1 N 0 1 N N N -69.233 -48.669 1.410 -4.670 2.480 0.136 N1 RHQ 15 RHQ C14 C14 C 0 1 Y N N -63.999 -46.533 5.811 0.199 -1.693 1.273 C14 RHQ 16 RHQ C15 C15 C 0 1 Y N N -63.712 -47.876 6.370 0.597 -1.978 2.580 C15 RHQ 17 RHQ C16 C16 C 0 1 Y N N -63.307 -48.111 7.883 0.616 -3.285 3.026 C16 RHQ 18 RHQ C17 C17 C 0 1 Y N N -63.197 -46.944 8.856 0.242 -4.319 2.184 C17 RHQ 19 RHQ C18 C18 C 0 1 Y N N -63.469 -45.615 8.330 -0.155 -4.058 0.887 C18 RHQ 20 RHQ C19 C19 C 0 1 Y N N -63.840 -45.424 6.926 -0.188 -2.746 0.419 C19 RHQ 21 RHQ C20 C20 C 0 1 N N N -69.231 -48.441 4.743 -4.789 -0.197 1.073 C20 RHQ 22 RHQ C21 C21 C 0 1 N N N -59.434 -44.698 2.822 5.089 -0.273 0.444 C21 RHQ 23 RHQ C22 C22 C 0 1 N N N -70.771 -48.723 1.676 -4.667 3.864 -0.345 C22 RHQ 24 RHQ C23 C23 C 0 1 N N N -71.124 -50.099 2.388 -6.106 4.377 -0.430 C23 RHQ 25 RHQ N2 N2 N 1 1 N N N -60.356 -45.317 -0.179 4.799 2.441 -0.477 N2 RHQ 26 RHQ C24 C24 C 0 1 N N N -58.973 -44.915 -0.487 6.052 1.704 -0.659 C24 RHQ 27 RHQ C25 C25 C 0 1 N N N -59.092 -43.851 -1.673 7.116 2.641 -1.234 C25 RHQ 28 RHQ C26 C26 C 0 1 N N N -64.034 -44.038 6.676 -0.617 -2.461 -0.965 C26 RHQ 29 RHQ O27 O27 O 0 1 N N N -63.414 -43.549 5.603 -0.639 -1.316 -1.370 O27 RHQ 30 RHQ O2 O2 O 0 1 N N N -64.908 -43.299 7.642 -0.985 -3.471 -1.778 O2 RHQ 31 RHQ C28 C28 C 0 1 N N N -65.282 -41.860 7.604 -1.396 -3.117 -3.125 C28 RHQ 32 RHQ C29 C29 C 0 1 N N N -64.975 -41.229 6.234 -1.774 -4.385 -3.892 C29 RHQ 33 RHQ H31 1H3 H 0 1 N N N -61.770 -45.377 4.554 2.668 -1.279 0.960 H31 RHQ 34 RHQ H61 1H6 H 0 1 N N N -62.621 -46.083 -0.599 2.387 3.451 -0.663 H61 RHQ 35 RHQ H101 1H10 H 0 0 N N N -67.033 -47.683 0.252 -2.274 3.450 -0.357 H101 RHQ 36 RHQ H131 1H13 H 0 0 N N N -66.927 -47.423 5.455 -2.321 -1.223 1.269 H131 RHQ 37 RHQ HN11 1HN1 H 0 0 N N N -68.957 -49.636 1.243 -5.510 2.040 0.343 HN11 RHQ 38 RHQ H151 1H15 H 0 0 N N N -63.800 -48.709 5.652 0.890 -1.177 3.242 H151 RHQ 39 RHQ H161 1H16 H 0 0 N N N -63.094 -49.121 8.272 0.925 -3.502 4.037 H161 RHQ 40 RHQ H171 1H17 H 0 0 N N N -62.926 -47.058 9.919 0.261 -5.337 2.545 H171 RHQ 41 RHQ H181 1H18 H 0 0 N N N -63.393 -44.743 9.002 -0.445 -4.870 0.237 H181 RHQ 42 RHQ H201 1H20 H 0 0 N N N -69.160 -48.345 5.851 -5.168 -0.696 0.181 H201 RHQ 43 RHQ H202 2H20 H 0 0 N N N -70.168 -47.925 4.429 -4.636 -0.932 1.863 H202 RHQ 44 RHQ H203 3H20 H 0 0 N N N -69.455 -49.510 4.520 -5.510 0.550 1.406 H203 RHQ 45 RHQ H211 1H21 H 0 0 N N N -58.659 -44.472 2.052 4.943 -1.279 0.836 H211 RHQ 46 RHQ H212 2H21 H 0 0 N N N -59.558 -43.787 3.453 5.575 -0.329 -0.530 H212 RHQ 47 RHQ H213 3H21 H 0 0 N N N -58.993 -45.425 3.542 5.715 0.298 1.130 H213 RHQ 48 RHQ H221 1H22 H 0 0 N N N -71.133 -47.840 2.253 -4.099 4.487 0.346 H221 RHQ 49 RHQ H222 2H22 H 0 0 N N N -71.368 -48.558 0.749 -4.208 3.904 -1.333 H222 RHQ 50 RHQ H231 1H23 H 0 0 N N N -72.222 -50.137 2.577 -6.103 5.407 -0.787 H231 RHQ 51 RHQ H232 2H23 H 0 0 N N N -70.761 -50.981 1.810 -6.674 3.754 -1.120 H232 RHQ 52 RHQ H233 3H23 H 0 0 N N N -70.526 -50.263 3.315 -6.565 4.337 0.558 H233 RHQ 53 RHQ HN21 1HN2 H 0 0 N N N -60.880 -45.554 -1.021 4.786 3.406 -0.577 HN21 RHQ 54 RHQ H241 1H24 H 0 0 N N N -58.407 -44.539 0.397 6.390 1.318 0.303 H241 RHQ 55 RHQ H242 2H24 H 0 0 N N N -58.298 -45.771 -0.719 5.889 0.874 -1.347 H242 RHQ 56 RHQ H251 1H25 H 0 0 N N N -58.045 -43.546 -1.906 8.048 2.093 -1.370 H251 RHQ 57 RHQ H252 2H25 H 0 0 N N N -59.657 -44.227 -2.557 6.779 3.027 -2.196 H252 RHQ 58 RHQ H253 3H25 H 0 0 N N N -59.766 -42.994 -1.440 7.280 3.471 -0.547 H253 RHQ 59 RHQ H281 1H28 H 0 0 N N N -66.348 -41.709 7.891 -2.256 -2.449 -3.079 H281 RHQ 60 RHQ H282 2H28 H 0 0 N N N -64.796 -41.291 8.431 -0.574 -2.615 -3.635 H282 RHQ 61 RHQ H291 1H29 H 0 0 N N N -65.255 -40.150 6.205 -0.913 -5.052 -3.939 H291 RHQ 62 RHQ H292 2H29 H 0 0 N N N -63.908 -41.379 5.946 -2.596 -4.887 -3.382 H292 RHQ 63 RHQ H293 3H29 H 0 0 N N N -65.460 -41.797 5.406 -2.082 -4.119 -4.904 H293 RHQ 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RHQ C1 C2 SING Y N 1 RHQ C1 C6 DOUB Y N 2 RHQ C1 O1 SING Y N 3 RHQ C2 C3 SING Y N 4 RHQ C2 C9 DOUB Y N 5 RHQ C3 C4 DOUB Y N 6 RHQ C3 H31 SING N N 7 RHQ C4 C5 SING Y N 8 RHQ C4 C21 SING N N 9 RHQ C5 C6 SING Y N 10 RHQ C5 N2 DOUB N Z 11 RHQ C6 H61 SING N N 12 RHQ O1 C7 SING Y N 13 RHQ C7 C8 DOUB Y N 14 RHQ C7 C10 SING Y N 15 RHQ C8 C9 SING Y N 16 RHQ C8 C13 SING Y N 17 RHQ C9 C14 SING Y N 18 RHQ C10 C11 DOUB Y N 19 RHQ C10 H101 SING N N 20 RHQ C11 C12 SING Y N 21 RHQ C11 N1 SING N N 22 RHQ C12 C13 DOUB Y N 23 RHQ C12 C20 SING N N 24 RHQ C13 H131 SING N N 25 RHQ N1 C22 SING N N 26 RHQ N1 HN11 SING N N 27 RHQ C14 C15 DOUB Y N 28 RHQ C14 C19 SING Y N 29 RHQ C15 C16 SING Y N 30 RHQ C15 H151 SING N N 31 RHQ C16 C17 DOUB Y N 32 RHQ C16 H161 SING N N 33 RHQ C17 C18 SING Y N 34 RHQ C17 H171 SING N N 35 RHQ C18 C19 DOUB Y N 36 RHQ C18 H181 SING N N 37 RHQ C19 C26 SING N N 38 RHQ C20 H201 SING N N 39 RHQ C20 H202 SING N N 40 RHQ C20 H203 SING N N 41 RHQ C21 H211 SING N N 42 RHQ C21 H212 SING N N 43 RHQ C21 H213 SING N N 44 RHQ C22 C23 SING N N 45 RHQ C22 H221 SING N N 46 RHQ C22 H222 SING N N 47 RHQ C23 H231 SING N N 48 RHQ C23 H232 SING N N 49 RHQ C23 H233 SING N N 50 RHQ N2 C24 SING N N 51 RHQ N2 HN21 SING N N 52 RHQ C24 C25 SING N N 53 RHQ C24 H241 SING N N 54 RHQ C24 H242 SING N N 55 RHQ C25 H251 SING N N 56 RHQ C25 H252 SING N N 57 RHQ C25 H253 SING N N 58 RHQ C26 O27 DOUB N N 59 RHQ C26 O2 SING N N 60 RHQ O2 C28 SING N N 61 RHQ C28 C29 SING N N 62 RHQ C28 H281 SING N N 63 RHQ C28 H282 SING N N 64 RHQ C29 H291 SING N N 65 RHQ C29 H292 SING N N 66 RHQ C29 H293 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RHQ SMILES ACDLabs 10.04 "O=C(OCC)c4ccccc4C=1c3c(OC=2C=1C=C(\C(=[NH+]/CC)C=2)C)cc(c(c3)C)NCC" RHQ InChI InChI 1.03 "InChI=1S/C28H30N2O3/c1-6-29-23-15-25-21(13-17(23)4)27(19-11-9-10-12-20(19)28(31)32-8-3)22-14-18(5)24(30-7-2)16-26(22)33-25/h9-16,29H,6-8H2,1-5H3/p+1/b30-24-" RHQ InChIKey InChI 1.03 IWWWBRIIGAXLCJ-KRUMMXJUSA-O RHQ SMILES_CANONICAL CACTVS 3.385 "CCNc1cc2OC3=CC(=[NH+]CC)C(=CC3=C(c4ccccc4C(=O)OCC)c2cc1C)C" RHQ SMILES CACTVS 3.385 "CCNc1cc2OC3=CC(=[NH+]CC)C(=CC3=C(c4ccccc4C(=O)OCC)c2cc1C)C" RHQ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "CCNc1cc2c(cc1C)C(=C3C=C(/C(=[NH+]\CC)/C=C3O2)C)c4ccccc4C(=O)OCC" RHQ SMILES "OpenEye OEToolkits" 1.7.5 "CCNc1cc2c(cc1C)C(=C3C=C(C(=[NH+]CC)C=C3O2)C)c4ccccc4C(=O)OCC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RHQ "SYSTEMATIC NAME" ACDLabs 10.04 "N-[(3Z)-9-[2-(ethoxycarbonyl)phenyl]-6-(ethylamino)-2,7-dimethyl-3H-xanthen-3-ylidene]ethanaminium" RHQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(Z)-[9-(2-ethoxycarbonylphenyl)-6-ethylamino-2,7-dimethyl-xanthen-3-ylidene]-ethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RHQ "Create component" 2001-09-12 RCSB RHQ "Modify aromatic_flag" 2011-06-04 RCSB RHQ "Modify descriptor" 2011-06-04 RCSB RHQ "Modify descriptor" 2012-01-05 RCSB RHQ "Modify coordinates" 2012-01-05 RCSB #