data_RHT # _chem_comp.id RHT _chem_comp.name "4-(3-methylbenzimidazol-5-yl)pyridine-2,6-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H13 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-30 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 239.276 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RHT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AJ7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RHT C1 C1 C 0 1 N N N 44.105 2.385 16.082 3.655 2.457 0.003 C1 RHT 1 RHT N1 N1 N 0 1 Y N N 44.153 3.806 16.375 3.578 0.994 0.000 N1 RHT 2 RHT C2 C2 C 0 1 Y N N 44.537 4.414 17.522 4.630 0.132 -0.004 C2 RHT 3 RHT N2 N2 N 0 1 Y N N 44.444 5.723 17.497 4.201 -1.097 -0.005 N2 RHT 4 RHT C3 C3 C 0 1 Y N N 43.968 6.000 16.221 2.844 -1.107 -0.003 C3 RHT 5 RHT N3 N3 N 0 1 N N N 41.711 3.767 9.350 -4.571 -1.867 0.001 N3 RHT 6 RHT C4 C4 C 0 1 Y N N 43.667 7.209 15.602 1.890 -2.131 -0.002 C4 RHT 7 RHT N4 N4 N 0 1 Y N N 41.208 5.988 9.650 -3.995 0.408 -0.002 N4 RHT 8 RHT C5 C5 C 0 1 Y N N 43.193 7.182 14.305 0.561 -1.826 0.001 C5 RHT 9 RHT N5 N5 N 0 1 N N N 40.656 8.212 9.902 -3.572 2.717 -0.004 N5 RHT 10 RHT C6 C6 C 0 1 Y N N 43.011 5.981 13.571 0.138 -0.493 0.004 C6 RHT 11 RHT C7 C7 C 0 1 Y N N 43.302 4.783 14.221 1.072 0.537 0.004 C7 RHT 12 RHT C8 C8 C 0 1 Y N N 43.783 4.810 15.519 2.424 0.235 0.007 C8 RHT 13 RHT C9 C9 C 0 1 Y N N 42.429 5.988 12.192 -1.311 -0.177 0.002 C9 RHT 14 RHT C10 C10 C 0 1 Y N N 42.367 4.830 11.406 -2.266 -1.196 0.002 C10 RHT 15 RHT C11 C11 C 0 1 Y N N 41.767 4.862 10.130 -3.612 -0.860 0.000 C11 RHT 16 RHT C12 C12 C 0 1 Y N N 41.228 7.105 10.409 -3.119 1.403 -0.002 C12 RHT 17 RHT C13 C13 C 0 1 Y N N 41.809 7.129 11.690 -1.755 1.148 -0.000 C13 RHT 18 RHT H1 H1 H 0 1 N N N 44.462 1.818 16.954 3.671 2.822 -1.024 H1 RHT 19 RHT H2 H2 H 0 1 N N N 43.070 2.093 15.853 2.786 2.866 0.519 H2 RHT 20 RHT H3 H3 H 0 1 N N N 44.747 2.167 15.216 4.564 2.773 0.515 H3 RHT 21 RHT H4 H4 H 0 1 N N N 44.890 3.868 18.385 5.669 0.424 -0.006 H4 RHT 22 RHT H5 H5 H 0 1 N N N 41.237 3.988 8.498 -5.514 -1.639 -0.001 H5 RHT 23 RHT H6 H6 H 0 1 N N N 42.639 3.457 9.144 -4.297 -2.798 0.002 H6 RHT 24 RHT H7 H7 H 0 1 N N N 43.801 8.146 16.123 2.207 -3.163 -0.005 H7 RHT 25 RHT H8 H8 H 0 1 N N N 42.949 8.119 13.827 -0.170 -2.620 0.001 H8 RHT 26 RHT H9 H9 H 0 1 N N N 40.289 8.012 8.993 -4.524 2.902 -0.005 H9 RHT 27 RHT H10 H10 H 0 1 N N N 39.914 8.509 10.503 -2.936 3.449 -0.004 H10 RHT 28 RHT H11 H11 H 0 1 N N N 43.153 3.840 13.716 0.746 1.567 0.007 H11 RHT 29 RHT H12 H12 H 0 1 N N N 42.782 3.906 11.780 -1.960 -2.232 0.003 H12 RHT 30 RHT H13 H13 H 0 1 N N N 41.774 8.031 12.283 -1.046 1.962 -0.000 H13 RHT 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RHT N3 C11 SING N N 1 RHT N4 C11 DOUB Y N 2 RHT N4 C12 SING Y N 3 RHT N5 C12 SING N N 4 RHT C11 C10 SING Y N 5 RHT C12 C13 DOUB Y N 6 RHT C10 C9 DOUB Y N 7 RHT C13 C9 SING Y N 8 RHT C9 C6 SING N N 9 RHT C6 C7 DOUB Y N 10 RHT C6 C5 SING Y N 11 RHT C7 C8 SING Y N 12 RHT C5 C4 DOUB Y N 13 RHT C8 C3 DOUB Y N 14 RHT C8 N1 SING Y N 15 RHT C4 C3 SING Y N 16 RHT C1 N1 SING N N 17 RHT C3 N2 SING Y N 18 RHT N1 C2 SING Y N 19 RHT N2 C2 DOUB Y N 20 RHT C1 H1 SING N N 21 RHT C1 H2 SING N N 22 RHT C1 H3 SING N N 23 RHT C2 H4 SING N N 24 RHT N3 H5 SING N N 25 RHT N3 H6 SING N N 26 RHT C4 H7 SING N N 27 RHT C5 H8 SING N N 28 RHT N5 H9 SING N N 29 RHT N5 H10 SING N N 30 RHT C7 H11 SING N N 31 RHT C10 H12 SING N N 32 RHT C13 H13 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RHT InChI InChI 1.03 "InChI=1S/C13H13N5/c1-18-7-16-10-3-2-8(4-11(10)18)9-5-12(14)17-13(15)6-9/h2-7H,1H3,(H4,14,15,17)" RHT InChIKey InChI 1.03 SOLATORCLYYKKR-UHFFFAOYSA-N RHT SMILES_CANONICAL CACTVS 3.385 "Cn1cnc2ccc(cc12)c3cc(N)nc(N)c3" RHT SMILES CACTVS 3.385 "Cn1cnc2ccc(cc12)c3cc(N)nc(N)c3" RHT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cnc2c1cc(cc2)c3cc(nc(c3)N)N" RHT SMILES "OpenEye OEToolkits" 2.0.7 "Cn1cnc2c1cc(cc2)c3cc(nc(c3)N)N" # _pdbx_chem_comp_identifier.comp_id RHT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(3-methylbenzimidazol-5-yl)pyridine-2,6-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RHT "Create component" 2020-09-30 PDBE RHT "Initial release" 2021-05-26 RCSB ##